RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CIDEAO60543 219 aa14.07□□□□□ -0.16
CTSA-206ENST00000480961 NXPH4O95158 308 aa14.07□□□□□ -0.16
CTSA-206ENST00000480961 MRPL23Q16540 153 aaKnown RBP14.07□□□□□ -0.16
CTSA-206ENST00000480961 FAM74A3Q4VXF1 159 aa14.07□□□□□ -0.16
CTSA-206ENST00000480961 LYZL1Q6UWQ5 148 aa14.07□□□□□ -0.16
CTSA-206ENST00000480961 ZFP2Q6ZN57 461 aa14.07□□□□□ -0.16
CTSA-206ENST00000480961 SMDT1Q9H4I9 107 aa14.07□□□□□ -0.16
CTSA-206ENST00000480961 M0R2N4 97 aa14.06□□□□□ -0.16
CTSA-206ENST00000480961 SRIP30626 198 aa14.06□□□□□ -0.16
CTSA-206ENST00000480961 C14orf178Q8N769 122 aaPredicted RBP14.06□□□□□ -0.16
CTSA-206ENST00000480961 MSRB1Q9NZV6 116 aa14.06□□□□□ -0.16
CTSA-206ENST00000480961 Q9UF83 564 aa14.06□□□□□ -0.16
CTSA-206ENST00000480961 TRBV6-4A0A1B0GX49 114 aa14.05□□□□□ -0.16
CTSA-206ENST00000480961 RPL23P62829 140 aaKnown RBP14.05□□□□□ -0.16
CTSA-206ENST00000480961 SOHLH1Q5JUK2 328 aa14.05□□□□□ -0.16
CTSA-206ENST00000480961 FAM231DQ6ZW35 169 aa14.05□□□□□ -0.16
CTSA-206ENST00000480961 PRADC1Q9BSG0 188 aa14.05□□□□□ -0.16
CTSA-206ENST00000480961 RHOHQ15669 191 aa14.04□□□□□ -0.16
CTSA-206ENST00000480961 ADIRFQ15847 76 aa14.04□□□□□ -0.16
CTSA-206ENST00000480961 NEGR1Q7Z3B1 354 aa14.04□□□□□ -0.16
CTSA-206ENST00000480961 GTSF1Q8WW33 167 aa14.04□□□□□ -0.16
CTSA-206ENST00000480961 NAT8Q9UHE5 227 aa14.04□□□□□ -0.16
CTSA-206ENST00000480961 RHODO00212 210 aa14.03□□□□□ -0.16
CTSA-206ENST00000480961 LYPD5Q6UWN5 251 aa14.03□□□□□ -0.16
CTSA-206ENST00000480961 ZNRF2Q8NHG8 242 aa14.03□□□□□ -0.16
CTSA-206ENST00000480961 NACAE9PAV3 2078 aa14.03□□□□□ -0.16
CTSA-206ENST00000480961 A0A1W2PPQ1 181 aa14.02□□□□□ -0.17
CTSA-206ENST00000480961 GAGE12JA6NER3 117 aa14.02□□□□□ -0.17
CTSA-206ENST00000480961 F2Z2F3 143 aa14.02□□□□□ -0.17
CTSA-206ENST00000480961 CACNG7P62955 275 aa14.02□□□□□ -0.17
CTSA-206ENST00000480961 GAGE1Q13065 139 aa14.02□□□□□ -0.17
CTSA-206ENST00000480961 GAGE4Q13068 117 aa14.02□□□□□ -0.17
CTSA-206ENST00000480961 GAGE5Q13069 117 aa14.02□□□□□ -0.17
CTSA-206ENST00000480961 GAGE13Q4V321 117 aa14.02□□□□□ -0.17
CTSA-206ENST00000480961 ISOC2Q96AB3 205 aa14.02□□□□□ -0.17
CTSA-206ENST00000480961 OSTCQ9NRP0 149 aa14.01□□□□□ -0.17
CTSA-206ENST00000480961 MRPS16Q9Y3D3 137 aaKnown RBP14.01□□□□□ -0.17
CTSA-206ENST00000480961 A8MWL6 223 aa14□□□□□ -0.17
CTSA-206ENST00000480961 NTF3P20783 257 aa14□□□□□ -0.17
CTSA-206ENST00000480961 CTRLP40313 264 aa14□□□□□ -0.17
CTSA-206ENST00000480961 FAM3BP58499 235 aaPredicted RBP14□□□□□ -0.17
CTSA-206ENST00000480961 ZNF56Q15929 161 aa14□□□□□ -0.17
CTSA-206ENST00000480961 PGLYRP4Q96LB8 373 aa14□□□□□ -0.17
CTSA-206ENST00000480961 AP1S3Q96PC3 154 aa14□□□□□ -0.17
CTSA-206ENST00000480961 KIF25-AS1Q9Y6Z4 181 aa14□□□□□ -0.17
CTSA-206ENST00000480961 F5H697 171 aa13.99□□□□□ -0.17
CTSA-206ENST00000480961 SMIM17P0DL12 118 aa13.99□□□□□ -0.17
CTSA-206ENST00000480961 TWIST1Q15672 202 aa13.99□□□□□ -0.17
CTSA-206ENST00000480961 Q9H8V8 135 aa13.99□□□□□ -0.17
CTSA-206ENST00000480961 DNAH17Q9UFH2 4485 aa13.99□□□□□ -0.17
CTSA-206ENST00000480961 LINC00315P59091 139 aa13.98□□□□□ -0.17
CTSA-206ENST00000480961 C15orf54Q8N8G6 183 aa13.98□□□□□ -0.17
CTSA-206ENST00000480961 OR10G8Q8NGN5 311 aa13.98□□□□□ -0.17
CTSA-206ENST00000480961 V9GYV3 84 aa13.98□□□□□ -0.17
CTSA-206ENST00000480961 MGPP08493 103 aa13.97□□□□□ -0.17
CTSA-206ENST00000480961 EVI2AP22794 236 aa13.97□□□□□ -0.17
CTSA-206ENST00000480961 RAB4BP61018 213 aa13.97□□□□□ -0.17
CTSA-206ENST00000480961 CT83Q5H943 113 aa13.97□□□□□ -0.17
CTSA-206ENST00000480961 TSKUQ8WUA8 353 aa13.97□□□□□ -0.17
CTSA-206ENST00000480961 FRAS1Q86XX4 4008 aa13.96□□□□□ -0.17
CTSA-206ENST00000480961 WDR73Q6P4I2 378 aa13.96□□□□□ -0.17
CTSA-206ENST00000480961 ATP6V0E2Q8NHE4 81 aa13.96□□□□□ -0.17
CTSA-206ENST00000480961 UPK3BQ9BT76 320 aa13.96□□□□□ -0.17
CTSA-206ENST00000480961 FOXA3P55318 350 aaPredicted RBP13.95□□□□□ -0.18
CTSA-206ENST00000480961 SH2D6Q7Z4S9 175 aa13.95□□□□□ -0.18
CTSA-206ENST00000480961 CNFNQ9BYD5 112 aa13.95□□□□□ -0.18
CTSA-206ENST00000480961 FAT2Q9NYQ8 4349 aa13.95□□□□□ -0.18
CTSA-206ENST00000480961 NBDYA0A0U1RRE5 68 aa13.94□□□□□ -0.18
CTSA-206ENST00000480961 HIGD1CA8MV81 97 aa13.94□□□□□ -0.18
CTSA-206ENST00000480961 Q6ZR54 194 aa13.94□□□□□ -0.18
CTSA-206ENST00000480961 EPPK1P58107 5090 aaKnown RBP13.94□□□□□ -0.18
CTSA-206ENST00000480961 TRGC1P0CF51 173 aa13.93□□□□□ -0.18
CTSA-206ENST00000480961 LINC00694P0DN24 101 aa13.93□□□□□ -0.18
CTSA-206ENST00000480961 COMMD7Q86VX2 200 aa13.93□□□□□ -0.18
CTSA-206ENST00000480961 WFDC10BQ8IUB3 73 aa13.93□□□□□ -0.18
CTSA-206ENST00000480961 GTSF1LQ9H1H1 148 aa13.92□□□□□ -0.18
CTSA-206ENST00000480961 TRBV10-1A0A0K0K1A3 114 aa13.91□□□□□ -0.18
CTSA-206ENST00000480961 SIVA1O15304 175 aa13.91□□□□□ -0.18
CTSA-206ENST00000480961 SUMO4Q6EEV6 95 aa13.91□□□□□ -0.18
CTSA-206ENST00000480961 NEXN-AS1Q8NBZ9 246 aa13.91□□□□□ -0.18
CTSA-206ENST00000480961 NUP35Q8NFH5 326 aa13.91□□□□□ -0.18
CTSA-206ENST00000480961 KRTAP1-5Q9BYS1 174 aa13.91□□□□□ -0.18
CTSA-206ENST00000480961 GFRA4Q9GZZ7 299 aa13.91□□□□□ -0.18
CTSA-206ENST00000480961 DPH3P1Q9H4G8 78 aa13.91□□□□□ -0.18
CTSA-206ENST00000480961 RPL36AP83881 106 aaKnown RBP13.9□□□□□ -0.18
CTSA-206ENST00000480961 UQCC3Q6UW78 93 aa13.9□□□□□ -0.18
CTSA-206ENST00000480961 RPL36ALQ969Q0 106 aaKnown RBP13.9□□□□□ -0.18
CTSA-206ENST00000480961 BORCS7Q96B45 105 aa13.9□□□□□ -0.18
CTSA-206ENST00000480961 A0A1B0GUT8 65 aa13.89□□□□□ -0.19
CTSA-206ENST00000480961 TMEM218A2RU14 115 aa13.89□□□□□ -0.19
CTSA-206ENST00000480961 FAM231BA6NCW3 169 aa13.89□□□□□ -0.19
CTSA-206ENST00000480961 TIRAPP58753 221 aa13.89□□□□□ -0.19
CTSA-206ENST00000480961 OR10J3Q5JRS4 329 aa13.89□□□□□ -0.19
CTSA-206ENST00000480961 TRBV7-3A0A075B6L6 115 aa13.88□□□□□ -0.19
CTSA-206ENST00000480961 IGHV3-38A0A0C4DH36 116 aa13.88□□□□□ -0.19
CTSA-206ENST00000480961 M0QY20 66 aa13.88□□□□□ -0.19
CTSA-206ENST00000480961 UBE2D3P61077 147 aa13.88□□□□□ -0.19
CTSA-206ENST00000480961 UBE2D2P62837 147 aa13.88□□□□□ -0.19
CTSA-206ENST00000480961 SMIM15Q7Z3B0 74 aa13.88□□□□□ -0.19
CTSA-206ENST00000480961 TRAV26-2A0A0B4J265 109 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms