RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 ZNF843Q8N446 348 aa9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 MRPL53Q96EL3 112 aaKnown RBP9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 PTPRSQ13332 1948 aa9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 ZNRD1Q9P1U0 126 aa9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 LENEPQ9Y5L5 61 aa9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 V9GYY9 64 aa9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 EGR2P11161 476 aaPredicted RBP9.55□□□□□ -0.88
PCDHGA6-201ENST00000517434 SEM1Q6ZVN7 128 aa9.55□□□□□ -0.88
PCDHGA6-201ENST00000517434 CLUHP3Q96NS8 147 aa9.55□□□□□ -0.88
PCDHGA6-201ENST00000517434 E9PLD3 99 aa9.55□□□□□ -0.88
PCDHGA6-201ENST00000517434 GTSF1Q8WW33 167 aa9.55□□□□□ -0.88
PCDHGA6-201ENST00000517434 IGFBPL1Q8WX77 278 aa9.55□□□□□ -0.88
PCDHGA6-201ENST00000517434 IGF2BP2-AS1Q96M15 143 aa9.55□□□□□ -0.88
PCDHGA6-201ENST00000517434 ZNF561-AS1K7EIQ3 104 aa9.55□□□□□ -0.88
PCDHGA6-201ENST00000517434 MRPL55Q7Z7F7 128 aaKnown RBP9.55□□□□□ -0.88
PCDHGA6-201ENST00000517434 PIFOQ8TCI5 191 aa9.55□□□□□ -0.88
PCDHGA6-201ENST00000517434 IGHV4-38-2P0DP08 117 aa9.54□□□□□ -0.88
PCDHGA6-201ENST00000517434 ZFP2Q6ZN57 461 aa9.54□□□□□ -0.88
PCDHGA6-201ENST00000517434 C11orf53Q8IXP5 236 aa9.54□□□□□ -0.88
PCDHGA6-201ENST00000517434 SPATA25Q9BR10 227 aa9.54□□□□□ -0.88
PCDHGA6-201ENST00000517434 CFHR4Q92496 578 aa9.54□□□□□ -0.88
PCDHGA6-201ENST00000517434 GATA1P15976 413 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA6-201ENST00000517434 TNRC6AQ8NDV7 1962 aaKnown RBP9.53□□□□□ -0.88
PCDHGA6-201ENST00000517434 KLK5Q9Y337 293 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA6-201ENST00000517434 YLPM1P49750 1951 aaKnown RBP9.53□□□□□ -0.88
PCDHGA6-201ENST00000517434 NXPH4O95158 308 aa9.53□□□□□ -0.88
PCDHGA6-201ENST00000517434 ODF1Q14990 250 aa9.53□□□□□ -0.88
PCDHGA6-201ENST00000517434 KRTAP27-1Q3LI81 207 aa9.53□□□□□ -0.88
PCDHGA6-201ENST00000517434 Q9H8V8 135 aa9.53□□□□□ -0.88
PCDHGA6-201ENST00000517434 FSTL3O95633 263 aa9.52□□□□□ -0.89
PCDHGA6-201ENST00000517434 SPART-AS1P0CW21 52 aa9.52□□□□□ -0.89
PCDHGA6-201ENST00000517434 CTRLP40313 264 aa9.52□□□□□ -0.89
PCDHGA6-201ENST00000517434 Q6ZSR3 168 aa9.52□□□□□ -0.89
PCDHGA6-201ENST00000517434 Q8N1Y9 231 aa9.52□□□□□ -0.89
PCDHGA6-201ENST00000517434 PTPN13Q12923 2485 aa9.52□□□□□ -0.89
PCDHGA6-201ENST00000517434 TNFRSF13BO14836 293 aaPredicted RBP9.51□□□□□ -0.89
PCDHGA6-201ENST00000517434 DNAH14Q0VDD8 3507 aa9.51□□□□□ -0.89
PCDHGA6-201ENST00000517434 FRMD6-AS1P0C7T7 363 aa9.51□□□□□ -0.89
PCDHGA6-201ENST00000517434 CRYGCP07315 174 aa9.51□□□□□ -0.89
PCDHGA6-201ENST00000517434 ZNF134P52741 427 aa9.51□□□□□ -0.89
PCDHGA6-201ENST00000517434 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
PCDHGA6-201ENST00000517434 C3orf22Q8N5N4 141 aa9.51□□□□□ -0.89
PCDHGA6-201ENST00000517434 SMAD5-AS1Q9Y6J3 95 aa9.51□□□□□ -0.89
PCDHGA6-201ENST00000517434 CCL18P55774 89 aa9.51□□□□□ -0.89
PCDHGA6-201ENST00000517434 ZNF491Q8N8L2 437 aa9.51□□□□□ -0.89
PCDHGA6-201ENST00000517434 K7EMT4 169 aa9.5□□□□□ -0.89
PCDHGA6-201ENST00000517434 SVIPQ8NHG7 77 aa9.5□□□□□ -0.89
PCDHGA6-201ENST00000517434 LGALS9O00182 355 aa9.5□□□□□ -0.89
PCDHGA6-201ENST00000517434 JMJD7-PLA2G4BH0Y9G9 81 aa9.5□□□□□ -0.89
PCDHGA6-201ENST00000517434 NDUFA11Q86Y39 141 aa9.5□□□□□ -0.89
PCDHGA6-201ENST00000517434 TCL1BO95988 128 aa9.5□□□□□ -0.89
PCDHGA6-201ENST00000517434 TM2D2Q9BX73 214 aa9.5□□□□□ -0.89
PCDHGA6-201ENST00000517434 DENND4AQ7Z401 1863 aa9.49□□□□□ -0.89
PCDHGA6-201ENST00000517434 DYNAPQ8N1N2 210 aa9.49□□□□□ -0.89
PCDHGA6-201ENST00000517434 YPEL4Q96NS1 127 aa9.49□□□□□ -0.89
PCDHGA6-201ENST00000517434 IGHV7-81A0A0B4J1V7 117 aa9.49□□□□□ -0.89
PCDHGA6-201ENST00000517434 ZNRF2Q8NHG8 242 aa9.49□□□□□ -0.89
PCDHGA6-201ENST00000517434 NRGNQ92686 78 aa9.49□□□□□ -0.89
PCDHGA6-201ENST00000517434 LYPD6Q86Y78 171 aa9.49□□□□□ -0.89
PCDHGA6-201ENST00000517434 PRUNE2Q8WUY3 3088 aa9.49□□□□□ -0.89
PCDHGA6-201ENST00000517434 SONP18583 2426 aaKnown RBP9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 RBAKDNA6NC62 111 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 TPSG1Q9NRR2 321 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 C5orf56Q8N8D9 126 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 SLC25A29Q8N8R3 303 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 AGPAT4-IT1Q9H0P7 198 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 A0A0J9YXV3 536 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 CGB3P0DN86 165 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 WFDC9Q8NEX5 89 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 C17orf77Q96MU5 243 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 FAM236DA0A1B0GTK5 79 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 FAM236CP0DP71 79 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 SIRPDQ9H106 197 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 NCOR2Q9Y618 2525 aa9.48□□□□□ -0.89
PCDHGA6-201ENST00000517434 C4orf3Q8WVX3 66 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 KLK9Q9UKQ9 250 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 IGHV3-38A0A0C4DH36 116 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 C16orf74Q96GX8 76 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 PCDH15Q96QU1 1955 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 FAM240AA0A1B0GVK7 77 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 IGLC6P0CF74 106 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 GPHB5Q86YW7 130 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 MUC22E2RYF6 1773 aaPredicted RBP9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 CSPG4Q6UVK1 2322 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 XIRP2A4UGR9 3374 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 SZT2Q5T011 3432 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 IGHV3-16A0A0C4DH30 117 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 DIAPH2-AS1Q14236 149 aa9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 RNASE13Q5GAN3 156 aaKnown RBP9.47□□□□□ -0.89
PCDHGA6-201ENST00000517434 MP68P56378 58 aa9.46□□□□□ -0.89
PCDHGA6-201ENST00000517434 BLCAPP62952 87 aa9.46□□□□□ -0.89
PCDHGA6-201ENST00000517434 Q8N9W7 124 aa9.46□□□□□ -0.89
PCDHGA6-201ENST00000517434 MSRB1Q9NZV6 116 aa9.46□□□□□ -0.89
PCDHGA6-201ENST00000517434 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.89
PCDHGA6-201ENST00000517434 SND1-IT1Q9HBX3 110 aa9.46□□□□□ -0.89
PCDHGA6-201ENST00000517434 NDUFA7O95182 113 aa9.46□□□□□ -0.9
PCDHGA6-201ENST00000517434 CLEC2BQ92478 149 aa9.46□□□□□ -0.9
PCDHGA6-201ENST00000517434 C20orf197Q8N268 126 aa9.46□□□□□ -0.9
PCDHGA6-201ENST00000517434 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 C11orf86A6NJI1 115 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms