RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 HHLA3Q9XRX5 114 aa4.72□□□□□ -1.65
CHD6-206ENST00000470470 PHLDA3Q9Y5J5 127 aa4.72□□□□□ -1.65
CHD6-206ENST00000470470 SPTAN1Q13813 2472 aaKnown RBP4.71□□□□□ -1.65
CHD6-206ENST00000470470 C7orf71A4D174 169 aa4.71□□□□□ -1.66
CHD6-206ENST00000470470 SNRPD3P62318 126 aaKnown RBP4.71□□□□□ -1.66
CHD6-206ENST00000470470 SEC11AP67812 179 aa4.71□□□□□ -1.66
CHD6-206ENST00000470470 MPV17L2Q567V2 206 aa4.71□□□□□ -1.66
CHD6-206ENST00000470470 TMEM97Q5BJF2 176 aa4.71□□□□□ -1.66
CHD6-206ENST00000470470 FAM159AQ6UWV7 190 aa4.71□□□□□ -1.66
CHD6-206ENST00000470470 RASL10AQ92737 203 aa4.71□□□□□ -1.66
CHD6-206ENST00000470470 C9orf85Q96MD7 179 aa4.71□□□□□ -1.66
CHD6-206ENST00000470470 AP1S3Q96PC3 154 aa4.71□□□□□ -1.66
CHD6-206ENST00000470470 A0A087WX48 190 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 TRBV6-5A0A0K0K1A5 114 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 F6UB75 175 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 TAX1BP3O14907 124 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 GNRH2O43555 120 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 DPM2O94777 84 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 IGKCP01834 107 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 PRB1P04280 392 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 PRSS1P07477 247 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 UBE2V1Q13404 147 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 SUMO4Q6EEV6 95 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 PTH2Q96A98 100 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 TOMM6Q96B49 74 aa4.7□□□□□ -1.66
CHD6-206ENST00000470470 TIMM8BQ9Y5J9 83 aaPredicted RBP4.7□□□□□ -1.66
CHD6-206ENST00000470470 IGSF10Q6WRI0 2623 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 CHD6Q8TD26 2715 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 IGHV3-16A0A0C4DH30 117 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 LINC01619G3V211 115 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 H0Y8G0 127 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.69□□□□□ -1.66
CHD6-206ENST00000470470 H7C1H1 209 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 EDN2P20800 178 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 PLNP26678 52 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 POLR2KP53803 58 aaKnown RBP4.69□□□□□ -1.66
CHD6-206ENST00000470470 FXYD7P58549 80 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 DEFB1P60022 68 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 HSD52Q0P140 79 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 PIK3CD-AS1Q5SR53 167 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 C10orf99Q6UWK7 81 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 AMTNQ6UX39 209 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 ADAMTSL5Q6ZMM2 481 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 FOXI2Q6ZQN5 318 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 C14orf178Q8N769 122 aaPredicted RBP4.69□□□□□ -1.66
CHD6-206ENST00000470470 EDA2RQ9HAV5 297 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 CSPG4Q6UVK1 2322 aa4.69□□□□□ -1.66
CHD6-206ENST00000470470 USP24Q9UPU5 2620 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 ZFYVE26Q68DK2 2539 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 TRAV26-2A0A0B4J265 109 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 F8VRH5 84 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 H3BRM9 83 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 VCYO14598 125 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 SPRY2O43597 315 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 SRD5A1P18405 259 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 HOXD3P31249 432 aaPredicted RBP4.68□□□□□ -1.66
CHD6-206ENST00000470470 CDKN1BP46527 198 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 SYNJ2BPP57105 145 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 TAL2Q16559 108 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 Q5PR19 223 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 ERASQ7Z444 233 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 NEXN-AS1Q8NBZ9 246 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 C18orf15Q96N68 181 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 FOXC2Q99958 501 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 LINC00467Q9BRT7 94 aa4.68□□□□□ -1.66
CHD6-206ENST00000470470 ZNF256Q9Y2P7 627 aaPredicted RBP4.68□□□□□ -1.66
CHD6-206ENST00000470470 USP9XQ93008 2570 aaPredicted RBP4.67□□□□□ -1.66
CHD6-206ENST00000470470 SPG11Q96JI7 2443 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 CFAP46Q8IYW2 2715 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 IGKV3-7A0A075B6H7 116 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 IGHV1OR15-1A0A075B7D0 117 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 TRAV12-3A0A0B4J271 114 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 TRBV27A0A0K0K1C4 114 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 A6NDN8 102 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 CBY3A6NI87 242 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 CD7P09564 240 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 ZNF688P0C7X2 276 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 RIPPLY3P57055 190 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 TCTEX1D4Q5JR98 221 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 PAPPA-AS1Q5QFB9 102 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 NTN5Q8WTR8 489 aaPredicted RBP4.67□□□□□ -1.66
CHD6-206ENST00000470470 C4orf3Q8WVX3 66 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 RPL39LQ96EH5 51 aaKnown RBP4.67□□□□□ -1.66
CHD6-206ENST00000470470 SCGB3A1Q96QR1 104 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 MRPL35Q9NZE8 188 aaKnown RBP4.67□□□□□ -1.66
CHD6-206ENST00000470470 PEMTQ9UBM1 199 aa4.67□□□□□ -1.66
CHD6-206ENST00000470470 TRAV25A0A0B4J276 109 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 IGIPA6NJ69 53 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 CCL25O15444 150 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 CRYGDP07320 174 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 RHOHQ15669 191 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 ZC2HC1BQ5TFG8 222 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 C2orf66Q6UXQ4 117 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 PCP2Q8IVA1 136 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 MAPK1IP1LQ8NDC0 245 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 TMEM141Q96I45 108 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 SPAG8Q99932 426 aaPredicted RBP4.66□□□□□ -1.66
CHD6-206ENST00000470470 TM2D2Q9BX73 214 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 CSTL1Q9H114 145 aa4.66□□□□□ -1.66
CHD6-206ENST00000470470 KMT2BQ9UMN6 2715 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms