RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RALGAPBQ86X10 1494 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 FANCD2Q9BXW9 1451 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 FAT4Q6V0I7 4981 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 IGLV3-32A0A0A0MS00 114 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 LOC107984156A0A0G2JMH3 177 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 FAM236AA0A1B0GUQ0 79 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 FAM236BA0A1B0GV22 79 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 ZNF670-ZNF695F2Z2N8 137 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 M0R2P5 195 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 GEMIN2O14893 280 aaKnown RBP1.57□□□□□ -2.16
SQLE-204ENST00000520493 CCL25O15444 150 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 SPCS2Q15005 226 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 CLLU1Q5K131 121 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 ARL17AQ8IVW1 177 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 TCTEX1D1Q8N7M0 179 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 ARL11Q969Q4 196 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 LINC00470Q9BZP3 86 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 TMEM191AQ9H0A3 160 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 LSM2Q9Y333 95 aaKnown RBP1.57□□□□□ -2.16
SQLE-204ENST00000520493 MYH6P13533 1939 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 MCM3APO60318 1980 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 TMEM2Q9UHN6 1383 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 PRDM2Q13029 1718 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 KIDINS220Q9ULH0 1771 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 PTPRGP23470 1445 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 MYOM3Q5VTT5 1437 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 ARHGAP35Q9NRY4 1499 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 MRC2Q9UBG0 1479 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 ANK1P16157 1881 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 DNMBPQ6XZF7 1577 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 MYO18AQ92614 2054 aaKnown RBP1.56□□□□□ -2.16
SQLE-204ENST00000520493 CFAP43Q8NDM7 1665 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 IGKV3-7A0A075B6H7 116 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 IGKV2-40A0A087WW87 121 aaPredicted RBP1.56□□□□□ -2.16
SQLE-204ENST00000520493 A0A0J9YY99 117 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 BBIP1A8MTZ0 92 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 CDC42EP2O14613 210 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 IGKV2D-40P01614 121 aaPredicted RBP1.56□□□□□ -2.16
SQLE-204ENST00000520493 IL9P15248 144 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 NEDD8Q15843 81 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 LINC00322Q6ZN03 302 aaPredicted RBP1.56□□□□□ -2.16
SQLE-204ENST00000520493 ATP11AUNQ6ZP68 121 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 DEFB119Q8N690 84 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 C5orf17Q8NAS9 161 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 ATP6V0E2Q8NHE4 81 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 LINC00526Q96FQ7 95 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 TMEM14CQ9P0S9 112 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 DNAH14Q0VDD8 3507 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 CASKIN1Q8WXD9 1431 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 LRRC9Q6ZRR7 1453 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 CHD3Q12873 2000 aaKnown RBP1.56□□□□□ -2.16
SQLE-204ENST00000520493 EFCAB5A4FU69 1503 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 ABCA10Q8WWZ4 1543 aa1.56□□□□□ -2.16
SQLE-204ENST00000520493 TIAM1Q13009 1591 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 LAMC3Q9Y6N6 1575 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 UNC13CQ8NB66 2214 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 KDM5AP29375 1690 aaKnown RBP1.55□□□□□ -2.16
SQLE-204ENST00000520493 CUL7Q14999 1698 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 TRAV2A0A0B4J234 112 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 PRB4P10163 310 aaPredicted RBP1.55□□□□□ -2.16
SQLE-204ENST00000520493 RRAS2P62070 204 aaPredicted RBP1.55□□□□□ -2.16
SQLE-204ENST00000520493 EMX2Q04743 252 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 GDF5OSQ5U4N7 250 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 SCIMPQ6UWF3 145 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 CCDC167Q9P0B6 97 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 TGP01266 2768 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 SSPOA2VEC9 5147 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 POLA1P09884 1462 aaPredicted RBP1.55□□□□□ -2.16
SQLE-204ENST00000520493 FYCO1Q9BQS8 1478 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 FRYLO94915 3013 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 ADGRB1O14514 1584 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 MGAM2Q2M2H8 2515 aa1.55□□□□□ -2.16
SQLE-204ENST00000520493 COL12A1Q99715 3063 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 A0A1W2PPB8 328 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 A0A1W2PRS3 328 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 KIR3DP1A8MWS1 328 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 JMJD7-PLA2G4BH0Y9G9 81 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 ADCYAP1P18509 176 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 IDO2Q6ZQW0 420 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 C3orf62Q6ZUJ4 267 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 SDF2Q99470 211 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 MRPL57Q9BQC6 102 aaKnown RBP1.54□□□□□ -2.16
SQLE-204ENST00000520493 TAS2R8Q9NYW2 309 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 PRRC2CQ9Y520 2896 aaKnown RBP1.54□□□□□ -2.16
SQLE-204ENST00000520493 DIP2BQ9P265 1576 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 TRPM7Q96QT4 1865 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 PTPRDP23468 1912 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 NINQ8N4C6 2090 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 SDK1Q7Z5N4 2213 aa1.54□□□□□ -2.16
SQLE-204ENST00000520493 TRBV6-7A0A0A0MS04 114 aa1.53□□□□□ -2.16
SQLE-204ENST00000520493 FAM92AA1XBS5 289 aa1.53□□□□□ -2.16
SQLE-204ENST00000520493 HFM1A2PYH4 1435 aa1.53□□□□□ -2.16
SQLE-204ENST00000520493 ZNF25P17030 456 aaPredicted RBP1.53□□□□□ -2.16
SQLE-204ENST00000520493 GUCA1AP43080 201 aaPredicted RBP1.53□□□□□ -2.16
SQLE-204ENST00000520493 EML5Q05BV3 1969 aa1.53□□□□□ -2.16
SQLE-204ENST00000520493 URB2Q14146 1524 aaKnown RBP1.53□□□□□ -2.16
SQLE-204ENST00000520493 CCDC18Q5T9S5 1454 aa1.53□□□□□ -2.16
SQLE-204ENST00000520493 MADDQ8WXG6 1647 aa1.53□□□□□ -2.16
SQLE-204ENST00000520493 CTTNBP2Q8WZ74 1663 aa1.53□□□□□ -2.16
SQLE-204ENST00000520493 UACAQ9BZF9 1416 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms