RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 SMIM6P0DI80 62 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 RBP2P50120 134 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 MRPS10P82664 201 aaKnown RBP1.74□□□□□ -2.13
HFM1-208ENST00000488023 ASB16-AS1Q495Z4 193 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 TEX261Q6UWH6 196 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 LYPD1Q8N2G4 141 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 SNRNP25Q9BV90 132 aaKnown RBP1.74□□□□□ -2.13
HFM1-208ENST00000488023 SAR1AQ9NR31 198 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 NOP16Q9Y3C1 178 aaKnown RBP1.74□□□□□ -2.13
HFM1-208ENST00000488023 MYH1P12882 1939 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 MYH6P13533 1939 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 COL11A1P12107 1806 aaPredicted RBP1.74□□□□□ -2.13
HFM1-208ENST00000488023 NHSQ6T4R5 1651 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 CDC42BPGQ6DT37 1551 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 CCDC141Q6ZP82 1450 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 CASKIN1Q8WXD9 1431 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 ATP11AUNQ6ZP68 121 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 C5orf17Q8NAS9 161 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 ATP6V0E2Q8NHE4 81 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 ZNF462Q96JM2 2506 aa1.73□□□□□ -2.13
HFM1-208ENST00000488023 ALS2Q96Q42 1657 aa1.73□□□□□ -2.13
HFM1-208ENST00000488023 CCNB3Q8WWL7 1395 aa1.73□□□□□ -2.13
HFM1-208ENST00000488023 J3QKU1 62 aa1.73□□□□□ -2.13
HFM1-208ENST00000488023 YPEL1O60688 119 aa1.73□□□□□ -2.13
HFM1-208ENST00000488023 BRD3OSQ6XYD6 125 aa1.73□□□□□ -2.13
HFM1-208ENST00000488023 Q6ZRN7 208 aaPredicted RBP1.73□□□□□ -2.13
HFM1-208ENST00000488023 AGPAT4-IT1Q9H0P7 198 aa1.73□□□□□ -2.13
HFM1-208ENST00000488023 TAS2R8Q9NYW2 309 aa1.73□□□□□ -2.13
HFM1-208ENST00000488023 XRN1Q8IZH2 1706 aaKnown RBP1.73□□□□□ -2.13
HFM1-208ENST00000488023 ADGRB1O14514 1584 aa1.73□□□□□ -2.13
HFM1-208ENST00000488023 HELZP42694 1942 aaKnown RBP1.72□□□□□ -2.13
HFM1-208ENST00000488023 MYH13Q9UKX3 1938 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 NAIPQ13075 1403 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 KNDC1Q76NI1 1749 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 LMO7Q8WWI1 1683 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 SCN3AQ9NY46 2000 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 IFITM5A6NNB3 132 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 F8W1H4 67 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 CCL16O15467 120 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 HYPMO75409 117 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 ADCYAP1P18509 176 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 SLC25A26Q70HW3 274 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 COA5Q86WW8 74 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 MYLKQ15746 1914 aa1.72□□□□□ -2.13
HFM1-208ENST00000488023 BAZ2BQ9UIF8 2168 aaKnown RBP1.71□□□□□ -2.14
HFM1-208ENST00000488023 J3QLW9 94 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 RNASE3P12724 160 aaKnown RBP1.71□□□□□ -2.14
HFM1-208ENST00000488023 GNG4P50150 75 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 BTG2P78543 158 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 LINC01545Q5VT33 79 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 C15orf53Q8NAA6 179 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 PATE1Q8WXA2 126 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 LSM10Q969L4 123 aaKnown RBP1.71□□□□□ -2.14
HFM1-208ENST00000488023 PPP3R2Q96LZ3 170 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 LINC00052Q96N35 136 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 REG4Q9BYZ8 158 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 ZFP30Q9Y2G7 519 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 ZDBF2Q9HCK1 2354 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 BRWD1Q9NSI6 2320 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 MUC4Q99102 2169 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 BTAF1O14981 1849 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 TFF1P04155 84 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 PPP3R1P63098 170 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 C10orf55Q5SWW7 151 aa1.71□□□□□ -2.14
HFM1-208ENST00000488023 DOCK10Q96BY6 2186 aa1.7□□□□□ -2.14
HFM1-208ENST00000488023 FREM3P0C091 2139 aa1.7□□□□□ -2.14
HFM1-208ENST00000488023 TRAV17A0A0B4J275 112 aa1.7□□□□□ -2.14
HFM1-208ENST00000488023 KLF7O75840 302 aaPredicted RBP1.7□□□□□ -2.14
HFM1-208ENST00000488023 CATR1Q13166 79 aa1.7□□□□□ -2.14
HFM1-208ENST00000488023 VSTM2AQ8TAG5 236 aa1.7□□□□□ -2.14
HFM1-208ENST00000488023 RERGLQ9H628 205 aa1.7□□□□□ -2.14
HFM1-208ENST00000488023 ORMDL1Q9P0S3 153 aa1.7□□□□□ -2.14
HFM1-208ENST00000488023 EIF2AK4Q9P2K8 1649 aaKnown RBP1.7□□□□□ -2.14
HFM1-208ENST00000488023 PCNTO95613 3336 aa1.7□□□□□ -2.14
HFM1-208ENST00000488023 SCN11AQ9UI33 1791 aa1.7□□□□□ -2.14
HFM1-208ENST00000488023 TJP1Q07157 1748 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 FN1P02751 2386 aaKnown RBP1.69□□□□□ -2.14
HFM1-208ENST00000488023 KMT2BQ9UMN6 2715 aaPredicted RBP1.69□□□□□ -2.14
HFM1-208ENST00000488023 TRBV6-5A0A0K0K1A5 114 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 CCL25O15444 150 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 IGKCP01834 107 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 IL5P05113 134 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 IGKV4-1P06312 121 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 PIRTP0C851 137 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 IL7P13232 177 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 COX7CP15954 63 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 TPPP2P59282 170 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.69□□□□□ -2.14
HFM1-208ENST00000488023 DYNLRB2Q8TF09 96 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 ZNF431Q8TF32 576 aaPredicted RBP1.69□□□□□ -2.14
HFM1-208ENST00000488023 LIMD2Q9BT23 127 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 NAA60Q9H7X0 242 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 TMEM242Q9NWH2 141 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 LTN1O94822 1766 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 FAM208BQ5VWN6 2430 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 CDC42BPAQ5VT25 1732 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 ABCC6O95255 1503 aa1.69□□□□□ -2.14
HFM1-208ENST00000488023 HEATR1Q9H583 2144 aaKnown RBP1.69□□□□□ -2.14
HFM1-208ENST00000488023 ATG2AQ2TAZ0 1938 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms