RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 TAX1BP3O14907 124 aa12.33□□□□□ -0.43
VARS2-212ENST00000542001 TRGV11A0A075B6L2 103 aa12.33□□□□□ -0.44
VARS2-212ENST00000542001 HOXD3P31249 432 aaPredicted RBP12.33□□□□□ -0.44
VARS2-212ENST00000542001 CIRBPQ14011 172 aaKnown RBP12.33□□□□□ -0.44
VARS2-212ENST00000542001 DMXL1Q9Y485 3027 aa12.33□□□□□ -0.44
VARS2-212ENST00000542001 ODF3BA8MYP8 253 aa12.33□□□□□ -0.44
VARS2-212ENST00000542001 TMEM238C9JI98 176 aa12.33□□□□□ -0.44
VARS2-212ENST00000542001 PAX2Q02962 417 aa12.33□□□□□ -0.44
VARS2-212ENST00000542001 FBXL19-AS1Q494R0 122 aa12.33□□□□□ -0.44
VARS2-212ENST00000542001 OPRPNQ99935 248 aaPredicted RBP12.33□□□□□ -0.44
VARS2-212ENST00000542001 COL12A1Q99715 3063 aa12.33□□□□□ -0.44
VARS2-212ENST00000542001 IGHV1OR15-1A0A075B7D0 117 aa12.32□□□□□ -0.44
VARS2-212ENST00000542001 TRAV8-2A0A0B4J237 113 aa12.32□□□□□ -0.44
VARS2-212ENST00000542001 TRGV4A0A0C4DH28 118 aa12.32□□□□□ -0.44
VARS2-212ENST00000542001 DEFB130BP0DP73 79 aa12.32□□□□□ -0.44
VARS2-212ENST00000542001 DEFB130AP0DP74 79 aa12.32□□□□□ -0.44
VARS2-212ENST00000542001 OR5A1Q8NGJ0 315 aa12.32□□□□□ -0.44
VARS2-212ENST00000542001 CHCHD5Q9BSY4 110 aa12.31□□□□□ -0.44
VARS2-212ENST00000542001 RAI1Q7Z5J4 1906 aaPredicted RBP12.31□□□□□ -0.44
VARS2-212ENST00000542001 C10orf105Q8TEF2 133 aa12.31□□□□□ -0.44
VARS2-212ENST00000542001 H3BRM9 83 aa12.31□□□□□ -0.44
VARS2-212ENST00000542001 C16orf54Q6UWD8 224 aa12.31□□□□□ -0.44
VARS2-212ENST00000542001 CTRLP40313 264 aa12.3□□□□□ -0.44
VARS2-212ENST00000542001 SH2D6Q7Z4S9 175 aa12.3□□□□□ -0.44
VARS2-212ENST00000542001 MDFICQ9P1T7 246 aa12.3□□□□□ -0.44
VARS2-212ENST00000542001 NDUFS8O00217 210 aa12.3□□□□□ -0.44
VARS2-212ENST00000542001 URB1-AS1Q96HZ7 61 aa12.3□□□□□ -0.44
VARS2-212ENST00000542001 PRM2P04554 102 aa12.3□□□□□ -0.44
VARS2-212ENST00000542001 TMEM190Q8WZ59 177 aa12.3□□□□□ -0.44
VARS2-212ENST00000542001 C20orf173Q96LM9 149 aa12.3□□□□□ -0.44
VARS2-212ENST00000542001 GAGE12JA6NER3 117 aa12.29□□□□□ -0.44
VARS2-212ENST00000542001 GAGE4Q13068 117 aa12.29□□□□□ -0.44
VARS2-212ENST00000542001 GAGE5Q13069 117 aa12.29□□□□□ -0.44
VARS2-212ENST00000542001 C11orf21Q9P2W6 132 aa12.29□□□□□ -0.44
VARS2-212ENST00000542001 A0A1W2PPM0 123 aa12.29□□□□□ -0.44
VARS2-212ENST00000542001 TNFRSF13BO14836 293 aaPredicted RBP12.29□□□□□ -0.44
VARS2-212ENST00000542001 RBX1P62877 108 aa12.29□□□□□ -0.44
VARS2-212ENST00000542001 LINC01559Q495D7 138 aa12.29□□□□□ -0.44
VARS2-212ENST00000542001 ERG28Q9UKR5 140 aa12.29□□□□□ -0.44
VARS2-212ENST00000542001 A0A087WX48 190 aa12.28□□□□□ -0.44
VARS2-212ENST00000542001 MYMXA0A1B0GTQ4 84 aa12.28□□□□□ -0.44
VARS2-212ENST00000542001 TSSC4Q9Y5U2 329 aaPredicted RBP12.28□□□□□ -0.44
VARS2-212ENST00000542001 USP24Q9UPU5 2620 aa12.28□□□□□ -0.44
VARS2-212ENST00000542001 IGKV2D-26A0A0A0MRZ7 120 aa12.28□□□□□ -0.44
VARS2-212ENST00000542001 HIST2H2BCQ6DN03 193 aa12.28□□□□□ -0.44
VARS2-212ENST00000542001 PMVKQ15126 192 aa12.28□□□□□ -0.44
VARS2-212ENST00000542001 ZNRF2Q8NHG8 242 aa12.27□□□□□ -0.44
VARS2-212ENST00000542001 IGHV4OR15-8A0A075B7B6 117 aa12.27□□□□□ -0.45
VARS2-212ENST00000542001 A0A087WW49 117 aa12.27□□□□□ -0.45
VARS2-212ENST00000542001 EDN2P20800 178 aa12.27□□□□□ -0.45
VARS2-212ENST00000542001 CKS1BP61024 79 aa12.27□□□□□ -0.45
VARS2-212ENST00000542001 Q8N1Y9 231 aa12.27□□□□□ -0.45
VARS2-212ENST00000542001 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.27□□□□□ -0.45
VARS2-212ENST00000542001 IGKV2-29A2NJV5 120 aaPredicted RBP12.27□□□□□ -0.45
VARS2-212ENST00000542001 ODF1Q14990 250 aa12.27□□□□□ -0.45
VARS2-212ENST00000542001 Q8N976 141 aa12.27□□□□□ -0.45
VARS2-212ENST00000542001 SUMO4Q6EEV6 95 aa12.27□□□□□ -0.45
VARS2-212ENST00000542001 A0A096LPF7 62 aa12.26□□□□□ -0.45
VARS2-212ENST00000542001 C9JAW5 83 aa12.26□□□□□ -0.45
VARS2-212ENST00000542001 CEND1Q8N111 149 aa12.26□□□□□ -0.45
VARS2-212ENST00000542001 TMEM101Q96IK0 257 aa12.26□□□□□ -0.45
VARS2-212ENST00000542001 TIMM21Q9BVV7 248 aa12.26□□□□□ -0.45
VARS2-212ENST00000542001 A0A0J9YXV3 536 aa12.26□□□□□ -0.45
VARS2-212ENST00000542001 ZNF415Q09FC8 603 aa12.26□□□□□ -0.45
VARS2-212ENST00000542001 C12orf74Q32Q52 190 aa12.26□□□□□ -0.45
VARS2-212ENST00000542001 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
VARS2-212ENST00000542001 DSCR9P59020 149 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 ZFAND3Q9H8U3 227 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 LRBAP50851 2863 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 GAGE7O76087 117 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 GAGE12FP0CL80 117 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 GAGE12GP0CL81 117 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 GAGE12IP0CL82 117 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 P0DMU3 169 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 FAM231AP0DMU4 169 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 FAM231CP0DMU5 169 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 PRR9Q5T870 116 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 C11orf71Q6IPW1 123 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 GATD1Q8NB37 220 aa12.25□□□□□ -0.45
VARS2-212ENST00000542001 A8MWV9 139 aa12.24□□□□□ -0.45
VARS2-212ENST00000542001 K7EP34 96 aa12.24□□□□□ -0.45
VARS2-212ENST00000542001 MRGPRG-AS1Q2M3A8 158 aa12.24□□□□□ -0.45
VARS2-212ENST00000542001 TRPT1Q86TN4 253 aaKnown RBP12.24□□□□□ -0.45
VARS2-212ENST00000542001 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
VARS2-212ENST00000542001 AZU1P20160 251 aa12.23□□□□□ -0.45
VARS2-212ENST00000542001 DCHS1Q96JQ0 3298 aa12.23□□□□□ -0.45
VARS2-212ENST00000542001 TEX48A0A1B0GUV7 120 aa12.23□□□□□ -0.45
VARS2-212ENST00000542001 WFDC2Q14508 124 aa12.23□□□□□ -0.45
VARS2-212ENST00000542001 DLX4Q92988 240 aaPredicted RBP12.23□□□□□ -0.45
VARS2-212ENST00000542001 IGHG2P01859 326 aa12.22□□□□□ -0.45
VARS2-212ENST00000542001 SPINK8P0C7L1 97 aa12.22□□□□□ -0.45
VARS2-212ENST00000542001 C9orf47Q6ZRZ4 202 aa12.22□□□□□ -0.45
VARS2-212ENST00000542001 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
VARS2-212ENST00000542001 RBAKDNA6NC62 111 aa12.22□□□□□ -0.45
VARS2-212ENST00000542001 J3QQQ9 107 aa12.22□□□□□ -0.45
VARS2-212ENST00000542001 INSP01308 110 aa12.22□□□□□ -0.45
VARS2-212ENST00000542001 RPL36AP83881 106 aaKnown RBP12.22□□□□□ -0.45
VARS2-212ENST00000542001 RPL36ALQ969Q0 106 aaKnown RBP12.22□□□□□ -0.45
VARS2-212ENST00000542001 BOD1L2Q8IYS8 172 aa12.22□□□□□ -0.45
VARS2-212ENST00000542001 LINC01619G3V211 115 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms