RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ERVFC1-1P60608 527 aa22.44■■□□□ 1.18
CBX4-203ENST00000494546 LINC01556Q5JQF7 62 aa22.44■■□□□ 1.18
CBX4-203ENST00000494546 SFRP2Q96HF1 295 aa22.44■■□□□ 1.18
CBX4-203ENST00000494546 EREGO14944 169 aa22.43■■□□□ 1.18
CBX4-203ENST00000494546 Q9UF83 564 aa22.43■■□□□ 1.18
CBX4-203ENST00000494546 SLC51BQ86UW2 128 aa22.42■■□□□ 1.18
CBX4-203ENST00000494546 DERL1Q9BUN8 251 aa22.42■■□□□ 1.18
CBX4-203ENST00000494546 BOLA1Q9Y3E2 137 aa22.41■■□□□ 1.18
CBX4-203ENST00000494546 hCG_2014768A0A024R1R8 64 aa22.4■■□□□ 1.18
CBX4-203ENST00000494546 IGHV3-30P01768 117 aa22.4■■□□□ 1.18
CBX4-203ENST00000494546 IGHV3-33P01772 117 aa22.4■■□□□ 1.18
CBX4-203ENST00000494546 LINC00694P0DN24 101 aa22.4■■□□□ 1.18
CBX4-203ENST00000494546 IGHV3-30-3P0DP02 117 aa22.4■■□□□ 1.18
CBX4-203ENST00000494546 IGHV3-30-5P0DP03 117 aa22.4■■□□□ 1.18
CBX4-203ENST00000494546 C11orf52Q96A22 123 aa22.4■■□□□ 1.18
CBX4-203ENST00000494546 AKAP14Q86UN6 197 aa22.38■■□□□ 1.17
CBX4-203ENST00000494546 CDK2AP2O75956 126 aa22.37■■□□□ 1.17
CBX4-203ENST00000494546 CXCL1P09341 107 aa22.37■■□□□ 1.17
CBX4-203ENST00000494546 KRTAP17-1Q9BYP8 105 aa22.37■■□□□ 1.17
CBX4-203ENST00000494546 A0A087WTM6 91 aa22.36■■□□□ 1.17
CBX4-203ENST00000494546 OR10AG1Q8NH19 301 aa22.36■■□□□ 1.17
CBX4-203ENST00000494546 IBA57-AS1B1ANH7 110 aa22.35■■□□□ 1.17
CBX4-203ENST00000494546 FUSP35637 526 aaKnown RBP eCLIP22.35■■□□□ 1.175e-6■■■■□ 19.3
CBX4-203ENST00000494546 CENPWQ5EE01 88 aa22.35■■□□□ 1.17
CBX4-203ENST00000494546 IFNA1P01562 189 aa22.34■■□□□ 1.17
CBX4-203ENST00000494546 LRP1BQ9NZR2 4599 aa22.34■■□□□ 1.17
CBX4-203ENST00000494546 MUC21A0A0G2JKD1 596 aa22.33■■□□□ 1.17
CBX4-203ENST00000494546 MUC21A0A140T8X8 626 aa22.33■■□□□ 1.17
CBX4-203ENST00000494546 MEF2BQ02080 365 aaPredicted RBP22.33■■□□□ 1.17
CBX4-203ENST00000494546 Q9HAA7 133 aa22.33■■□□□ 1.17
CBX4-203ENST00000494546 PGPEP1Q9NXJ5 209 aa22.33■■□□□ 1.17
CBX4-203ENST00000494546 RYR1P21817 5038 aa22.31■■□□□ 1.16
CBX4-203ENST00000494546 RAB19A4D1S5 217 aa22.31■■□□□ 1.16
CBX4-203ENST00000494546 SNAI2O43623 268 aa22.31■■□□□ 1.16
CBX4-203ENST00000494546 PSCAO43653 123 aa22.31■■□□□ 1.16
CBX4-203ENST00000494546 PDE6DO43924 150 aa22.31■■□□□ 1.16
CBX4-203ENST00000494546 SPANXN1Q5VSR9 72 aa22.31■■□□□ 1.16
CBX4-203ENST00000494546 Q8N3U1 123 aa22.31■■□□□ 1.16
CBX4-203ENST00000494546 C9orf62Q8N4C0 152 aa22.31■■□□□ 1.16
CBX4-203ENST00000494546 SSBP4Q9BWG4 385 aaPredicted RBP22.31■■□□□ 1.16
CBX4-203ENST00000494546 A0A087WWC5 75 aa22.3■■□□□ 1.16
CBX4-203ENST00000494546 BCL2P10415 239 aa22.3■■□□□ 1.16
CBX4-203ENST00000494546 SSTP61278 116 aa22.3■■□□□ 1.16
CBX4-203ENST00000494546 OR5AL1P0C617 328 aa22.29■■□□□ 1.16
CBX4-203ENST00000494546 GNG4P50150 75 aa22.29■■□□□ 1.16
CBX4-203ENST00000494546 MED9Q9NWA0 146 aa22.29■■□□□ 1.16
CBX4-203ENST00000494546 TRBV10-1A0A0K0K1A3 114 aa22.28■■□□□ 1.16
CBX4-203ENST00000494546 IGLV2-8P01709 118 aa22.28■■□□□ 1.16
CBX4-203ENST00000494546 ZNF56Q15929 161 aa22.28■■□□□ 1.16
CBX4-203ENST00000494546 DAZAP1Q96EP5 407 aaKnown RBP22.28■■□□□ 1.16
CBX4-203ENST00000494546 RPL36AP83881 106 aaKnown RBP22.27■■□□□ 1.16
CBX4-203ENST00000494546 RPL36ALQ969Q0 106 aaKnown RBP22.27■■□□□ 1.16
CBX4-203ENST00000494546 RAB4BP61018 213 aa22.26■■□□□ 1.15
CBX4-203ENST00000494546 CDPF1Q6NVV7 123 aa22.26■■□□□ 1.15
CBX4-203ENST00000494546 VAX2Q9UIW0 290 aa22.26■■□□□ 1.15
CBX4-203ENST00000494546 MAPKAPK5-AS1Q8N8E1 139 aa22.25■■□□□ 1.15
CBX4-203ENST00000494546 GZMBP10144 247 aa22.24■■□□□ 1.15
CBX4-203ENST00000494546 OR2D3Q8NGH3 330 aa22.24■■□□□ 1.15
CBX4-203ENST00000494546 TRBV7-3A0A075B6L6 115 aa22.23■■□□□ 1.15
CBX4-203ENST00000494546 LAGE3Q14657 143 aa22.23■■□□□ 1.15
CBX4-203ENST00000494546 SMIM12Q96EX1 92 aa22.23■■□□□ 1.15
CBX4-203ENST00000494546 TPPP3Q9BW30 176 aa22.23■■□□□ 1.15
CBX4-203ENST00000494546 HSPG2P98160 4391 aa22.22■■□□□ 1.15
CBX4-203ENST00000494546 DAZ4Q86SG3 579 aaKnown RBP22.22■■□□□ 1.15
CBX4-203ENST00000494546 DAZ3Q9NR90 486 aaKnown RBP22.22■■□□□ 1.15
CBX4-203ENST00000494546 C19orf71A6NCJ1 209 aa22.21■■□□□ 1.15
CBX4-203ENST00000494546 F5H697 171 aa22.21■■□□□ 1.15
CBX4-203ENST00000494546 TAGLN2P37802 199 aaKnown RBP22.21■■□□□ 1.15
CBX4-203ENST00000494546 RPS20P60866 119 aaKnown RBP22.21■■□□□ 1.15
CBX4-203ENST00000494546 UBE2D3P61077 147 aa22.21■■□□□ 1.15
CBX4-203ENST00000494546 UBE2D2P62837 147 aa22.21■■□□□ 1.15
CBX4-203ENST00000494546 ALKAL2Q6UX46 152 aa22.21■■□□□ 1.15
CBX4-203ENST00000494546 TRBV20OR9-2A0A075B6H5 130 aa22.2■■□□□ 1.14
CBX4-203ENST00000494546 FER1L6-AS1Q8NA97 138 aa22.2■■□□□ 1.14
CBX4-203ENST00000494546 KRTAP4-5Q9BYR2 181 aa22.2■■□□□ 1.14
CBX4-203ENST00000494546 URGCP-MRPS24S4R325 110 aa22.2■■□□□ 1.14
CBX4-203ENST00000494546 DNAH5Q8TE73 4624 aa22.19■■□□□ 1.14
CBX4-203ENST00000494546 RBFOX3A6NFN3 312 aa22.19■■□□□ 1.14
CBX4-203ENST00000494546 P01737 135 aa22.19■■□□□ 1.14
CBX4-203ENST00000494546 SMIM17P0DL12 118 aa22.19■■□□□ 1.14
CBX4-203ENST00000494546 NEXN-AS1Q8NBZ9 246 aa22.19■■□□□ 1.14
CBX4-203ENST00000494546 OR10G8Q8NGN5 311 aa22.19■■□□□ 1.14
CBX4-203ENST00000494546 AP1S3Q96PC3 154 aa22.19■■□□□ 1.14
CBX4-203ENST00000494546 LRCOL1A6NCL2 159 aa22.18■■□□□ 1.14
CBX4-203ENST00000494546 IGLC6P0CF74 106 aa22.17■■□□□ 1.14
CBX4-203ENST00000494546 NIT1Q86X76 327 aa22.17■■□□□ 1.14
CBX4-203ENST00000494546 TM2D2Q9BX73 214 aa22.17■■□□□ 1.14
CBX4-203ENST00000494546 BIN3Q9NQY0 253 aa22.17■■□□□ 1.14
CBX4-203ENST00000494546 PCLOQ9Y6V0 5065 aa22.16■■□□□ 1.14
CBX4-203ENST00000494546 TRAV8-3A0A0A6YYJ7 113 aa22.16■■□□□ 1.14
CBX4-203ENST00000494546 TOR2AQ5JU69 321 aa22.16■■□□□ 1.14
CBX4-203ENST00000494546 XKRY2A2RUG3 117 aa22.15■■□□□ 1.14
CBX4-203ENST00000494546 KIF25-AS1Q9Y6Z4 181 aa22.15■■□□□ 1.14
CBX4-203ENST00000494546 BLOC1S1P78537 153 aa22.14■■□□□ 1.13
CBX4-203ENST00000494546 APOBP04114 4563 aaKnown RBP22.14■■□□□ 1.13
CBX4-203ENST00000494546 A0A087WX48 190 aa22.12■■□□□ 1.13
CBX4-203ENST00000494546 KRTAP10-1P60331 282 aa22.12■■□□□ 1.13
CBX4-203ENST00000494546 CACNG7P62955 275 aa22.12■■□□□ 1.13
CBX4-203ENST00000494546 KCNIP4Q6PIL6 250 aa22.12■■□□□ 1.13
CBX4-203ENST00000494546 MGPP08493 103 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms