RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 DPH3Q96FX2 82 aa8.67□□□□□ -1.02
CDH4-201ENST00000543233 KLRB1Q12918 225 aa8.67□□□□□ -1.02
CDH4-201ENST00000543233 EEF1AKMT3Q96AZ1 226 aa8.67□□□□□ -1.02
CDH4-201ENST00000543233 IGKV1D-37A0A075B6S9 117 aa8.66□□□□□ -1.02
CDH4-201ENST00000543233 BUB1B-PAK6H3BSN5 160 aa8.66□□□□□ -1.02
CDH4-201ENST00000543233 RS1O15537 224 aa8.66□□□□□ -1.02
CDH4-201ENST00000543233 ELANEP08246 267 aa8.66□□□□□ -1.02
CDH4-201ENST00000543233 ADORA2A-AS1P86434 159 aa8.66□□□□□ -1.02
CDH4-201ENST00000543233 CHD6Q8TD26 2715 aa8.66□□□□□ -1.02
CDH4-201ENST00000543233 CRIP1P50238 77 aa8.66□□□□□ -1.02
CDH4-201ENST00000543233 KAAG1Q9UBP8 84 aa8.66□□□□□ -1.02
CDH4-201ENST00000543233 TRBV10-2A0A0K0K1G8 114 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 OXTP01178 125 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 LAGE3Q14657 143 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 CRYBG3Q68DQ2 2970 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 POM121L12Q8N7R1 296 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 VPS13CQ709C8 3753 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 IGHV3OR16-8A0A075B7F1 116 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 IGLV2-11P01706 119 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 MRGPRG-AS1Q2M3A8 158 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 LINC01559Q495D7 138 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 Q6ZS46 218 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 SCGB3A1Q96QR1 104 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 V9GYY9 64 aa8.65□□□□□ -1.02
CDH4-201ENST00000543233 TRAV13-1A0A0B4J241 112 aa8.65□□□□□ -1.03
CDH4-201ENST00000543233 IGHV3-35A0A0C4DH35 117 aa8.65□□□□□ -1.03
CDH4-201ENST00000543233 ZNF785A8K8V0 405 aa8.65□□□□□ -1.03
CDH4-201ENST00000543233 M0R3E3 92 aa8.65□□□□□ -1.03
CDH4-201ENST00000543233 SH2D1AO60880 128 aa8.65□□□□□ -1.03
CDH4-201ENST00000543233 IGHV3-23P01764 117 aa8.65□□□□□ -1.03
CDH4-201ENST00000543233 MALP21145 153 aa8.65□□□□□ -1.03
CDH4-201ENST00000543233 LINC00311Q8N616 119 aa8.65□□□□□ -1.03
CDH4-201ENST00000543233 Q8N8P6 123 aa8.65□□□□□ -1.03
CDH4-201ENST00000543233 CYSTM1Q9H1C7 97 aa8.65□□□□□ -1.03
CDH4-201ENST00000543233 IGLV1-47P01700 117 aa8.64□□□□□ -1.03
CDH4-201ENST00000543233 GP9P14770 177 aa8.64□□□□□ -1.03
CDH4-201ENST00000543233 IL17RELQ6ZVW7 336 aa8.64□□□□□ -1.03
CDH4-201ENST00000543233 SLC25A39Q9BZJ4 359 aaPredicted RBP8.64□□□□□ -1.03
CDH4-201ENST00000543233 PRO0628Q9UI54 55 aa8.64□□□□□ -1.03
CDH4-201ENST00000543233 TRAV26-2A0A0B4J265 109 aa8.64□□□□□ -1.03
CDH4-201ENST00000543233 A0A0U1RQV1 116 aa8.64□□□□□ -1.03
CDH4-201ENST00000543233 Q5XG85 94 aa8.64□□□□□ -1.03
CDH4-201ENST00000543233 PYGO1Q9Y3Y4 419 aa8.64□□□□□ -1.03
CDH4-201ENST00000543233 NOTCH3Q9UM47 2321 aa8.64□□□□□ -1.03
CDH4-201ENST00000543233 UTP20O75691 2785 aaKnown RBP8.63□□□□□ -1.03
CDH4-201ENST00000543233 CREBBPQ92793 2442 aa8.63□□□□□ -1.03
CDH4-201ENST00000543233 USP9XQ93008 2570 aaPredicted RBP8.63□□□□□ -1.03
CDH4-201ENST00000543233 LRRK2Q5S007 2527 aa8.63□□□□□ -1.03
CDH4-201ENST00000543233 SPRY2O43597 315 aa8.63□□□□□ -1.03
CDH4-201ENST00000543233 FAM19A4Q96LR4 140 aa8.63□□□□□ -1.03
CDH4-201ENST00000543233 C17orf77Q96MU5 243 aa8.63□□□□□ -1.03
CDH4-201ENST00000543233 FSTL3O95633 263 aa8.63□□□□□ -1.03
CDH4-201ENST00000543233 EBI3Q14213 229 aa8.63□□□□□ -1.03
CDH4-201ENST00000543233 TMEM75Q8N9X5 138 aa8.63□□□□□ -1.03
CDH4-201ENST00000543233 ZNF462Q96JM2 2506 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 ZFHX3Q15911 3703 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 LINC00336Q6ZUF6 198 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 A0A0J9YY99 117 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 FAM236DA0A1B0GTK5 79 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 A0A1W2PPR1 153 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 IGHV3-33P01772 117 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 FAM236CP0DP71 79 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 PFN2P35080 140 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 TMEM258P61165 79 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 METTL26Q96S19 204 aa8.62□□□□□ -1.03
CDH4-201ENST00000543233 DTX2Q86UW9 622 aa8.61□□□□□ -1.03
CDH4-201ENST00000543233 RNF185Q96GF1 192 aa8.61□□□□□ -1.03
CDH4-201ENST00000543233 PRR25Q96S07 402 aa8.61□□□□□ -1.03
CDH4-201ENST00000543233 DOPEY2Q9Y3R5 2298 aa8.61□□□□□ -1.03
CDH4-201ENST00000543233 IGHV3-30P01768 117 aa8.61□□□□□ -1.03
CDH4-201ENST00000543233 IGHV3-30-5P0DP03 117 aa8.61□□□□□ -1.03
CDH4-201ENST00000543233 CRYGAP11844 174 aa8.61□□□□□ -1.03
CDH4-201ENST00000543233 WFDC11Q8NEX6 87 aa8.61□□□□□ -1.03
CDH4-201ENST00000543233 TEX22C9J3V5 150 aa8.6□□□□□ -1.03
CDH4-201ENST00000543233 TRAV8-3A0A0A6YYJ7 113 aa8.6□□□□□ -1.03
CDH4-201ENST00000543233 C8orf31Q8N9H6 132 aa8.6□□□□□ -1.03
CDH4-201ENST00000543233 DPM3Q9P2X0 92 aa8.6□□□□□ -1.03
CDH4-201ENST00000543233 IGHV3OR16-10A0A075B7F0 116 aa8.6□□□□□ -1.03
CDH4-201ENST00000543233 Q8TAT8 98 aa8.6□□□□□ -1.03
CDH4-201ENST00000543233 DEFB104AQ8WTQ1 72 aa8.6□□□□□ -1.03
CDH4-201ENST00000543233 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
CDH4-201ENST00000543233 TLN2Q9Y4G6 2542 aa8.6□□□□□ -1.03
CDH4-201ENST00000543233 CSMD2Q7Z408 3487 aa8.59□□□□□ -1.03
CDH4-201ENST00000543233 CLEC2BQ92478 149 aa8.59□□□□□ -1.03
CDH4-201ENST00000543233 IMUPQ9GZP8 106 aa8.59□□□□□ -1.03
CDH4-201ENST00000543233 H7C423 109 aa8.59□□□□□ -1.03
CDH4-201ENST00000543233 EGR2P11161 476 aaPredicted RBP8.59□□□□□ -1.03
CDH4-201ENST00000543233 DYNAPQ8N1N2 210 aa8.59□□□□□ -1.03
CDH4-201ENST00000543233 THAP8Q8NA92 274 aa8.59□□□□□ -1.03
CDH4-201ENST00000543233 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
CDH4-201ENST00000543233 TRIAP1O43715 76 aa8.58□□□□□ -1.04
CDH4-201ENST00000543233 C14orf178Q8N769 122 aaPredicted RBP8.58□□□□□ -1.04
CDH4-201ENST00000543233 CELSR2Q9HCU4 2923 aa8.58□□□□□ -1.04
CDH4-201ENST00000543233 FAM240AA0A1B0GVK7 77 aa8.58□□□□□ -1.04
CDH4-201ENST00000543233 ZFP36P26651 326 aaKnown RBP8.58□□□□□ -1.04
CDH4-201ENST00000543233 NACAE9PAV3 2078 aa8.58□□□□□ -1.04
CDH4-201ENST00000543233 IGKV2-40A0A087WW87 121 aaPredicted RBP8.58□□□□□ -1.04
CDH4-201ENST00000543233 ATOX1O00244 68 aa8.58□□□□□ -1.04
CDH4-201ENST00000543233 NBR2O15453 112 aa8.58□□□□□ -1.04
CDH4-201ENST00000543233 IGKV2D-40P01614 121 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms