RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 OPRPNQ99935 248 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-219ENST00000528621 YLPM1P49750 1951 aaKnown RBP6.5□□□□□ -1.37
CTNND1-219ENST00000528621 DNAJC9-AS1A6NH13 148 aa6.5□□□□□ -1.37
CTNND1-219ENST00000528621 MDFICQ9P1T7 246 aa6.5□□□□□ -1.37
CTNND1-219ENST00000528621 A0A0J9YX75 114 aa6.5□□□□□ -1.37
CTNND1-219ENST00000528621 TMEM258P61165 79 aa6.5□□□□□ -1.37
CTNND1-219ENST00000528621 A0A0J9YXV3 536 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 LINC00173Q6ZV60 143 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 TPRP12270 2363 aaKnown RBP6.49□□□□□ -1.37
CTNND1-219ENST00000528621 C2orf16Q68DN1 1984 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 NUP210LQ5VU65 1888 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 JMJD7-PLA2G4BH0Y9G9 81 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 CCL25O15444 150 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 RPL39P62891 51 aaKnown RBP6.49□□□□□ -1.37
CTNND1-219ENST00000528621 VSIG2Q96IQ7 327 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 MAP6D1Q9H9H5 199 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 UBE2AP49459 152 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 CACNA1DQ01668 2161 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 PHF3Q92576 2039 aaKnown RBP6.49□□□□□ -1.37
CTNND1-219ENST00000528621 E7EUB6 86 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 SMIM20Q8N5G0 67 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 Q8NA96 180 aa6.49□□□□□ -1.37
CTNND1-219ENST00000528621 IGHV1-58A0A0C4DH39 117 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 CHKB-CPT1BH3BT56 60 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 SVILO95425 2214 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 SMIM9A6NGZ8 99 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 TRBV12-3P01733 135 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 Q6YL49 198 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 MED12Q93074 2177 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 C14orf177Q52M58 125 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 NDUFB1O75438 58 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 IGF1P05019 195 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 DEFB135Q30KP9 77 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 FANCD2OSQ96PS1 177 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 ESM1Q9NQ30 184 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 NUPR1O60356 82 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 SMAD5-AS1Q9Y6J3 95 aa6.48□□□□□ -1.37
CTNND1-219ENST00000528621 SDK2Q58EX2 2172 aa6.47□□□□□ -1.37
CTNND1-219ENST00000528621 IGKV1D-37A0A075B6S9 117 aa6.47□□□□□ -1.37
CTNND1-219ENST00000528621 A4D1N5 150 aa6.47□□□□□ -1.37
CTNND1-219ENST00000528621 PDE6GP18545 87 aa6.47□□□□□ -1.37
CTNND1-219ENST00000528621 UNQ9165/PRO28630Q6UXU0 137 aa6.47□□□□□ -1.37
CTNND1-219ENST00000528621 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
CTNND1-219ENST00000528621 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
CTNND1-219ENST00000528621 TRBV10-2A0A0K0K1G8 114 aa6.46□□□□□ -1.37
CTNND1-219ENST00000528621 EIF4EBP1Q13541 118 aaPredicted RBP6.46□□□□□ -1.37
CTNND1-219ENST00000528621 HEATR5AQ86XA9 2040 aa6.46□□□□□ -1.37
CTNND1-219ENST00000528621 MSMPQ1L6U9 139 aa6.46□□□□□ -1.37
CTNND1-219ENST00000528621 LINC01620Q4KN68 170 aa6.46□□□□□ -1.37
CTNND1-219ENST00000528621 NFE4Q86UQ8 179 aa6.46□□□□□ -1.37
CTNND1-219ENST00000528621 TMEM61Q8N0U2 210 aa6.46□□□□□ -1.37
CTNND1-219ENST00000528621 DIRC1Q969H9 104 aa6.46□□□□□ -1.37
CTNND1-219ENST00000528621 PRO0255Q9UI72 69 aa6.46□□□□□ -1.37
CTNND1-219ENST00000528621 RTTNQ86VV8 2226 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 LYRM9A8MSI8 78 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 ATOX1O00244 68 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 IGHV4-31P0DP07 118 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 C20orf203Q8NBC4 194 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 CRYGBP07316 175 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 RNF183Q96D59 192 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 AHCTF1Q8WYP5 2266 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 IGHV4-28A0A0C4DH34 117 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 A0A1B0GXF2 115 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 H3BT86 120 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 TMEM256-PLSCR3K7ERE1 68 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 SPATA12Q7Z6I5 190 aa6.46□□□□□ -1.38
CTNND1-219ENST00000528621 DEFB4AO15263 64 aa6.45□□□□□ -1.38
CTNND1-219ENST00000528621 SPAG11BQ08648 103 aa6.45□□□□□ -1.38
CTNND1-219ENST00000528621 ODF1Q14990 250 aa6.45□□□□□ -1.38
CTNND1-219ENST00000528621 DAND5Q8N907 189 aa6.45□□□□□ -1.38
CTNND1-219ENST00000528621 CEP290O15078 2479 aa6.45□□□□□ -1.38
CTNND1-219ENST00000528621 SNRNP200O75643 2136 aaKnown RBP6.45□□□□□ -1.38
CTNND1-219ENST00000528621 TNRC6AQ8NDV7 1962 aaKnown RBP6.45□□□□□ -1.38
CTNND1-219ENST00000528621 TEN1Q86WV5 123 aa6.45□□□□□ -1.38
CTNND1-219ENST00000528621 RS1O15537 224 aa6.45□□□□□ -1.38
CTNND1-219ENST00000528621 NOTCH4Q99466 2003 aa6.45□□□□□ -1.38
CTNND1-219ENST00000528621 LMO4P61968 165 aa6.44□□□□□ -1.38
CTNND1-219ENST00000528621 EBI3Q14213 229 aa6.44□□□□□ -1.38
CTNND1-219ENST00000528621 MP68P56378 58 aa6.44□□□□□ -1.38
CTNND1-219ENST00000528621 LY6LH3BQJ8 138 aa6.44□□□□□ -1.38
CTNND1-219ENST00000528621 DEFB1P60022 68 aa6.44□□□□□ -1.38
CTNND1-219ENST00000528621 NREPQ16612 68 aa6.44□□□□□ -1.38
CTNND1-219ENST00000528621 MIAQ16674 131 aa6.44□□□□□ -1.38
CTNND1-219ENST00000528621 B9D2Q9BPU9 175 aa6.44□□□□□ -1.38
CTNND1-219ENST00000528621 C19orf84I3L1E1 186 aa6.43□□□□□ -1.38
CTNND1-219ENST00000528621 TP53TG3Q9ULZ0 132 aa6.43□□□□□ -1.38
CTNND1-219ENST00000528621 IGLC6P0CF74 106 aa6.43□□□□□ -1.38
CTNND1-219ENST00000528621 FXYD2P54710 66 aa6.43□□□□□ -1.38
CTNND1-219ENST00000528621 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
CTNND1-219ENST00000528621 SEC61GP60059 68 aa6.43□□□□□ -1.38
CTNND1-219ENST00000528621 RBM3P98179 157 aaKnown RBP6.43□□□□□ -1.38
CTNND1-219ENST00000528621 MUC22E2RYF6 1773 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-219ENST00000528621 PSMB8P28062 276 aa6.43□□□□□ -1.38
CTNND1-219ENST00000528621 HEATR1Q9H583 2144 aaKnown RBP6.42□□□□□ -1.38
CTNND1-219ENST00000528621 WISP2O76076 250 aa6.42□□□□□ -1.38
CTNND1-219ENST00000528621 TDRG1Q3Y452 100 aa6.42□□□□□ -1.38
CTNND1-219ENST00000528621 C11orf45Q8TAV5 145 aa6.42□□□□□ -1.38
CTNND1-219ENST00000528621 CLEC2BQ92478 149 aa6.42□□□□□ -1.38
CTNND1-219ENST00000528621 UFSP1Q6NVU6 142 aa6.42□□□□□ -1.38
CTNND1-219ENST00000528621 Q6ZUT4 128 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms