RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 WNK2Q9Y3S1 2297 aa8.66□□□□□ -1.02
DDB1-224ENST00000545894 TRAV41A0A0B4J266 112 aa8.66□□□□□ -1.02
DDB1-224ENST00000545894 PRSS29PA6NIE9 313 aa8.66□□□□□ -1.02
DDB1-224ENST00000545894 SPRY2O43597 315 aa8.66□□□□□ -1.02
DDB1-224ENST00000545894 MGPP08493 103 aa8.66□□□□□ -1.02
DDB1-224ENST00000545894 MED14OSP0DP75 135 aa8.66□□□□□ -1.02
DDB1-224ENST00000545894 SPAG8Q99932 426 aaPredicted RBP8.66□□□□□ -1.02
DDB1-224ENST00000545894 J3QLI3 93 aa8.65□□□□□ -1.02
DDB1-224ENST00000545894 NPFFO15130 113 aa8.65□□□□□ -1.02
DDB1-224ENST00000545894 PPP1R17O96001 155 aa8.65□□□□□ -1.02
DDB1-224ENST00000545894 ARL3P36405 182 aa8.65□□□□□ -1.02
DDB1-224ENST00000545894 SMAGPQ0VAQ4 97 aa8.65□□□□□ -1.02
DDB1-224ENST00000545894 ANXA2RQ3ZCQ2 193 aa8.65□□□□□ -1.02
DDB1-224ENST00000545894 MORN3Q6PF18 240 aaPredicted RBP8.65□□□□□ -1.02
DDB1-224ENST00000545894 GPHB5Q86YW7 130 aa8.65□□□□□ -1.02
DDB1-224ENST00000545894 SPATA25Q9BR10 227 aa8.65□□□□□ -1.02
DDB1-224ENST00000545894 YAE1D1Q9NRH1 226 aa8.65□□□□□ -1.02
DDB1-224ENST00000545894 ZANQ9Y493 2812 aa8.65□□□□□ -1.03
DDB1-224ENST00000545894 TMEM238LA0A1B0GVL6 79 aa8.65□□□□□ -1.03
DDB1-224ENST00000545894 A6NJY4 79 aa8.65□□□□□ -1.03
DDB1-224ENST00000545894 ZNF815PA8K554 130 aa8.65□□□□□ -1.03
DDB1-224ENST00000545894 SOCS3O14543 225 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 CIDEAO60543 219 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 C19orf54Q5BKX5 351 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 MTURNQ8N3F0 131 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 FLNAP21333 2647 aaKnown RBP8.64□□□□□ -1.03
DDB1-224ENST00000545894 ANK3Q12955 4377 aaKnown RBP8.64□□□□□ -1.03
DDB1-224ENST00000545894 MED13LQ71F56 2210 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 AGRNO00468 2067 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 UNQ9165/PRO28630Q6UXU0 137 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 SCGB1D4Q6XE38 83 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 TMEM219Q86XT9 240 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 MRPL16Q9NX20 251 aaKnown RBP8.64□□□□□ -1.03
DDB1-224ENST00000545894 MOB4Q9Y3A3 225 aa8.64□□□□□ -1.03
DDB1-224ENST00000545894 IGHV3OR16-10A0A075B7F0 116 aa8.63□□□□□ -1.03
DDB1-224ENST00000545894 NDUFA4O00483 81 aa8.63□□□□□ -1.03
DDB1-224ENST00000545894 RNASE4P34096 147 aaKnown RBP8.63□□□□□ -1.03
DDB1-224ENST00000545894 FAM19A4Q96LR4 140 aa8.63□□□□□ -1.03
DDB1-224ENST00000545894 LINC00527Q9UJ94 153 aa8.63□□□□□ -1.03
DDB1-224ENST00000545894 CRIP2P52943 208 aaPredicted RBP8.63□□□□□ -1.03
DDB1-224ENST00000545894 DEFB1P60022 68 aa8.63□□□□□ -1.03
DDB1-224ENST00000545894 GNRH2O43555 120 aa8.62□□□□□ -1.03
DDB1-224ENST00000545894 IGHV4-38-2P0DP08 117 aa8.62□□□□□ -1.03
DDB1-224ENST00000545894 RNASE3P12724 160 aaKnown RBP8.62□□□□□ -1.03
DDB1-224ENST00000545894 SRSF9Q13242 221 aaKnown RBP eCLIP8.62□□□□□ -1.03
DDB1-224ENST00000545894 LCNL1Q6ZST4 164 aa8.62□□□□□ -1.03
DDB1-224ENST00000545894 APRG1Q8IVJ8 170 aa8.62□□□□□ -1.03
DDB1-224ENST00000545894 POM121L12Q8N7R1 296 aa8.62□□□□□ -1.03
DDB1-224ENST00000545894 PLEKHB2Q96CS7 222 aa8.62□□□□□ -1.03
DDB1-224ENST00000545894 HIVEP1P15822 2718 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 IGHV1-69DA0A0B4J2H0 117 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 LINC01549A6NIU2 74 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 DUSP14O95147 198 aaKnown RBP8.61□□□□□ -1.03
DDB1-224ENST00000545894 TRBV12-3P01733 135 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 UBE2D1P51668 147 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 DLX4Q92988 240 aaPredicted RBP8.61□□□□□ -1.03
DDB1-224ENST00000545894 TRBV7-9A0A0J9YWB2 115 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 NXPH4O95158 308 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 APOMO95445 188 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 FSHBP01225 129 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 CRYGDP07320 174 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 INSL3P51460 131 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 HERVK_113P61574 105 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
DDB1-224ENST00000545894 PAPPA-AS1Q5QFB9 102 aa8.61□□□□□ -1.03
DDB1-224ENST00000545894 F6UB75 175 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 IGHV1-69P01742 117 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
DDB1-224ENST00000545894 CFAP126Q5VTH2 177 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 IGHV4OR15-8A0A075B7B6 117 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 A0A087WW49 117 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 C11orf86A6NJI1 115 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 TSPAN13O95857 204 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 BRD3OSQ6XYD6 125 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 KLHL30-AS1Q8NEE0 82 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 ATP6V0E2Q8NHE4 81 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 C1QTNF4Q9BXJ3 329 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 TP53TG1Q9Y2A0 90 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 KIF25-AS1Q9Y6Z4 181 aa8.6□□□□□ -1.03
DDB1-224ENST00000545894 CREBBPQ92793 2442 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 ZFHX3Q15911 3703 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 IGIPA6NJ69 53 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 TSHBP01222 138 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 LINC00315P59091 139 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 PMVKQ15126 192 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 ACANP16112 2415 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 LOC107984156A0A0G2JMH3 177 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 CD7P09564 240 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 FOXI1Q12951 378 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 ARL17AQ8IVW1 177 aa8.59□□□□□ -1.03
DDB1-224ENST00000545894 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.58□□□□□ -1.041e-10■■□□□ 12.3
DDB1-224ENST00000545894 A0A0J9YY99 117 aa8.58□□□□□ -1.04
DDB1-224ENST00000545894 INAFM1C9JVW0 142 aa8.58□□□□□ -1.04
DDB1-224ENST00000545894 PSMB2P49721 201 aa8.58□□□□□ -1.04
DDB1-224ENST00000545894 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
DDB1-224ENST00000545894 POLR2KP53803 58 aaKnown RBP8.58□□□□□ -1.04
DDB1-224ENST00000545894 UBE2D3P61077 147 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms