RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 ARAP1Q96P48 1450 aa-1.61□□□□□ -2.67
RNU6-1088P-201ENST00000516850 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.61□□□□□ -2.67
RNU6-1088P-201ENST00000516850 TRGV1A0A0A0MS02 117 aa-1.61□□□□□ -2.67
RNU6-1088P-201ENST00000516850 TRAV2A0A0B4J234 112 aa-1.61□□□□□ -2.67
RNU6-1088P-201ENST00000516850 TRBV7-6A0A0J9YX20 115 aa-1.61□□□□□ -2.67
RNU6-1088P-201ENST00000516850 PIN1P1O15428 100 aa-1.61□□□□□ -2.67
RNU6-1088P-201ENST00000516850 STX19Q8N4C7 294 aa-1.61□□□□□ -2.67
RNU6-1088P-201ENST00000516850 USF3Q68DE3 2245 aa-1.61□□□□□ -2.67
RNU6-1088P-201ENST00000516850 YTHDC2Q9H6S0 1430 aaKnown RBP-1.61□□□□□ -2.67
RNU6-1088P-201ENST00000516850 CASZ1Q86V15 1759 aa-1.62□□□□□ -2.67
RNU6-1088P-201ENST00000516850 CCDC171Q6TFL3 1326 aa-1.62□□□□□ -2.67
RNU6-1088P-201ENST00000516850 HSD11B1P28845 292 aa-1.62□□□□□ -2.67
RNU6-1088P-201ENST00000516850 PLGLB1Q02325 96 aa-1.62□□□□□ -2.67
RNU6-1088P-201ENST00000516850 C3orf33Q6P1S2 294 aa-1.62□□□□□ -2.67
RNU6-1088P-201ENST00000516850 SLC25A26Q70HW3 274 aa-1.62□□□□□ -2.67
RNU6-1088P-201ENST00000516850 CNOT1A5YKK6 2376 aaKnown RBP-1.63□□□□□ -2.67
RNU6-1088P-201ENST00000516850 CRYBA4P53673 196 aa-1.63□□□□□ -2.67
RNU6-1088P-201ENST00000516850 MRPS15P82914 257 aaKnown RBP-1.63□□□□□ -2.67
RNU6-1088P-201ENST00000516850 C20orf197Q8N268 126 aa-1.63□□□□□ -2.67
RNU6-1088P-201ENST00000516850 SMIM20Q8N5G0 67 aa-1.63□□□□□ -2.67
RNU6-1088P-201ENST00000516850 NDUFAF1Q9Y375 327 aa-1.63□□□□□ -2.67
RNU6-1088P-201ENST00000516850 SIPA1L3O60292 1781 aaPredicted RBP-1.63□□□□□ -2.67
RNU6-1088P-201ENST00000516850 SPTA1P02549 2419 aa-1.64□□□□□ -2.67
RNU6-1088P-201ENST00000516850 PCLOQ9Y6V0 5065 aa-1.64□□□□□ -2.67
RNU6-1088P-201ENST00000516850 PKHD1P08F94 4074 aa-1.64□□□□□ -2.67
RNU6-1088P-201ENST00000516850 G3V318 75 aa-1.64□□□□□ -2.67
RNU6-1088P-201ENST00000516850 IFI27L1Q96BM0 104 aa-1.64□□□□□ -2.67
RNU6-1088P-201ENST00000516850 CBLN4Q9NTU7 201 aa-1.64□□□□□ -2.67
RNU6-1088P-201ENST00000516850 ERG28Q9UKR5 140 aa-1.64□□□□□ -2.67
RNU6-1088P-201ENST00000516850 PLXNB2O15031 1838 aa-1.64□□□□□ -2.67
RNU6-1088P-201ENST00000516850 A2MP01023 1474 aa-1.64□□□□□ -2.67
RNU6-1088P-201ENST00000516850 TSC2P49815 1807 aa-1.65□□□□□ -2.67
RNU6-1088P-201ENST00000516850 APOC4-APOC2K7ER74 178 aa-1.65□□□□□ -2.67
RNU6-1088P-201ENST00000516850 M0QZK8 103 aa-1.65□□□□□ -2.67
RNU6-1088P-201ENST00000516850 UQCRQO14949 82 aa-1.65□□□□□ -2.67
RNU6-1088P-201ENST00000516850 SVEP1Q4LDE5 3571 aa-1.65□□□□□ -2.67
RNU6-1088P-201ENST00000516850 LOC107984640A0A0U1RRK4 108 aa-1.66□□□□□ -2.68
RNU6-1088P-201ENST00000516850 A0A1B0GW64 132 aa-1.66□□□□□ -2.68
RNU6-1088P-201ENST00000516850 PFDN1O60925 122 aa-1.66□□□□□ -2.68
RNU6-1088P-201ENST00000516850 SLC25A6P12236 298 aa-1.66□□□□□ -2.68
RNU6-1088P-201ENST00000516850 HIST1H1BP16401 226 aaKnown RBP-1.66□□□□□ -2.68
RNU6-1088P-201ENST00000516850 CCDC32Q9BV29 185 aa-1.66□□□□□ -2.68
RNU6-1088P-201ENST00000516850 METTL1Q9UBP6 276 aaKnown RBP-1.66□□□□□ -2.68
RNU6-1088P-201ENST00000516850 FAM107AO95990 144 aa-1.67□□□□□ -2.68
RNU6-1088P-201ENST00000516850 DCUN1D2Q6PH85 259 aa-1.67□□□□□ -2.68
RNU6-1088P-201ENST00000516850 TMED4Q7Z7H5 227 aa-1.67□□□□□ -2.68
RNU6-1088P-201ENST00000516850 SLC35B3Q9H1N7 401 aa-1.67□□□□□ -2.68
RNU6-1088P-201ENST00000516850 UFC1Q9Y3C8 167 aa-1.67□□□□□ -2.68
RNU6-1088P-201ENST00000516850 C10orf71Q711Q0 1435 aa-1.67□□□□□ -2.68
RNU6-1088P-201ENST00000516850 KDM3BQ7LBC6 1761 aa-1.67□□□□□ -2.68
RNU6-1088P-201ENST00000516850 PRKDCP78527 4128 aaKnown RBP-1.68□□□□□ -2.68
RNU6-1088P-201ENST00000516850 HERC2O95714 4834 aa-1.68□□□□□ -2.68
RNU6-1088P-201ENST00000516850 M0R2P5 195 aa-1.68□□□□□ -2.68
RNU6-1088P-201ENST00000516850 NPFFO15130 113 aa-1.68□□□□□ -2.68
RNU6-1088P-201ENST00000516850 NPC2P61916 151 aa-1.68□□□□□ -2.68
RNU6-1088P-201ENST00000516850 HSD17B12Q53GQ0 312 aa-1.68□□□□□ -2.68
RNU6-1088P-201ENST00000516850 DYNLRB2Q8TF09 96 aa-1.68□□□□□ -2.68
RNU6-1088P-201ENST00000516850 MED31Q9Y3C7 131 aa-1.68□□□□□ -2.68
RNU6-1088P-201ENST00000516850 IFT172Q9UG01 1749 aa-1.69□□□□□ -2.68
RNU6-1088P-201ENST00000516850 FXYD6-FXYD2A0A087WZ82 144 aa-1.69□□□□□ -2.68
RNU6-1088P-201ENST00000516850 TRAV1-2A0A0B4J238 106 aa-1.69□□□□□ -2.68
RNU6-1088P-201ENST00000516850 RPL22P35268 128 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1088P-201ENST00000516850 PSPHP78330 225 aa-1.69□□□□□ -2.68
RNU6-1088P-201ENST00000516850 DCDP81605 110 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1088P-201ENST00000516850 HRCT1Q6UXD1 115 aa-1.69□□□□□ -2.68
RNU6-1088P-201ENST00000516850 KDM5CP41229 1560 aa-1.69□□□□□ -2.68
RNU6-1088P-201ENST00000516850 KIAA0100Q14667 2235 aaKnown RBP-1.7□□□□□ -2.68
RNU6-1088P-201ENST00000516850 SLC25A5P05141 298 aaKnown RBP-1.7□□□□□ -2.68
RNU6-1088P-201ENST00000516850 SPCS2Q15005 226 aa-1.7□□□□□ -2.68
RNU6-1088P-201ENST00000516850 PTPRMP28827 1452 aa-1.7□□□□□ -2.68
RNU6-1088P-201ENST00000516850 SYNMO15061 1565 aa-1.71□□□□□ -2.68
RNU6-1088P-201ENST00000516850 ZNF609O15014 1411 aa-1.71□□□□□ -2.68
RNU6-1088P-201ENST00000516850 SERPINB1P30740 379 aa-1.71□□□□□ -2.68
RNU6-1088P-201ENST00000516850 S100A3P33764 101 aa-1.71□□□□□ -2.68
RNU6-1088P-201ENST00000516850 MT4P47944 62 aa-1.71□□□□□ -2.68
RNU6-1088P-201ENST00000516850 SNX29P2Q8IUI4 249 aa-1.71□□□□□ -2.68
RNU6-1088P-201ENST00000516850 STOML2Q9UJZ1 356 aa-1.71□□□□□ -2.68
RNU6-1088P-201ENST00000516850 CHD8Q9HCK8 2581 aa-1.71□□□□□ -2.68
RNU6-1088P-201ENST00000516850 ATRQ13535 2644 aa-1.71□□□□□ -2.68
RNU6-1088P-201ENST00000516850 ARHGAP31Q2M1Z3 1444 aa-1.72□□□□□ -2.68
RNU6-1088P-201ENST00000516850 GVINP1Q7Z2Y8 2422 aa-1.72□□□□□ -2.68
RNU6-1088P-201ENST00000516850 TRAV12-3A0A0B4J271 114 aa-1.72□□□□□ -2.68
RNU6-1088P-201ENST00000516850 CCDC179H3BU77 68 aa-1.72□□□□□ -2.68
RNU6-1088P-201ENST00000516850 STX12Q86Y82 276 aa-1.72□□□□□ -2.68
RNU6-1088P-201ENST00000516850 TRAPPC2LQ9UL33 140 aa-1.72□□□□□ -2.68
RNU6-1088P-201ENST00000516850 NOP16Q9Y3C1 178 aaKnown RBP-1.72□□□□□ -2.68
RNU6-1088P-201ENST00000516850 TCRAP04437 139 aa-1.73□□□□□ -2.69
RNU6-1088P-201ENST00000516850 SMIM6P0DI80 62 aa-1.73□□□□□ -2.69
RNU6-1088P-201ENST00000516850 EDDM3BP56851 147 aa-1.73□□□□□ -2.69
RNU6-1088P-201ENST00000516850 RBM3P98179 157 aaKnown RBP-1.73□□□□□ -2.69
RNU6-1088P-201ENST00000516850 SCN3BQ9NY72 215 aa-1.73□□□□□ -2.69
RNU6-1088P-201ENST00000516850 UHRF1BP1LA0JNW5 1464 aa-1.74□□□□□ -2.69
RNU6-1088P-201ENST00000516850 BORCS7-ASMTA0A0B4J1R7 106 aa-1.74□□□□□ -2.69
RNU6-1088P-201ENST00000516850 WFDC6Q9BQY6 131 aa-1.74□□□□□ -2.69
RNU6-1088P-201ENST00000516850 NPVFQ9HCQ7 196 aa-1.74□□□□□ -2.69
RNU6-1088P-201ENST00000516850 MED23Q9ULK4 1368 aa-1.74□□□□□ -2.69
RNU6-1088P-201ENST00000516850 E7EQ34 232 aa-1.75□□□□□ -2.69
RNU6-1088P-201ENST00000516850 ATP6V0E2Q8NHE4 81 aa-1.75□□□□□ -2.69
RNU6-1088P-201ENST00000516850 TP53AIP1Q9HCN2 124 aa-1.75□□□□□ -2.69
RNU6-1088P-201ENST00000516850 EIF3AQ14152 1382 aaKnown RBP-1.75□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms