RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 GRNP28799 593 aaKnown RBP11.67□□□□□ -0.54
C4A-259ENST00000498271 ABCA1O95477 2261 aa11.67□□□□□ -0.54
C4A-259ENST00000498271 MED13Q9UHV7 2174 aa11.67□□□□□ -0.54
C4A-259ENST00000498271 ELANEP08246 267 aa11.67□□□□□ -0.54
C4A-259ENST00000498271 DAZAP2Q15038 168 aaPredicted RBP11.67□□□□□ -0.54
C4A-259ENST00000498271 TNRC6AQ8NDV7 1962 aaKnown RBP11.67□□□□□ -0.54
C4A-259ENST00000498271 A0A0J9YXV3 536 aa11.66□□□□□ -0.54
C4A-259ENST00000498271 C5orf47Q569G3 176 aa11.66□□□□□ -0.54
C4A-259ENST00000498271 K7EIM0 57 aa11.66□□□□□ -0.54
C4A-259ENST00000498271 WI2-2373I1.2A0A1W2PRP0 233 aa11.66□□□□□ -0.54
C4A-259ENST00000498271 RNF152Q8N8N0 203 aa11.66□□□□□ -0.54
C4A-259ENST00000498271 NPBQ8NG41 125 aa11.66□□□□□ -0.54
C4A-259ENST00000498271 CRYGCP07315 174 aa11.66□□□□□ -0.54
C4A-259ENST00000498271 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
C4A-259ENST00000498271 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
C4A-259ENST00000498271 IGKV3D-7A0A0C4DH55 119 aa11.66□□□□□ -0.54
C4A-259ENST00000498271 P0C879 139 aa11.65□□□□□ -0.54
C4A-259ENST00000498271 SND1-IT1Q9HBX3 110 aa11.65□□□□□ -0.54
C4A-259ENST00000498271 TCL1BO95988 128 aa11.65□□□□□ -0.55
C4A-259ENST00000498271 MT-ATP8P03928 68 aa11.65□□□□□ -0.55
C4A-259ENST00000498271 IGLV11-55A0A075B6I3 123 aa11.64□□□□□ -0.55
C4A-259ENST00000498271 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
C4A-259ENST00000498271 C9orf66Q5T8R8 295 aa11.64□□□□□ -0.55
C4A-259ENST00000498271 C9orf47Q6ZRZ4 202 aa11.64□□□□□ -0.55
C4A-259ENST00000498271 MED13LQ71F56 2210 aa11.64□□□□□ -0.55
C4A-259ENST00000498271 IGLV2-8P01709 118 aa11.64□□□□□ -0.55
C4A-259ENST00000498271 CRYGBP07316 175 aa11.64□□□□□ -0.55
C4A-259ENST00000498271 MSMPQ1L6U9 139 aa11.64□□□□□ -0.55
C4A-259ENST00000498271 C10orf142B7Z368 130 aa11.64□□□□□ -0.55
C4A-259ENST00000498271 Q8N1Y9 231 aa11.63□□□□□ -0.55
C4A-259ENST00000498271 PTH2Q96A98 100 aa11.63□□□□□ -0.55
C4A-259ENST00000498271 RITA1Q96K30 269 aa11.63□□□□□ -0.55
C4A-259ENST00000498271 OPRPNQ99935 248 aaPredicted RBP11.63□□□□□ -0.55
C4A-259ENST00000498271 IGKV1OR2-108A0A075B7D4 117 aa11.62□□□□□ -0.55
C4A-259ENST00000498271 LRRC75A-AS1Q8N1F1 130 aa11.62□□□□□ -0.55
C4A-259ENST00000498271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.62□□□□□ -0.55
C4A-259ENST00000498271 IGKV2-29A2NJV5 120 aaPredicted RBP11.62□□□□□ -0.55
C4A-259ENST00000498271 ODF3L1Q8IXM7 274 aa11.62□□□□□ -0.55
C4A-259ENST00000498271 MBD6Q96DN6 1003 aa11.62□□□□□ -0.55
C4A-259ENST00000498271 PDE6GP18545 87 aa11.61□□□□□ -0.55
C4A-259ENST00000498271 BUB3O43684 328 aa11.61□□□□□ -0.55
C4A-259ENST00000498271 DAD1P61803 113 aa11.61□□□□□ -0.55
C4A-259ENST00000498271 FAM208BQ5VWN6 2430 aa11.61□□□□□ -0.55
C4A-259ENST00000498271 FUSP35637 526 aaKnown RBP eCLIP11.61□□□□□ -0.55
C4A-259ENST00000498271 KLK5Q9Y337 293 aaPredicted RBP11.61□□□□□ -0.55
C4A-259ENST00000498271 NUP210LQ5VU65 1888 aa11.6□□□□□ -0.55
C4A-259ENST00000498271 IGHV1-58A0A0C4DH39 117 aa11.6□□□□□ -0.55
C4A-259ENST00000498271 HOXB4P17483 251 aaPredicted RBP11.6□□□□□ -0.55
C4A-259ENST00000498271 ZNF503Q96F45 646 aa11.6□□□□□ -0.55
C4A-259ENST00000498271 SPATA25Q9BR10 227 aa11.6□□□□□ -0.55
C4A-259ENST00000498271 CTSGP08311 255 aa11.6□□□□□ -0.55
C4A-259ENST00000498271 C16orf54Q6UWD8 224 aa11.6□□□□□ -0.55
C4A-259ENST00000498271 TP53TG3Q9ULZ0 132 aa11.6□□□□□ -0.55
C4A-259ENST00000498271 PTPRSQ13332 1948 aa11.6□□□□□ -0.55
C4A-259ENST00000498271 DAZ2Q13117 558 aaKnown RBP11.59□□□□□ -0.55
C4A-259ENST00000498271 DAZ4Q86SG3 579 aaKnown RBP11.59□□□□□ -0.55
C4A-259ENST00000498271 DAZ3Q9NR90 486 aaKnown RBP11.59□□□□□ -0.55
C4A-259ENST00000498271 C3orf22Q8N5N4 141 aa11.59□□□□□ -0.55
C4A-259ENST00000498271 PRO3102Q9H379 93 aa11.59□□□□□ -0.55
C4A-259ENST00000498271 PRORYQ9H606 182 aa11.59□□□□□ -0.55
C4A-259ENST00000498271 PTPRQQ9UMZ3 2332 aa11.59□□□□□ -0.55
C4A-259ENST00000498271 TRAV4A0A0B4J268 109 aa11.59□□□□□ -0.55
C4A-259ENST00000498271 PRB1P04280 392 aa11.59□□□□□ -0.55
C4A-259ENST00000498271 GDF5OSQ5U4N7 250 aa11.59□□□□□ -0.55
C4A-259ENST00000498271 CLEC2BQ92478 149 aa11.59□□□□□ -0.55
C4A-259ENST00000498271 COX7B2Q8TF08 81 aa11.58□□□□□ -0.56
C4A-259ENST00000498271 MLST8Q9BVC4 326 aa11.58□□□□□ -0.56
C4A-259ENST00000498271 VPREB3Q9UKI3 123 aa11.58□□□□□ -0.56
C4A-259ENST00000498271 NOTCH2Q04721 2471 aa11.58□□□□□ -0.56
C4A-259ENST00000498271 PIEZO1Q92508 2521 aa11.58□□□□□ -0.56
C4A-259ENST00000498271 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.58□□□□□ -0.565e-14■□□□□ 10.1
C4A-259ENST00000498271 MAPK1IP1LQ8NDC0 245 aa11.58□□□□□ -0.56
C4A-259ENST00000498271 VSIG2Q96IQ7 327 aa11.58□□□□□ -0.56
C4A-259ENST00000498271 MIAQ16674 131 aa11.58□□□□□ -0.56
C4A-259ENST00000498271 TMEM61Q8N0U2 210 aa11.58□□□□□ -0.56
C4A-259ENST00000498271 IGLV2-23P01705 113 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 MP68P56378 58 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 U3KQE9 123 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 ACACBO00763 2458 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 TMEM256-PLSCR3K7ERE1 68 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 P0DMU3 169 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 FAM231AP0DMU4 169 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 FAM231CP0DMU5 169 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
C4A-259ENST00000498271 CFHR3Q02985 330 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 IMUPQ9GZP8 106 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 ATP5EP2Q5VTU8 51 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 EML6Q6ZMW3 1958 aa11.57□□□□□ -0.56
C4A-259ENST00000498271 BRWD1-AS2P59051 145 aa11.56□□□□□ -0.56
C4A-259ENST00000498271 ZNF295-AS1Q8N0V1 137 aa11.56□□□□□ -0.56
C4A-259ENST00000498271 MDFICQ9P1T7 246 aa11.56□□□□□ -0.56
C4A-259ENST00000498271 PLCE1Q9P212 2302 aa11.56□□□□□ -0.56
C4A-259ENST00000498271 E7EUB6 86 aa11.56□□□□□ -0.56
C4A-259ENST00000498271 NCKAP5O14513 1909 aa11.55□□□□□ -0.56
C4A-259ENST00000498271 TEX22C9J3V5 150 aa11.55□□□□□ -0.56
C4A-259ENST00000498271 PROP1O75360 226 aa11.55□□□□□ -0.56
C4A-259ENST00000498271 LOXL1Q08397 574 aaPredicted RBP11.55□□□□□ -0.56
C4A-259ENST00000498271 COX7A2LO14548 114 aa11.55□□□□□ -0.56
C4A-259ENST00000498271 C20orf203Q8NBC4 194 aa11.55□□□□□ -0.56
C4A-259ENST00000498271 LECT2O14960 151 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms