RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CST9LP1Q5W188 147 aa8.54□□□□□ -1.04
PRKDC-207ENST00000536483 NAGKQ9UJ70 344 aa8.54□□□□□ -1.04
PRKDC-207ENST00000536483 FABP5P3A8MUU1 101 aa8.53□□□□□ -1.04
PRKDC-207ENST00000536483 C9JCJ5 164 aa8.53□□□□□ -1.04
PRKDC-207ENST00000536483 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
PRKDC-207ENST00000536483 ORM1P02763 201 aa8.53□□□□□ -1.04
PRKDC-207ENST00000536483 RNASE3P12724 160 aaKnown RBP8.53□□□□□ -1.04
PRKDC-207ENST00000536483 S100PP25815 95 aa8.53□□□□□ -1.04
PRKDC-207ENST00000536483 UBE2G2P60604 165 aa8.53□□□□□ -1.04
PRKDC-207ENST00000536483 RPL23P62829 140 aaKnown RBP8.53□□□□□ -1.04
PRKDC-207ENST00000536483 FMC1Q96HJ9 113 aa8.53□□□□□ -1.04
PRKDC-207ENST00000536483 TRAV34A0A0B4J273 112 aa8.52□□□□□ -1.05
PRKDC-207ENST00000536483 IGKV3D-20A0A0C4DH25 116 aa8.52□□□□□ -1.05
PRKDC-207ENST00000536483 CRIP1P50238 77 aa8.52□□□□□ -1.05
PRKDC-207ENST00000536483 ELOBQ15370 118 aa8.52□□□□□ -1.05
PRKDC-207ENST00000536483 Q86TA4 180 aa8.52□□□□□ -1.05
PRKDC-207ENST00000536483 OR4C5Q8NGB2 326 aa8.52□□□□□ -1.05
PRKDC-207ENST00000536483 FAT1Q14517 4588 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 TRAV9-1A0A075B6T8 112 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 TRGV4A0A0C4DH28 118 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 K7EQD1 137 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 RS1O15537 224 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 LTAP01374 205 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 S100A9P06702 114 aaKnown RBP8.51□□□□□ -1.05
PRKDC-207ENST00000536483 GATA1P15976 413 aaPredicted RBP8.51□□□□□ -1.05
PRKDC-207ENST00000536483 AKR1C3P42330 323 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 TIRAPP58753 221 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 ADIRFQ15847 76 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 ZNF674Q2M3X9 581 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 ZNF876PQ49A33 203 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 NEGR1Q7Z3B1 354 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 SH2D6Q7Z4S9 175 aa8.51□□□□□ -1.05
PRKDC-207ENST00000536483 K7EP13 123 aa8.5□□□□□ -1.05
PRKDC-207ENST00000536483 CFAP126Q5VTH2 177 aa8.5□□□□□ -1.05
PRKDC-207ENST00000536483 KCNIP4Q6PIL6 250 aa8.5□□□□□ -1.05
PRKDC-207ENST00000536483 LINC01551Q86U37 167 aa8.5□□□□□ -1.05
PRKDC-207ENST00000536483 ISOC2Q96AB3 205 aa8.5□□□□□ -1.05
PRKDC-207ENST00000536483 IL36BQ9NZH7 164 aa8.5□□□□□ -1.05
PRKDC-207ENST00000536483 TRBV6-4A0A1B0GX49 114 aa8.49□□□□□ -1.05
PRKDC-207ENST00000536483 PGPEP1LA6NFU8 196 aa8.49□□□□□ -1.05
PRKDC-207ENST00000536483 S100A6P06703 90 aa8.49□□□□□ -1.05
PRKDC-207ENST00000536483 RPL19P84098 196 aaKnown RBP8.49□□□□□ -1.05
PRKDC-207ENST00000536483 ZFP2Q6ZN57 461 aa8.49□□□□□ -1.05
PRKDC-207ENST00000536483 SMIM12Q96EX1 92 aa8.49□□□□□ -1.05
PRKDC-207ENST00000536483 ZC2HC1AQ96GY0 325 aa8.49□□□□□ -1.05
PRKDC-207ENST00000536483 MLST8Q9BVC4 326 aa8.49□□□□□ -1.05
PRKDC-207ENST00000536483 SIVA1O15304 175 aa8.48□□□□□ -1.05
PRKDC-207ENST00000536483 GYPEP15421 78 aa8.48□□□□□ -1.05
PRKDC-207ENST00000536483 SRIP30626 198 aa8.48□□□□□ -1.05
PRKDC-207ENST00000536483 RPS10P46783 165 aaKnown RBP8.48□□□□□ -1.05
PRKDC-207ENST00000536483 UBE2G1P62253 170 aa8.48□□□□□ -1.05
PRKDC-207ENST00000536483 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
PRKDC-207ENST00000536483 FAM162BQ5T6X4 162 aa8.48□□□□□ -1.05
PRKDC-207ENST00000536483 A8MWV9 139 aa8.47□□□□□ -1.05
PRKDC-207ENST00000536483 SH2D1AO60880 128 aa8.47□□□□□ -1.05
PRKDC-207ENST00000536483 NXPH4O95158 308 aa8.47□□□□□ -1.05
PRKDC-207ENST00000536483 ASIPP42127 132 aa8.47□□□□□ -1.05
PRKDC-207ENST00000536483 LINC00315P59091 139 aa8.47□□□□□ -1.05
PRKDC-207ENST00000536483 UFSP1Q6NVU6 142 aa8.47□□□□□ -1.05
PRKDC-207ENST00000536483 SLC25A29Q8N8R3 303 aa8.47□□□□□ -1.05
PRKDC-207ENST00000536483 SCO2A0A1W2PP80 73 aa8.46□□□□□ -1.06
PRKDC-207ENST00000536483 C5orf52A6NGY3 159 aa8.46□□□□□ -1.06
PRKDC-207ENST00000536483 CXCL1P09341 107 aa8.46□□□□□ -1.06
PRKDC-207ENST00000536483 MGST1P10620 155 aaKnown RBP8.46□□□□□ -1.06
PRKDC-207ENST00000536483 FUSP35637 526 aaKnown RBP eCLIP8.46□□□□□ -1.06
PRKDC-207ENST00000536483 COX19Q49B96 90 aa8.46□□□□□ -1.06
PRKDC-207ENST00000536483 Q6ZRN7 208 aaPredicted RBP8.46□□□□□ -1.06
PRKDC-207ENST00000536483 OR10G8Q8NGN5 311 aa8.46□□□□□ -1.06
PRKDC-207ENST00000536483 SFRP2Q96HF1 295 aa8.46□□□□□ -1.06
PRKDC-207ENST00000536483 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
PRKDC-207ENST00000536483 S100A8P05109 93 aa8.45□□□□□ -1.06
PRKDC-207ENST00000536483 DNAH10OSP0CZ25 163 aa8.45□□□□□ -1.06
PRKDC-207ENST00000536483 S100A4P26447 101 aaKnown RBP8.45□□□□□ -1.06
PRKDC-207ENST00000536483 RPL35P42766 123 aaKnown RBP8.45□□□□□ -1.06
PRKDC-207ENST00000536483 GNG4P50150 75 aa8.45□□□□□ -1.06
PRKDC-207ENST00000536483 RHOHQ15669 191 aa8.45□□□□□ -1.06
PRKDC-207ENST00000536483 OCC1Q8TAD7 63 aa8.45□□□□□ -1.06
PRKDC-207ENST00000536483 OSTCQ9NRP0 149 aa8.45□□□□□ -1.06
PRKDC-207ENST00000536483 ARMS2P0C7Q2 107 aa8.44□□□□□ -1.06
PRKDC-207ENST00000536483 PRADC1Q9BSG0 188 aa8.44□□□□□ -1.06
PRKDC-207ENST00000536483 URGCP-MRPS24S4R325 110 aa8.44□□□□□ -1.06
PRKDC-207ENST00000536483 TRAV9-2A0A087WT02 112 aa8.43□□□□□ -1.06
PRKDC-207ENST00000536483 TGIF2-C20orf24A0A0A6YYL0 155 aa8.43□□□□□ -1.06
PRKDC-207ENST00000536483 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
PRKDC-207ENST00000536483 LINC00694P0DN24 101 aa8.43□□□□□ -1.06
PRKDC-207ENST00000536483 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
PRKDC-207ENST00000536483 FAM231DQ6ZW35 169 aa8.43□□□□□ -1.06
PRKDC-207ENST00000536483 BAGE2Q86Y30 109 aa8.43□□□□□ -1.06
PRKDC-207ENST00000536483 SSBP4Q9BWG4 385 aaPredicted RBP8.43□□□□□ -1.06
PRKDC-207ENST00000536483 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
PRKDC-207ENST00000536483 TNFRSF18Q9Y5U5 241 aa8.43□□□□□ -1.06
PRKDC-207ENST00000536483 TRBV20OR9-2A0A075B6H5 130 aa8.42□□□□□ -1.06
PRKDC-207ENST00000536483 H3BVH4 76 aa8.42□□□□□ -1.06
PRKDC-207ENST00000536483 RHODO00212 210 aa8.42□□□□□ -1.06
PRKDC-207ENST00000536483 Q6ZSN1 163 aa8.42□□□□□ -1.06
PRKDC-207ENST00000536483 SYT8Q8NBV8 401 aa8.42□□□□□ -1.06
PRKDC-207ENST00000536483 DERL1Q9BUN8 251 aa8.42□□□□□ -1.06
PRKDC-207ENST00000536483 EREGO14944 169 aa8.41□□□□□ -1.06
PRKDC-207ENST00000536483 CRYGDP07320 174 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms