RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 NDUFAF3Q9BU61 184 aa4.12□□□□□ -1.75
RNF4-217ENST00000511892 HSPG2P98160 4391 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 LRP1BQ9NZR2 4599 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 TRAV8-1A0A0A6YYK1 113 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 TEX48A0A1B0GUV7 120 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 A0A1B0GXF2 115 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 HIGD1CA8MV81 97 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 SNURFLB1AK76 121 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 P0DMU3 169 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 FAM231AP0DMU4 169 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 FAM231CP0DMU5 169 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 ESDP10768 282 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 TSPOP30536 169 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 HBBP68871 147 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 Q0VG73 95 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 RIGQ13278 110 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 SMUG1Q53HV7 270 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 OR10J3Q5JRS4 329 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 C9orf47Q6ZRZ4 202 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 LINC00518Q8N0U6 118 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 HIST3H2BBQ8N257 126 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 POM121L12Q8N7R1 296 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 GATD1Q8NB37 220 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 NHLRC2Q8NBF2 726 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 NUP35Q8NFH5 326 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 OR2D3Q8NGH3 330 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 BORCS7Q96B45 105 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 LINC00477Q96M19 166 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 PACRGQ96M98 296 aaPredicted RBP4.11□□□□□ -1.75
RNF4-217ENST00000511892 TMEM208Q9BTX3 173 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 KRTAP17-1Q9BYP8 105 aa4.11□□□□□ -1.75
RNF4-217ENST00000511892 FABP5P3A8MUU1 101 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 APCSP02743 223 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 HTN3P15516 51 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 CRISP2P16562 243 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 CDKN1BP46527 198 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 ZNF138P52744 262 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 TCL1AP56279 114 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 DAD1P61803 113 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 TMEM78Q5T7P6 136 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 TMEM256Q8N2U0 113 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 TMEM18Q96B42 140 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 ZC2HC1AQ96GY0 325 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 SGK494Q96LW2 274 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 LINC01587Q99440 93 aa4.1□□□□□ -1.75
RNF4-217ENST00000511892 IGKV2-40A0A087WW87 121 aaPredicted RBP4.09□□□□□ -1.75
RNF4-217ENST00000511892 A0A1B0GUT8 65 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 A0A1B0GVY2 172 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 LYRM9A8MSI8 78 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 M0R2N4 97 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 RTL8CO15255 209 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 SH2D1AO60880 128 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 IGKV2D-40P01614 121 aaPredicted RBP4.09□□□□□ -1.75
RNF4-217ENST00000511892 DEFB130BP0DP73 79 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 DEFB130AP0DP74 79 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 HTN1P15515 57 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 LINC00310P59036 64 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 RAB4BP61018 213 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 GFI1BQ5VTD9 330 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 MRPL54Q6P161 138 aaKnown RBP4.09□□□□□ -1.75
RNF4-217ENST00000511892 Q6ZR54 194 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 OR10J6PQ8NGY7 276 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 RNASE8Q8TDE3 154 aaKnown RBP4.09□□□□□ -1.75
RNF4-217ENST00000511892 ODF3Q96PU9 254 aa4.09□□□□□ -1.75
RNF4-217ENST00000511892 APOBP04114 4563 aaKnown RBP4.09□□□□□ -1.75
RNF4-217ENST00000511892 F2Z2F3 143 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 RAB4AP20338 218 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 CTRLP40313 264 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 CRIP1P50238 77 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 S100A12P80511 92 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 ERCC8Q13216 396 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 LGALS9BQ3B8N2 356 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 ZNF493Q6ZR52 646 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 ABCA13Q86UQ4 5058 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 BAGE3Q86Y29 109 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 LINC00612Q8N6U2 182 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 TMEM263Q8WUH6 116 aaKnown RBP4.08□□□□□ -1.76
RNF4-217ENST00000511892 GTSF1Q8WW33 167 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 C16orf74Q96GX8 76 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 PGLYRP4Q96LB8 373 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 FAM19A4Q96LR4 140 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 C12orf57Q99622 126 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 HIST1H2BLQ99880 126 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 VGLL1Q99990 258 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 C20orf144Q9BQM9 153 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 CNFNQ9BYD5 112 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 AGPAT4-IT1Q9H0P7 198 aa4.08□□□□□ -1.76
RNF4-217ENST00000511892 NOP10Q9NPE3 64 aaKnown RBP4.08□□□□□ -1.76
RNF4-217ENST00000511892 IGLV2-18A0A075B6J9 118 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 TRAV12-3A0A0B4J271 114 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 TRAV21A0A0B4J279 112 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 CBY3A6NI87 242 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 IFITM10A6NMD0 228 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 F5H768 121 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 J3KRW8 73 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 SPINK4O60575 86 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 IGLC6P0CF74 106 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 MED14OSP0DP75 135 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 FABP4P15090 132 aa4.07□□□□□ -1.76
RNF4-217ENST00000511892 LEPP41159 167 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms