RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CXCL5P42830 114 aa9.7□□□□□ -0.86
DDX55-206ENST00000539934 KRTAP24-1Q3LI83 254 aa9.7□□□□□ -0.86
DDX55-206ENST00000539934 SPINK9Q5DT21 86 aa9.7□□□□□ -0.86
DDX55-206ENST00000539934 C11orf71Q6IPW1 123 aa9.7□□□□□ -0.86
DDX55-206ENST00000539934 MRPL55Q7Z7F7 128 aaKnown RBP9.7□□□□□ -0.86
DDX55-206ENST00000539934 Q8N1Y9 231 aa9.7□□□□□ -0.86
DDX55-206ENST00000539934 MEGF8Q7Z7M0 2845 aa9.69□□□□□ -0.86
DDX55-206ENST00000539934 TRBV25-1A0A075B6N4 114 aa9.69□□□□□ -0.86
DDX55-206ENST00000539934 LGALS9O00182 355 aa9.69□□□□□ -0.86
DDX55-206ENST00000539934 SPINK4O60575 86 aa9.69□□□□□ -0.86
DDX55-206ENST00000539934 TMEM155Q4W5P6 130 aa9.69□□□□□ -0.86
DDX55-206ENST00000539934 C10orf105Q8TEF2 133 aa9.69□□□□□ -0.86
DDX55-206ENST00000539934 SMIM26A0A096LP01 95 aa9.68□□□□□ -0.86
DDX55-206ENST00000539934 HOXA3O43365 443 aaPredicted RBP9.68□□□□□ -0.86
DDX55-206ENST00000539934 FSTL3O95633 263 aa9.68□□□□□ -0.86
DDX55-206ENST00000539934 PIP4P2Q8N4L2 257 aa9.68□□□□□ -0.86
DDX55-206ENST00000539934 TET2Q6N021 2002 aaPredicted RBP9.68□□□□□ -0.86
DDX55-206ENST00000539934 H3BS24 57 aa9.68□□□□□ -0.86
DDX55-206ENST00000539934 GP9P14770 177 aa9.68□□□□□ -0.86
DDX55-206ENST00000539934 NPC2P61916 151 aa9.68□□□□□ -0.86
DDX55-206ENST00000539934 HIST1H4AP62805 103 aaKnown RBP9.68□□□□□ -0.86
DDX55-206ENST00000539934 CEMP1Q6PRD7 247 aaPredicted RBP9.68□□□□□ -0.86
DDX55-206ENST00000539934 ZNF833PQ6ZTB9 187 aa9.68□□□□□ -0.86
DDX55-206ENST00000539934 PLEKHA3Q9HB20 300 aa9.68□□□□□ -0.86
DDX55-206ENST00000539934 SLC25A20O43772 301 aa9.67□□□□□ -0.86
DDX55-206ENST00000539934 IGHV1-8P0DP01 117 aa9.67□□□□□ -0.86
DDX55-206ENST00000539934 MYCNOSP40205 109 aa9.67□□□□□ -0.86
DDX55-206ENST00000539934 PDPNQ86YL7 162 aa9.67□□□□□ -0.86
DDX55-206ENST00000539934 UPK3BQ9BT76 320 aa9.67□□□□□ -0.86
DDX55-206ENST00000539934 MGAM2Q2M2H8 2515 aa9.67□□□□□ -0.86
DDX55-206ENST00000539934 TRAV3A0A0B4J244 114 aa9.67□□□□□ -0.86
DDX55-206ENST00000539934 C19orf71A6NCJ1 209 aa9.67□□□□□ -0.86
DDX55-206ENST00000539934 SRSF9Q13242 221 aaKnown RBP eCLIP9.67□□□□□ -0.861e-6■■■■□ 21.5
DDX55-206ENST00000539934 RITA1Q96K30 269 aa9.67□□□□□ -0.86
DDX55-206ENST00000539934 NXT2Q9NPJ8 142 aaKnown RBP9.67□□□□□ -0.86
DDX55-206ENST00000539934 LAMTOR3Q9UHA4 124 aa9.67□□□□□ -0.86
DDX55-206ENST00000539934 MALRD1Q5VYJ5 2156 aa9.66□□□□□ -0.86
DDX55-206ENST00000539934 H3BT86 120 aa9.66□□□□□ -0.86
DDX55-206ENST00000539934 MGST2Q99735 147 aa9.66□□□□□ -0.86
DDX55-206ENST00000539934 UBE2L5PA0A1B0GUS4 154 aa9.66□□□□□ -0.86
DDX55-206ENST00000539934 SCO2A0A1W2PP80 73 aa9.66□□□□□ -0.86
DDX55-206ENST00000539934 GDF5OSQ5U4N7 250 aa9.66□□□□□ -0.86
DDX55-206ENST00000539934 PRR15Q8IV56 129 aa9.66□□□□□ -0.86
DDX55-206ENST00000539934 TRGV9Q99603 122 aa9.66□□□□□ -0.86
DDX55-206ENST00000539934 SLC25A2Q9BXI2 301 aa9.66□□□□□ -0.86
DDX55-206ENST00000539934 TMSB15BA0A087X1C1 80 aa9.65□□□□□ -0.86
DDX55-206ENST00000539934 NCBP2LA6PVI3 153 aaKnown RBP9.65□□□□□ -0.86
DDX55-206ENST00000539934 IGKV1-16P04430 117 aa9.65□□□□□ -0.86
DDX55-206ENST00000539934 ZNF56Q15929 161 aa9.65□□□□□ -0.86
DDX55-206ENST00000539934 CYSTM1Q9H1C7 97 aa9.65□□□□□ -0.86
DDX55-206ENST00000539934 LTAP01374 205 aa9.64□□□□□ -0.87
DDX55-206ENST00000539934 TMEM170BQ5T4T1 132 aa9.64□□□□□ -0.87
DDX55-206ENST00000539934 C11orf45Q8TAV5 145 aa9.64□□□□□ -0.87
DDX55-206ENST00000539934 SRSF12Q8WXF0 261 aaKnown RBP9.64□□□□□ -0.87
DDX55-206ENST00000539934 TRBV7-3A0A075B6L6 115 aa9.64□□□□□ -0.87
DDX55-206ENST00000539934 PGPA6NDG6 321 aa9.64□□□□□ -0.87
DDX55-206ENST00000539934 VPREB1P12018 145 aa9.64□□□□□ -0.87
DDX55-206ENST00000539934 HOXD3P31249 432 aaPredicted RBP9.64□□□□□ -0.87
DDX55-206ENST00000539934 A0A1B0GXF2 115 aa9.63□□□□□ -0.87
DDX55-206ENST00000539934 PMS2P5A8MQ11 134 aa9.63□□□□□ -0.87
DDX55-206ENST00000539934 H3BVH4 76 aa9.63□□□□□ -0.87
DDX55-206ENST00000539934 UBE2L3P68036 154 aaKnown RBP9.63□□□□□ -0.87
DDX55-206ENST00000539934 PKD1L1Q8TDX9 2849 aa9.63□□□□□ -0.87
DDX55-206ENST00000539934 ACYP1P07311 99 aa9.63□□□□□ -0.87
DDX55-206ENST00000539934 MFAP2P55001 183 aa9.63□□□□□ -0.87
DDX55-206ENST00000539934 RNF182Q8N6D2 247 aa9.63□□□□□ -0.87
DDX55-206ENST00000539934 NABP2Q9BQ15 211 aa9.63□□□□□ -0.87
DDX55-206ENST00000539934 SRRM4A7MD48 611 aaKnown RBP9.62□□□□□ -0.87
DDX55-206ENST00000539934 SAA1P0DJI8 122 aaPredicted RBP9.62□□□□□ -0.87
DDX55-206ENST00000539934 UBE2E1P51965 193 aa9.62□□□□□ -0.87
DDX55-206ENST00000539934 ZNF137PP52743 207 aa9.62□□□□□ -0.87
DDX55-206ENST00000539934 PRB3Q04118 309 aaPredicted RBP9.62□□□□□ -0.87
DDX55-206ENST00000539934 C5orf38Q86SI9 138 aa9.62□□□□□ -0.87
DDX55-206ENST00000539934 FMC1Q96HJ9 113 aa9.62□□□□□ -0.87
DDX55-206ENST00000539934 UBE2E2Q96LR5 201 aa9.62□□□□□ -0.87
DDX55-206ENST00000539934 TMEM14BQ9NUH8 114 aa9.62□□□□□ -0.87
DDX55-206ENST00000539934 UPK2O00526 184 aa9.62□□□□□ -0.87
DDX55-206ENST00000539934 COX7A1P24310 79 aa9.62□□□□□ -0.87
DDX55-206ENST00000539934 DEFB121Q5J5C9 76 aa9.62□□□□□ -0.87
DDX55-206ENST00000539934 IGF2BP2-AS1Q96M15 143 aa9.62□□□□□ -0.87
DDX55-206ENST00000539934 TRRAPQ9Y4A5 3859 aa9.61□□□□□ -0.87
DDX55-206ENST00000539934 LOC107984156A0A0G2JMH3 177 aa9.61□□□□□ -0.87
DDX55-206ENST00000539934 TCRAP04437 139 aa9.61□□□□□ -0.87
DDX55-206ENST00000539934 HERVK_113P61574 105 aa9.61□□□□□ -0.87
DDX55-206ENST00000539934 ARL17AQ8IVW1 177 aa9.61□□□□□ -0.87
DDX55-206ENST00000539934 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
DDX55-206ENST00000539934 AMMECR1Q9Y4X0 333 aaPredicted RBP9.61□□□□□ -0.87
DDX55-206ENST00000539934 ARHGAP32A7KAX9 2087 aa9.61□□□□□ -0.87
DDX55-206ENST00000539934 TNCP24821 2201 aa9.6□□□□□ -0.87
DDX55-206ENST00000539934 A0A087WWL8 130 aa9.6□□□□□ -0.87
DDX55-206ENST00000539934 IGHV4-39P01824 125 aa9.6□□□□□ -0.87
DDX55-206ENST00000539934 IGHG2P01859 326 aa9.6□□□□□ -0.87
DDX55-206ENST00000539934 ZFP2Q6ZN57 461 aa9.6□□□□□ -0.87
DDX55-206ENST00000539934 SERP2Q8N6R1 65 aa9.6□□□□□ -0.87
DDX55-206ENST00000539934 COPS9Q8WXC6 57 aa9.6□□□□□ -0.87
DDX55-206ENST00000539934 DAZ1Q9NQZ3 744 aaKnown RBP9.6□□□□□ -0.87
DDX55-206ENST00000539934 IGHV4-30-2A0A087WSY4 118 aa9.6□□□□□ -0.87
DDX55-206ENST00000539934 IGLV1-47P01700 117 aa9.6□□□□□ -0.87
DDX55-206ENST00000539934 LY6G5BQ8NDX9 201 aa9.6□□□□□ -0.87
DDX55-206ENST00000539934 H3BMM0 161 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms