RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CXCL8P10145 99 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 SLC25A4P12235 298 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 TPT1P13693 172 aaKnown RBP1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 SNCAP37840 140 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 PEA15Q15121 130 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 ASB16-AS1Q495Z4 193 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 C9orf153Q5TBE3 101 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 GDF5OSQ5U4N7 250 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 Q6ZUT4 128 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 ARPINQ7Z6K5 226 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 FAM216BQ8N7L0 139 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 ATP6V0E2Q8NHE4 81 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 LINC00052Q96N35 136 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 RABAC1Q9UI14 185 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 TPRKBQ9Y3C4 175 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 LTN1O94822 1766 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 DLG5Q8TDM6 1919 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 ADGRB1O14514 1584 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 KNDC1Q76NI1 1749 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 TANC1Q9C0D5 1861 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 ARHGAP5Q13017 1502 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 DLC1Q96QB1 1528 aa1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 RP1L1Q8IWN7 2480 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P46-201ENST00000520062 HEATR1Q9H583 2144 aaKnown RBP1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 MUC6Q6W4X9 2439 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 PIGBOS1A0A0B4J2F0 54 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 hDV103S1A0JD37 113 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 MCRIP1C9JLW8 97 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 F8W1H4 67 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 SSSCA1O60232 199 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 NUPR1O60356 82 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 GYPAP02724 150 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 GYPBP06028 91 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 ASIPP42127 132 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 Q0VG73 95 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 C12orf73Q69YU5 71 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 ZNF720Q7Z2F6 126 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 OR5AS1Q8N127 324 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 FAM19A2Q8N3H0 131 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 OTOSQ8NHW6 89 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 SMCO4Q9NRQ5 59 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 INO80Q9ULG1 1556 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 DNAJC15Q9Y5T4 150 aa1.7□□□□□ -2.14
HMGB1P46-201ENST00000520062 COL24A1Q17RW2 1714 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 PEAK1Q9H792 1746 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 FRMPD1Q5SYB0 1578 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 PDCD5O14737 125 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 PITX3O75364 302 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 APOC3P02656 99 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 SAA1P0DJI8 122 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 CCL4P13236 92 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 SNRPD3P62318 126 aaKnown RBP1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 ATP11AUNQ6ZP68 121 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 ODF3Q96PU9 254 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 TMEM131LA2VDJ0 1609 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 TRPM7Q96QT4 1865 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 PLXNA1Q9UIW2 1896 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 COL1A1P02452 1464 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 ERVK-7P63135 1459 aa1.69□□□□□ -2.14
HMGB1P46-201ENST00000520062 EML5Q05BV3 1969 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 ADAMTS12P58397 1594 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 PATJQ8NI35 1801 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 DOCK2Q92608 1830 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 CASKIN1Q8WXD9 1431 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 RGPD8O14715 1765 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 RGPD5Q99666 1765 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 ABCA10Q8WWZ4 1543 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 LOC107986453A0A1B0GWG9 222 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 SNCGO76070 127 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 POLR2JP52435 117 aaKnown RBP1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 ATP5EP56381 51 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 NPC2P61916 151 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 ZGRF1Q86YA3 2104 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 Q8TAT8 98 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 C10orf82Q8WW14 230 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 ZC2HC1AQ96GY0 325 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 OBSCN-AS1Q96MR7 158 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 NPVFQ9HCQ7 196 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 UQCR10Q9UDW1 63 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 LINC00312Q9Y6C7 94 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 MYO7AQ13402 2215 aa1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 TNRC6BQ9UPQ9 1833 aaKnown RBP1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 INTS1Q8N201 2190 aaKnown RBP1.68□□□□□ -2.14
HMGB1P46-201ENST00000520062 FREM3P0C091 2139 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 LAMB4A4D0S4 1761 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 PTPN23Q9H3S7 1636 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 MARF1Q9Y4F3 1742 aaKnown RBP1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 OOSP1A8MZH6 123 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 NDUFB6O95139 128 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 COX7CP15954 63 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 CKS2P33552 79 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 PCBD1P61457 104 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 BLCAPP62952 87 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 CIRBPQ14011 172 aaKnown RBP1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 HMGN3Q15651 99 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 OR10AG1Q8NH19 301 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 TSKUQ8WUA8 353 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 TMEM242Q9NWH2 141 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 LSM2Q9Y333 95 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms