RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 FAM236AA0A1B0GUQ0 79 aa0.15□□□□□ -2.39
PRPF40A-208ENST00000472760 FAM236BA0A1B0GV22 79 aa0.15□□□□□ -2.39
PRPF40A-208ENST00000472760 IGLC6P0CF74 106 aa0.15□□□□□ -2.39
PRPF40A-208ENST00000472760 COX6A2Q02221 97 aa0.15□□□□□ -2.39
PRPF40A-208ENST00000472760 VSTM2AQ8TAG5 236 aa0.15□□□□□ -2.39
PRPF40A-208ENST00000472760 SMIM3Q9BZL3 60 aa0.15□□□□□ -2.39
PRPF40A-208ENST00000472760 BATF3Q9NR55 127 aa0.15□□□□□ -2.39
PRPF40A-208ENST00000472760 TMEM242Q9NWH2 141 aa0.15□□□□□ -2.39
PRPF40A-208ENST00000472760 GSKIPQ9P0R6 139 aa0.15□□□□□ -2.39
PRPF40A-208ENST00000472760 ABCA1O95477 2261 aa0.15□□□□□ -2.39
PRPF40A-208ENST00000472760 DISP2A7MBM2 1401 aa0.14□□□□□ -2.39
PRPF40A-208ENST00000472760 JMJD1CQ15652 2540 aa0.14□□□□□ -2.39
PRPF40A-208ENST00000472760 TRBV7-1A0A0A6YYK4 115 aa0.14□□□□□ -2.39
PRPF40A-208ENST00000472760 J3QR89 54 aa0.14□□□□□ -2.39
PRPF40A-208ENST00000472760 M0R129 80 aa0.14□□□□□ -2.39
PRPF40A-208ENST00000472760 SPANXN1Q5VSR9 72 aa0.14□□□□□ -2.39
PRPF40A-208ENST00000472760 V9GYV3 84 aa0.14□□□□□ -2.39
PRPF40A-208ENST00000472760 ARHGEF10O15013 1369 aa0.14□□□□□ -2.39
PRPF40A-208ENST00000472760 UNC13BO14795 1591 aa0.14□□□□□ -2.39
PRPF40A-208ENST00000472760 ARPC5O15511 151 aa0.13□□□□□ -2.39
PRPF40A-208ENST00000472760 MIC13Q5XKP0 118 aa0.13□□□□□ -2.39
PRPF40A-208ENST00000472760 GPR98Q8WXG9 6306 aa0.13□□□□□ -2.39
PRPF40A-208ENST00000472760 ABCA4P78363 2273 aa0.12□□□□□ -2.39
PRPF40A-208ENST00000472760 NMBP08949 121 aa0.12□□□□□ -2.39
PRPF40A-208ENST00000472760 CTAGE3PQ8IX95 158 aa0.12□□□□□ -2.39
PRPF40A-208ENST00000472760 VIRMAQ69YN4 1812 aaKnown RBP0.12□□□□□ -2.39
PRPF40A-208ENST00000472760 PIEZO1Q92508 2521 aa0.11□□□□□ -2.39
PRPF40A-208ENST00000472760 M0R2Z0 102 aa0.11□□□□□ -2.39
PRPF40A-208ENST00000472760 PIRTP0C851 137 aa0.11□□□□□ -2.39
PRPF40A-208ENST00000472760 ACYP2P14621 99 aa0.11□□□□□ -2.39
PRPF40A-208ENST00000472760 FAM213BQ8TBF2 198 aa0.11□□□□□ -2.39
PRPF40A-208ENST00000472760 CACNA1HO95180 2353 aa0.1□□□□□ -2.39
PRPF40A-208ENST00000472760 TSPAN19P0C672 248 aa0.1□□□□□ -2.39
PRPF40A-208ENST00000472760 LINC00694P0DN24 101 aa0.1□□□□□ -2.39
PRPF40A-208ENST00000472760 RPL7L1Q6DKI1 246 aaKnown RBP0.1□□□□□ -2.39
PRPF40A-208ENST00000472760 Q96NJ1 140 aa0.1□□□□□ -2.39
PRPF40A-208ENST00000472760 PSMG3Q9BT73 122 aaPredicted RBP0.1□□□□□ -2.39
PRPF40A-208ENST00000472760 KIF13AQ9H1H9 1805 aa0.1□□□□□ -2.39
PRPF40A-208ENST00000472760 NCR2O95944 276 aa0.09□□□□□ -2.4
PRPF40A-208ENST00000472760 LRP1Q07954 4544 aaKnown RBP0.09□□□□□ -2.4
PRPF40A-208ENST00000472760 ABCA12Q86UK0 2595 aa0.08□□□□□ -2.4
PRPF40A-208ENST00000472760 ZFYVE26Q68DK2 2539 aa0.08□□□□□ -2.4
PRPF40A-208ENST00000472760 K7ERU9 68 aa0.08□□□□□ -2.4
PRPF40A-208ENST00000472760 RPRMQ9NS64 109 aa0.08□□□□□ -2.4
PRPF40A-208ENST00000472760 SCP2D1Q9UJQ7 156 aa0.08□□□□□ -2.4
PRPF40A-208ENST00000472760 A6NIN4 97 aa0.07□□□□□ -2.4
PRPF40A-208ENST00000472760 C9orf116Q5BN46 136 aaPredicted RBP0.07□□□□□ -2.4
PRPF40A-208ENST00000472760 SSC5DA1L4H1 1573 aa0.06□□□□□ -2.4
PRPF40A-208ENST00000472760 PRG4Q92954 1404 aaPredicted RBP0.06□□□□□ -2.4
PRPF40A-208ENST00000472760 TMEM14DPA8MWL7 114 aa0.06□□□□□ -2.4
PRPF40A-208ENST00000472760 Q6ZRX8 168 aa0.06□□□□□ -2.4
PRPF40A-208ENST00000472760 Q6ZUT4 128 aa0.06□□□□□ -2.4
PRPF40A-208ENST00000472760 C10orf82Q8WW14 230 aa0.06□□□□□ -2.4
PRPF40A-208ENST00000472760 PTPRZ1P23471 2315 aaPredicted RBP0.05□□□□□ -2.4
PRPF40A-208ENST00000472760 TRGV1A0A0A0MS02 117 aa0.05□□□□□ -2.4
PRPF40A-208ENST00000472760 GCHFRP30047 84 aa0.05□□□□□ -2.4
PRPF40A-208ENST00000472760 EDDM3BP56851 147 aa0.05□□□□□ -2.4
PRPF40A-208ENST00000472760 TSTD1Q8NFU3 115 aa0.05□□□□□ -2.4
PRPF40A-208ENST00000472760 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
PRPF40A-208ENST00000472760 COPZ2Q9P299 210 aa0.05□□□□□ -2.4
PRPF40A-208ENST00000472760 F5P12259 2224 aa0.04□□□□□ -2.4
PRPF40A-208ENST00000472760 IFNA17P01571 189 aa0.04□□□□□ -2.4
PRPF40A-208ENST00000472760 IL5P05113 134 aa0.04□□□□□ -2.4
PRPF40A-208ENST00000472760 PIPP12273 146 aaPredicted RBP0.04□□□□□ -2.4
PRPF40A-208ENST00000472760 RRAS2P62070 204 aaPredicted RBP0.04□□□□□ -2.4
PRPF40A-208ENST00000472760 MAFIPQ8WZ33 124 aa0.04□□□□□ -2.4
PRPF40A-208ENST00000472760 FHAD1B1AJZ9 1412 aa0.04□□□□□ -2.4
PRPF40A-208ENST00000472760 MED13LQ71F56 2210 aa0.03□□□□□ -2.4
PRPF40A-208ENST00000472760 PITX3O75364 302 aa0.03□□□□□ -2.4
PRPF40A-208ENST00000472760 UBE2G1P62253 170 aa0.03□□□□□ -2.4
PRPF40A-208ENST00000472760 INSL4Q14641 139 aa0.03□□□□□ -2.4
PRPF40A-208ENST00000472760 NRXN2Q9P2S2 1712 aa0.03□□□□□ -2.4
PRPF40A-208ENST00000472760 TMEM2Q9UHN6 1383 aa0.03□□□□□ -2.4
PRPF40A-208ENST00000472760 SYNE2Q8WXH0 6885 aaKnown RBP0.03□□□□□ -2.41
PRPF40A-208ENST00000472760 NPFFO15130 113 aa0.02□□□□□ -2.41
PRPF40A-208ENST00000472760 UBE2D1P51668 147 aa0.02□□□□□ -2.41
PRPF40A-208ENST00000472760 SCIMPQ6UWF3 145 aa0.02□□□□□ -2.41
PRPF40A-208ENST00000472760 IBTKQ9P2D0 1353 aaPredicted RBP0.02□□□□□ -2.41
PRPF40A-208ENST00000472760 DAPK1P53355 1430 aa0.02□□□□□ -2.41
PRPF40A-208ENST00000472760 ADGRB1O14514 1584 aa0.02□□□□□ -2.41
PRPF40A-208ENST00000472760 PLXNA1Q9UIW2 1896 aa0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 ALX1Q15699 326 aa0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 SMIM21Q3B7S5 101 aa0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 ANP32BQ92688 251 aaKnown RBP0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 SPTSSAQ969W0 71 aa0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 U3KQA8 63 aa0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 ANK2Q01484 3957 aa0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 PHIPQ8WWQ0 1821 aa0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 CDK5RAP2Q96SN8 1893 aa0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 POLQO75417 2590 aa0□□□□□ -2.41
PRPF40A-208ENST00000472760 SNCGO76070 127 aa0□□□□□ -2.41
PRPF40A-208ENST00000472760 TPT1P8Q9HAU6 139 aa0□□□□□ -2.41
PRPF40A-208ENST00000472760 UNC13AQ9UPW8 1703 aa0□□□□□ -2.41
PRPF40A-208ENST00000472760 NCOR2Q9Y618 2525 aa-0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 UBE2DNLQ8IWF7 75 aa-0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 SPTSSBQ8NFR3 76 aa-0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 MUC22E2RYF6 1773 aaPredicted RBP-0.01□□□□□ -2.41
PRPF40A-208ENST00000472760 MYO7AQ13402 2215 aa-0.02□□□□□ -2.41
PRPF40A-208ENST00000472760 APOC4-APOC2K7ER74 178 aa-0.02□□□□□ -2.41
PRPF40A-208ENST00000472760 CBLN1P23435 193 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms