RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 AP3S2P59780 193 aa6.26□□□□□ -1.41
HDAC3-203ENST00000467533 FAM74A1Q5RGS3 127 aa6.26□□□□□ -1.41
HDAC3-203ENST00000467533 V9GYH0 126 aa6.26□□□□□ -1.41
HDAC3-203ENST00000467533 TRBV10-1A0A0K0K1A3 114 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 S100A11P31949 105 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 RPS10P46783 165 aaKnown RBP6.25□□□□□ -1.41
HDAC3-203ENST00000467533 RBX1P62877 108 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 HBG1P69891 147 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 HBG2P69892 147 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 REG3AQ06141 175 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 GAGE6Q13070 117 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 ZFP69Q49AA0 526 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 TOMM5Q8N4H5 51 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 SGK494Q96LW2 274 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 OTORQ9NRC9 128 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 OR5AC2Q9NZP5 309 aa6.25□□□□□ -1.41
HDAC3-203ENST00000467533 SULT1A1P50225 295 aa6.24□□□□□ -1.41
HDAC3-203ENST00000467533 RAB5CP51148 216 aa6.24□□□□□ -1.41
HDAC3-203ENST00000467533 GNG5P63218 68 aa6.24□□□□□ -1.41
HDAC3-203ENST00000467533 PYDC2Q56P42 97 aa6.24□□□□□ -1.41
HDAC3-203ENST00000467533 STX12Q86Y82 276 aa6.24□□□□□ -1.41
HDAC3-203ENST00000467533 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-203ENST00000467533 CCDC32Q9BV29 185 aa6.24□□□□□ -1.41
HDAC3-203ENST00000467533 H3BVH4 76 aa6.23□□□□□ -1.41
HDAC3-203ENST00000467533 HIGD2BQ4VC39 106 aa6.23□□□□□ -1.41
HDAC3-203ENST00000467533 KHDC3LQ587J8 217 aa6.23□□□□□ -1.41
HDAC3-203ENST00000467533 THAP6Q8TBB0 222 aa6.23□□□□□ -1.41
HDAC3-203ENST00000467533 TRIM63Q969Q1 353 aa6.23□□□□□ -1.41
HDAC3-203ENST00000467533 SDHCQ99643 169 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-203ENST00000467533 LINC00474Q9P2X8 69 aa6.23□□□□□ -1.41
HDAC3-203ENST00000467533 TRAV8-4A0A0B4J246 113 aa6.22□□□□□ -1.41
HDAC3-203ENST00000467533 IGSF23A1L1A6 192 aa6.22□□□□□ -1.41
HDAC3-203ENST00000467533 P01737 135 aa6.22□□□□□ -1.41
HDAC3-203ENST00000467533 GZMBP10144 247 aa6.22□□□□□ -1.41
HDAC3-203ENST00000467533 PVALBP20472 110 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-203ENST00000467533 ATP6V1FQ16864 119 aa6.22□□□□□ -1.41
HDAC3-203ENST00000467533 SMUG1Q53HV7 270 aa6.22□□□□□ -1.41
HDAC3-203ENST00000467533 C15orf56Q8N910 161 aa6.22□□□□□ -1.41
HDAC3-203ENST00000467533 INO80EQ8NBZ0 244 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-203ENST00000467533 OR11H4Q8NGC9 324 aa6.22□□□□□ -1.41
HDAC3-203ENST00000467533 KCNIP2Q9NS61 270 aa6.22□□□□□ -1.41
HDAC3-203ENST00000467533 IL7P13232 177 aa6.21□□□□□ -1.42
HDAC3-203ENST00000467533 TRIQKQ629K1 86 aa6.21□□□□□ -1.42
HDAC3-203ENST00000467533 OR10G8Q8NGN5 311 aa6.21□□□□□ -1.42
HDAC3-203ENST00000467533 DEDD2Q8WXF8 326 aa6.21□□□□□ -1.42
HDAC3-203ENST00000467533 IL36BQ9NZH7 164 aa6.21□□□□□ -1.42
HDAC3-203ENST00000467533 MBD2Q9UBB5 411 aa6.21□□□□□ -1.42
HDAC3-203ENST00000467533 IGKV3D-20A0A0C4DH25 116 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 FAM25EA8MYX2 175 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 UPK1BO75841 260 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 MT-ND6P03923 174 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 TAS2R45P59539 299 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 TMEM97Q5BJF2 176 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 CFAP161Q6P656 301 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 TMEM252Q8N6L7 170 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 ARL6IP6Q8N6S5 226 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 FER1L6-AS1Q8NA97 138 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 NEXN-AS1Q8NBZ9 246 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 SFRP2Q96HF1 295 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 GFRA4Q9GZZ7 299 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 C11orf1Q9H5F2 150 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 FLVCR2Q9UPI3 526 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 PKIGQ9Y2B9 76 aa6.2□□□□□ -1.42
HDAC3-203ENST00000467533 IGLV1-50A0A075B6I6 118 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 TRBV25-1A0A075B6N4 114 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 SERTM2A0A1B0GWG4 89 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 M0R381 172 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 EIF3GO75821 320 aaKnown RBP eCLIP6.19□□□□□ -1.42
HDAC3-203ENST00000467533 UBE2D1P51668 147 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 ZNF56Q15929 161 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 C1orf137Q5JT78 98 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 NTM-AS1Q6ZSK4 140 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 MITD1Q8WV92 249 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 DIRC1Q969H9 104 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 PSG8Q9UQ74 426 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 PHLDA3Q9Y5J5 127 aa6.19□□□□□ -1.42
HDAC3-203ENST00000467533 TRAV1-1A0A0B4J248 108 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 CENPXA8MT69 81 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 B4DEV8 164 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 C17orf112F2Z3M2 114 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 K7EQM0 130 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 ARMS2P0C7Q2 107 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 RAB2AP61019 212 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 IFITM3Q01628 133 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 PRNTQ86SH4 94 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 C20orf203Q8NBC4 194 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 SUN5Q8TC36 379 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 DERL1Q9BUN8 251 aa6.18□□□□□ -1.42
HDAC3-203ENST00000467533 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
HDAC3-203ENST00000467533 NAP1L6A6NFF2 107 aa6.17□□□□□ -1.42
HDAC3-203ENST00000467533 PLA2G10O15496 165 aa6.17□□□□□ -1.42
HDAC3-203ENST00000467533 NDUFB6O95139 128 aa6.17□□□□□ -1.42
HDAC3-203ENST00000467533 TPT1P13693 172 aaKnown RBP6.17□□□□□ -1.42
HDAC3-203ENST00000467533 DEFA1P59665 94 aa6.17□□□□□ -1.42
HDAC3-203ENST00000467533 DEFA3P59666 94 aa6.17□□□□□ -1.42
HDAC3-203ENST00000467533 FLI1Q01543 452 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-203ENST00000467533 GRIFINA4D1Z8 144 aa6.16□□□□□ -1.42
HDAC3-203ENST00000467533 LYRM1O43325 122 aa6.16□□□□□ -1.42
HDAC3-203ENST00000467533 TCRAP04437 139 aa6.16□□□□□ -1.42
HDAC3-203ENST00000467533 SULT1A2P50226 295 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms