RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 RPS10P5Q9NQ39 176 aa9.47□□□□□ -0.89
PTPN7-218ENST00000496197 A8MWV9 139 aa9.46□□□□□ -0.9
PTPN7-218ENST00000496197 EVI2AP22794 236 aa9.46□□□□□ -0.9
PTPN7-218ENST00000496197 LINC00315P59091 139 aa9.46□□□□□ -0.9
PTPN7-218ENST00000496197 TWIST1Q15672 202 aa9.46□□□□□ -0.9
PTPN7-218ENST00000496197 WDR73Q6P4I2 378 aa9.46□□□□□ -0.9
PTPN7-218ENST00000496197 A0A087WWC5 75 aa9.45□□□□□ -0.9
PTPN7-218ENST00000496197 A0A1B0GUT8 65 aa9.45□□□□□ -0.9
PTPN7-218ENST00000496197 SNAPINO95295 136 aa9.45□□□□□ -0.9
PTPN7-218ENST00000496197 TMEM88Q6PEY1 159 aa9.45□□□□□ -0.9
PTPN7-218ENST00000496197 CEMP1Q6PRD7 247 aaPredicted RBP9.45□□□□□ -0.9
PTPN7-218ENST00000496197 VSIG2Q96IQ7 327 aa9.45□□□□□ -0.9
PTPN7-218ENST00000496197 CTDSP1Q9GZU7 261 aa9.45□□□□□ -0.9
PTPN7-218ENST00000496197 Q9UF83 564 aa9.45□□□□□ -0.9
PTPN7-218ENST00000496197 TRGV4A0A0C4DH28 118 aa9.44□□□□□ -0.9
PTPN7-218ENST00000496197 A0A0J9YY99 117 aa9.44□□□□□ -0.9
PTPN7-218ENST00000496197 GATA1P15976 413 aaPredicted RBP9.44□□□□□ -0.9
PTPN7-218ENST00000496197 MRPL54Q6P161 138 aaKnown RBP9.44□□□□□ -0.9
PTPN7-218ENST00000496197 AP1S3Q96PC3 154 aa9.44□□□□□ -0.9
PTPN7-218ENST00000496197 DYNC2H1Q8NCM8 4307 aaKnown RBP9.43□□□□□ -0.9
PTPN7-218ENST00000496197 TRAV26-1A0A087WT03 109 aa9.43□□□□□ -0.9
PTPN7-218ENST00000496197 LOC100131303A0A0U1RQF7 123 aa9.43□□□□□ -0.9
PTPN7-218ENST00000496197 A0A1B0GXF2 115 aa9.43□□□□□ -0.9
PTPN7-218ENST00000496197 CRYBA4P53673 196 aa9.43□□□□□ -0.9
PTPN7-218ENST00000496197 TMEM242Q9NWH2 141 aa9.43□□□□□ -0.9
PTPN7-218ENST00000496197 URGCP-MRPS24S4R325 110 aa9.43□□□□□ -0.9
PTPN7-218ENST00000496197 NUPR2A6NF83 97 aa9.42□□□□□ -0.9
PTPN7-218ENST00000496197 IGLL5B9A064 214 aa9.42□□□□□ -0.9
PTPN7-218ENST00000496197 P0DMU3 169 aa9.42□□□□□ -0.9
PTPN7-218ENST00000496197 FAM231AP0DMU4 169 aa9.42□□□□□ -0.9
PTPN7-218ENST00000496197 FAM231CP0DMU5 169 aa9.42□□□□□ -0.9
PTPN7-218ENST00000496197 CASC10Q5T4H9 136 aa9.42□□□□□ -0.9
PTPN7-218ENST00000496197 ZFP2Q6ZN57 461 aa9.42□□□□□ -0.9
PTPN7-218ENST00000496197 SLC25A29Q8N8R3 303 aa9.42□□□□□ -0.9
PTPN7-218ENST00000496197 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
PTPN7-218ENST00000496197 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
PTPN7-218ENST00000496197 BORCS7Q96B45 105 aa9.41□□□□□ -0.9
PTPN7-218ENST00000496197 IMMP2LQ96T52 175 aa9.41□□□□□ -0.9
PTPN7-218ENST00000496197 PRO0255Q9UI72 69 aa9.41□□□□□ -0.9
PTPN7-218ENST00000496197 RHODO00212 210 aa9.4□□□□□ -0.9
PTPN7-218ENST00000496197 MGPP08493 103 aa9.4□□□□□ -0.9
PTPN7-218ENST00000496197 CAMPP49913 170 aa9.4□□□□□ -0.9
PTPN7-218ENST00000496197 RIGQ13278 110 aa9.4□□□□□ -0.9
PTPN7-218ENST00000496197 ZNF56Q15929 161 aa9.4□□□□□ -0.9
PTPN7-218ENST00000496197 RNF185Q96GF1 192 aa9.4□□□□□ -0.9
PTPN7-218ENST00000496197 DPH3P1Q9H4G8 78 aa9.4□□□□□ -0.9
PTPN7-218ENST00000496197 TRAV26-2A0A0B4J265 109 aa9.4□□□□□ -0.91
PTPN7-218ENST00000496197 PAX4O43316 350 aa9.4□□□□□ -0.91
PTPN7-218ENST00000496197 ATP6V1G1O75348 118 aa9.4□□□□□ -0.91
PTPN7-218ENST00000496197 GAS8-AS1O95177 125 aa9.4□□□□□ -0.91
PTPN7-218ENST00000496197 CBLN2Q8IUK8 224 aa9.4□□□□□ -0.91
PTPN7-218ENST00000496197 AMN1Q8IY45 258 aa9.4□□□□□ -0.91
PTPN7-218ENST00000496197 TMEM191AQ9H0A3 160 aa9.4□□□□□ -0.91
PTPN7-218ENST00000496197 APLNQ9ULZ1 77 aa9.4□□□□□ -0.91
PTPN7-218ENST00000496197 TRBV6-4A0A1B0GX49 114 aa9.39□□□□□ -0.91
PTPN7-218ENST00000496197 C3orf84H3BNL1 204 aa9.39□□□□□ -0.91
PTPN7-218ENST00000496197 K7EQD1 137 aa9.39□□□□□ -0.91
PTPN7-218ENST00000496197 CIDEAO60543 219 aa9.39□□□□□ -0.91
PTPN7-218ENST00000496197 SMIM17P0DL12 118 aa9.39□□□□□ -0.91
PTPN7-218ENST00000496197 HBBP68871 147 aa9.39□□□□□ -0.91
PTPN7-218ENST00000496197 SUMO4Q6EEV6 95 aa9.39□□□□□ -0.91
PTPN7-218ENST00000496197 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
PTPN7-218ENST00000496197 A0A096LPF7 62 aa9.38□□□□□ -0.91
PTPN7-218ENST00000496197 RAB4BP61018 213 aa9.38□□□□□ -0.91
PTPN7-218ENST00000496197 ELOBQ15370 118 aa9.38□□□□□ -0.91
PTPN7-218ENST00000496197 KCNIP4Q6PIL6 250 aa9.38□□□□□ -0.91
PTPN7-218ENST00000496197 ATP5L2Q7Z4Y8 100 aa9.38□□□□□ -0.91
PTPN7-218ENST00000496197 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
PTPN7-218ENST00000496197 BTF3L4Q96K17 158 aa9.38□□□□□ -0.91
PTPN7-218ENST00000496197 LYSTQ99698 3801 aa9.38□□□□□ -0.91
PTPN7-218ENST00000496197 TENM2Q9NT68 2774 aa9.37□□□□□ -0.91
PTPN7-218ENST00000496197 PLECQ15149 4684 aaKnown RBP9.37□□□□□ -0.91
PTPN7-218ENST00000496197 TGIF2-C20orf24A0A0A6YYL0 155 aa9.37□□□□□ -0.91
PTPN7-218ENST00000496197 F5H697 171 aa9.37□□□□□ -0.91
PTPN7-218ENST00000496197 SCO1O75880 301 aa9.37□□□□□ -0.91
PTPN7-218ENST00000496197 NUDT3O95989 172 aa9.37□□□□□ -0.91
PTPN7-218ENST00000496197 GYPEP15421 78 aa9.37□□□□□ -0.91
PTPN7-218ENST00000496197 RAB4AP20338 218 aa9.37□□□□□ -0.91
PTPN7-218ENST00000496197 KLK5Q9Y337 293 aaPredicted RBP9.37□□□□□ -0.91
PTPN7-218ENST00000496197 H3BNG1 76 aa9.36□□□□□ -0.91
PTPN7-218ENST00000496197 M0QY20 66 aa9.36□□□□□ -0.91
PTPN7-218ENST00000496197 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
PTPN7-218ENST00000496197 SLAQ13239 276 aa9.36□□□□□ -0.91
PTPN7-218ENST00000496197 RHOHQ15669 191 aa9.36□□□□□ -0.91
PTPN7-218ENST00000496197 FAM210BQ96KR6 192 aa9.36□□□□□ -0.91
PTPN7-218ENST00000496197 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 A0A1B0GW15 77 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 GAGE12JA6NER3 117 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 SMKR1H3BMG3 65 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 NCR2O95944 276 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 S100PP25815 95 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 GAGE1Q13065 139 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 GAGE4Q13068 117 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 GAGE5Q13069 117 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 MRPL51Q4U2R6 128 aaKnown RBP9.35□□□□□ -0.91
PTPN7-218ENST00000496197 GAGE13Q4V321 117 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 FAM104BQ5XKR9 115 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 SMIM15Q7Z3B0 74 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 NEXN-AS1Q8NBZ9 246 aa9.35□□□□□ -0.91
PTPN7-218ENST00000496197 RPL39LQ96EH5 51 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms