RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 SMCPP49901 116 aaPredicted RBP12.86□□□□□ -0.35
PPP4R3A-208ENST00000555462 ZNF48Q96MX3 618 aaPredicted RBP12.86□□□□□ -0.35
PPP4R3A-208ENST00000555462 DPH3P1Q9H4G8 78 aa12.86□□□□□ -0.35
PPP4R3A-208ENST00000555462 F8W1H4 67 aa12.86□□□□□ -0.35
PPP4R3A-208ENST00000555462 K7ENP7 123 aa12.86□□□□□ -0.35
PPP4R3A-208ENST00000555462 IGHV4-38-2P0DP08 117 aa12.86□□□□□ -0.35
PPP4R3A-208ENST00000555462 RAB9AP51151 201 aa12.86□□□□□ -0.35
PPP4R3A-208ENST00000555462 C1orf122Q6ZSJ8 110 aa12.86□□□□□ -0.35
PPP4R3A-208ENST00000555462 MT-ATP8P03928 68 aa12.86□□□□□ -0.35
PPP4R3A-208ENST00000555462 RHPN1-AS1Q9BWJ2 59 aa12.86□□□□□ -0.35
PPP4R3A-208ENST00000555462 J3QR89 54 aa12.85□□□□□ -0.35
PPP4R3A-208ENST00000555462 C9orf47Q6ZRZ4 202 aa12.85□□□□□ -0.35
PPP4R3A-208ENST00000555462 TSPAN13O95857 204 aa12.85□□□□□ -0.35
PPP4R3A-208ENST00000555462 RNASE3P12724 160 aaKnown RBP12.85□□□□□ -0.35
PPP4R3A-208ENST00000555462 C5orf56Q8N8D9 126 aa12.85□□□□□ -0.35
PPP4R3A-208ENST00000555462 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 FHL3Q13643 280 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 ZNF56Q15929 161 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 CEMP1Q6PRD7 247 aaPredicted RBP12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 MAPK1IP1LQ8NDC0 245 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 TRAV2A0A0B4J234 112 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 H3BUX3 64 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 TSHBP01222 138 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 CRYGDP07320 174 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 UBE2E1P51965 193 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 ORMDL2Q53FV1 153 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 TOMM6Q96B49 74 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 CKS1BP61024 79 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 C11orf71Q6IPW1 123 aa12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 TRPT1Q86TN4 253 aaKnown RBP12.84□□□□□ -0.35
PPP4R3A-208ENST00000555462 KNCNA6PVL3 124 aa12.83□□□□□ -0.36
PPP4R3A-208ENST00000555462 MINOS1Q5TGZ0 78 aa12.83□□□□□ -0.36
PPP4R3A-208ENST00000555462 MINOS1-NBL1R4GNA1 71 aa12.83□□□□□ -0.36
PPP4R3A-208ENST00000555462 ACANP16112 2415 aa12.83□□□□□ -0.36
PPP4R3A-208ENST00000555462 P0DMU3 169 aa12.83□□□□□ -0.36
PPP4R3A-208ENST00000555462 FAM231AP0DMU4 169 aa12.83□□□□□ -0.36
PPP4R3A-208ENST00000555462 FAM231CP0DMU5 169 aa12.83□□□□□ -0.36
PPP4R3A-208ENST00000555462 CRIP2P52943 208 aaPredicted RBP12.83□□□□□ -0.36
PPP4R3A-208ENST00000555462 PRO0461Q9UI25 63 aa12.83□□□□□ -0.36
PPP4R3A-208ENST00000555462 C19orf84I3L1E1 186 aa12.82□□□□□ -0.36
PPP4R3A-208ENST00000555462 Q1RN00 199 aa12.82□□□□□ -0.36
PPP4R3A-208ENST00000555462 FAM159AQ6UWV7 190 aa12.82□□□□□ -0.36
PPP4R3A-208ENST00000555462 SDHAF1A6NFY7 115 aa12.82□□□□□ -0.36
PPP4R3A-208ENST00000555462 RNF223E7ERA6 249 aa12.82□□□□□ -0.36
PPP4R3A-208ENST00000555462 PRSS2P07478 247 aa12.82□□□□□ -0.36
PPP4R3A-208ENST00000555462 EBI3Q14213 229 aa12.82□□□□□ -0.36
PPP4R3A-208ENST00000555462 NRGNQ92686 78 aa12.82□□□□□ -0.36
PPP4R3A-208ENST00000555462 RBAKDNA6NC62 111 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 A8MZ25 164 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 TCL1BO95988 128 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 SUMO4Q6EEV6 95 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 ZNRF2Q8NHG8 242 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 TRBV7-1A0A0A6YYK4 115 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 SPINK8P0C7L1 97 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 PSMG4Q5JS54 123 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 IGHV4-39P01824 125 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 LMO4P61968 165 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 SPINK13Q1W4C9 94 aa12.81□□□□□ -0.36
PPP4R3A-208ENST00000555462 A0A0U1RRA0 63 aa12.8□□□□□ -0.36
PPP4R3A-208ENST00000555462 FOXI1Q12951 378 aa12.8□□□□□ -0.36
PPP4R3A-208ENST00000555462 MRAP2Q96G30 205 aa12.8□□□□□ -0.36
PPP4R3A-208ENST00000555462 Q9UF83 564 aa12.8□□□□□ -0.36
PPP4R3A-208ENST00000555462 NBEAL2Q6ZNJ1 2754 aa12.8□□□□□ -0.36
PPP4R3A-208ENST00000555462 TRAV26-1A0A087WT03 109 aa12.8□□□□□ -0.36
PPP4R3A-208ENST00000555462 Q6ZSV7 163 aa12.8□□□□□ -0.36
PPP4R3A-208ENST00000555462 PROK1P58294 105 aa12.79□□□□□ -0.36
PPP4R3A-208ENST00000555462 DLX4Q92988 240 aaPredicted RBP12.79□□□□□ -0.36
PPP4R3A-208ENST00000555462 C9orf139Q6ZV77 190 aa12.79□□□□□ -0.36
PPP4R3A-208ENST00000555462 PIFOQ8TCI5 191 aa12.79□□□□□ -0.36
PPP4R3A-208ENST00000555462 SPXQ9BT56 116 aa12.79□□□□□ -0.36
PPP4R3A-208ENST00000555462 LINC01546A6NGU7 62 aa12.78□□□□□ -0.36
PPP4R3A-208ENST00000555462 ATP6V0BQ99437 205 aa12.78□□□□□ -0.36
PPP4R3A-208ENST00000555462 GATA3P23771 443 aa12.78□□□□□ -0.36
PPP4R3A-208ENST00000555462 XGP55808 180 aa12.78□□□□□ -0.36
PPP4R3A-208ENST00000555462 IGLV4-69A0A075B6H9 119 aa12.77□□□□□ -0.36
PPP4R3A-208ENST00000555462 ITLN2Q8WWU7 325 aaPredicted RBP12.77□□□□□ -0.36
PPP4R3A-208ENST00000555462 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.37
PPP4R3A-208ENST00000555462 A0A0J9YY99 117 aa12.77□□□□□ -0.37
PPP4R3A-208ENST00000555462 C9JAW5 83 aa12.77□□□□□ -0.37
PPP4R3A-208ENST00000555462 CIDEAO60543 219 aa12.77□□□□□ -0.37
PPP4R3A-208ENST00000555462 CFC1BP0CG36 223 aa12.77□□□□□ -0.37
PPP4R3A-208ENST00000555462 CFC1P0CG37 223 aa12.77□□□□□ -0.37
PPP4R3A-208ENST00000555462 A0A0J9YXV3 536 aa12.76□□□□□ -0.37
PPP4R3A-208ENST00000555462 SRSF2Q01130 221 aaKnown RBP12.76□□□□□ -0.37
PPP4R3A-208ENST00000555462 A4D1N5 150 aa12.76□□□□□ -0.37
PPP4R3A-208ENST00000555462 ELANEP08246 267 aa12.76□□□□□ -0.37
PPP4R3A-208ENST00000555462 CFAP126Q5VTH2 177 aa12.76□□□□□ -0.37
PPP4R3A-208ENST00000555462 NDUFA11Q86Y39 141 aa12.76□□□□□ -0.37
PPP4R3A-208ENST00000555462 CARD19Q96LW7 228 aa12.76□□□□□ -0.37
PPP4R3A-208ENST00000555462 ZNF462Q96JM2 2506 aa12.75□□□□□ -0.37
PPP4R3A-208ENST00000555462 MOB4Q9Y3A3 225 aa12.75□□□□□ -0.37
PPP4R3A-208ENST00000555462 TRAV8-3A0A0A6YYJ7 113 aa12.75□□□□□ -0.37
PPP4R3A-208ENST00000555462 LGALS3P17931 250 aaKnown RBP12.75□□□□□ -0.37
PPP4R3A-208ENST00000555462 DAND5Q8N907 189 aa12.75□□□□□ -0.37
PPP4R3A-208ENST00000555462 DUX3Q96PT4 197 aa12.75□□□□□ -0.37
PPP4R3A-208ENST00000555462 TRAV12-1A0A0B4J245 112 aa12.74□□□□□ -0.37
PPP4R3A-208ENST00000555462 OOSP1A8MZH6 123 aa12.74□□□□□ -0.37
PPP4R3A-208ENST00000555462 CDIP1Q9H305 208 aa12.74□□□□□ -0.37
PPP4R3A-208ENST00000555462 GEMIN7Q9H840 131 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms