RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 FAM223AQ8IWN6 122 aa8.79□□□□□ -1
PDZRN3-203ENST00000462146 OPRPNQ99935 248 aaPredicted RBP8.79□□□□□ -1
PDZRN3-203ENST00000462146 TMEM170BQ5T4T1 132 aa8.79□□□□□ -1
PDZRN3-203ENST00000462146 CARD19Q96LW7 228 aa8.79□□□□□ -1
PDZRN3-203ENST00000462146 NDUFA4O00483 81 aa8.78□□□□□ -1
PDZRN3-203ENST00000462146 CFC1BP0CG36 223 aa8.78□□□□□ -1
PDZRN3-203ENST00000462146 CFC1P0CG37 223 aa8.78□□□□□ -1
PDZRN3-203ENST00000462146 F5H697 171 aa8.78□□□□□ -1
PDZRN3-203ENST00000462146 MT-ATP8P03928 68 aa8.78□□□□□ -1
PDZRN3-203ENST00000462146 POLR2KP53803 58 aaKnown RBP8.78□□□□□ -1
PDZRN3-203ENST00000462146 CKS1BP61024 79 aa8.78□□□□□ -1
PDZRN3-203ENST00000462146 FAM74A4Q5TZK3 123 aa8.78□□□□□ -1
PDZRN3-203ENST00000462146 A0A1B0GV72 72 aa8.77□□□□□ -1
PDZRN3-203ENST00000462146 IGHV3-30P01768 117 aa8.77□□□□□ -1
PDZRN3-203ENST00000462146 IGHV3-30-5P0DP03 117 aa8.77□□□□□ -1
PDZRN3-203ENST00000462146 PMVKQ15126 192 aa8.77□□□□□ -1
PDZRN3-203ENST00000462146 POM121L12Q8N7R1 296 aa8.77□□□□□ -1
PDZRN3-203ENST00000462146 RHPN1-AS1Q9BWJ2 59 aa8.77□□□□□ -1
PDZRN3-203ENST00000462146 MED14OSP0DP75 135 aa8.77□□□□□ -1.01
PDZRN3-203ENST00000462146 APRG1Q8IVJ8 170 aa8.77□□□□□ -1.01
PDZRN3-203ENST00000462146 CLUHP3Q96NS8 147 aa8.77□□□□□ -1.01
PDZRN3-203ENST00000462146 TRAV12-3A0A0B4J271 114 aa8.77□□□□□ -1.01
PDZRN3-203ENST00000462146 SDHAF1A6NFY7 115 aa8.77□□□□□ -1.01
PDZRN3-203ENST00000462146 NXPH4O95158 308 aa8.77□□□□□ -1.01
PDZRN3-203ENST00000462146 AMELXQ99217 191 aa8.77□□□□□ -1.01
PDZRN3-203ENST00000462146 ZNF256Q9Y2P7 627 aaPredicted RBP8.77□□□□□ -1.01
PDZRN3-203ENST00000462146 IGHV3-64A0A075B6Q5 118 aa8.76□□□□□ -1.01
PDZRN3-203ENST00000462146 EIF4EBP3O60516 100 aaPredicted RBP8.76□□□□□ -1.01
PDZRN3-203ENST00000462146 PF4V1P10720 104 aa8.76□□□□□ -1.01
PDZRN3-203ENST00000462146 XGP55808 180 aa8.76□□□□□ -1.01
PDZRN3-203ENST00000462146 HERVK_113P61574 105 aa8.76□□□□□ -1.01
PDZRN3-203ENST00000462146 ATP6V0E2Q8NHE4 81 aa8.76□□□□□ -1.01
PDZRN3-203ENST00000462146 KIR2DL4Q99706 377 aa8.76□□□□□ -1.01
PDZRN3-203ENST00000462146 IGHV4OR15-8A0A075B7B6 117 aa8.75□□□□□ -1.01
PDZRN3-203ENST00000462146 A0A087WW49 117 aa8.75□□□□□ -1.01
PDZRN3-203ENST00000462146 IGHV1-69DA0A0B4J2H0 117 aa8.75□□□□□ -1.01
PDZRN3-203ENST00000462146 BLCAPP62952 87 aa8.75□□□□□ -1.01
PDZRN3-203ENST00000462146 Q5PR19 223 aa8.75□□□□□ -1.01
PDZRN3-203ENST00000462146 FAM159AQ6UWV7 190 aa8.75□□□□□ -1.01
PDZRN3-203ENST00000462146 SORL1Q92673 2214 aa8.75□□□□□ -1.01
PDZRN3-203ENST00000462146 KLLNB2CW77 178 aa8.75□□□□□ -1.01
PDZRN3-203ENST00000462146 IGKV3-20P01619 116 aa8.75□□□□□ -1.01
PDZRN3-203ENST00000462146 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
PDZRN3-203ENST00000462146 TRAV12-2A0A075B6T6 113 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 PPP1R17O96001 155 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 SLC25A29Q8N8R3 303 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 RAX2Q96IS3 184 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 ZNF580Q9UK33 172 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 IGHV4-38-2P0DP08 117 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 CRIP2P52943 208 aaPredicted RBP8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 ZNF876PQ49A33 203 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 TCTEX1D4Q5JR98 221 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 CELSR2Q9HCU4 2923 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 J3QQQ9 107 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 VCYO14598 125 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 Q6ZUT4 128 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 TEN1Q86WV5 123 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 C10orf126Q8N4M7 172 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 ANKRD29Q8N6D5 301 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 MDFICQ9P1T7 246 aa8.74□□□□□ -1.01
PDZRN3-203ENST00000462146 H7C2G1 150 aa8.73□□□□□ -1.01
PDZRN3-203ENST00000462146 IGHV1-69P01742 117 aa8.73□□□□□ -1.01
PDZRN3-203ENST00000462146 CRYBA4P53673 196 aa8.73□□□□□ -1.01
PDZRN3-203ENST00000462146 KLRB1Q12918 225 aa8.73□□□□□ -1.01
PDZRN3-203ENST00000462146 TIMM17AQ99595 171 aa8.73□□□□□ -1.01
PDZRN3-203ENST00000462146 CSMD2Q7Z408 3487 aa8.73□□□□□ -1.01
PDZRN3-203ENST00000462146 H3BUX3 64 aa8.73□□□□□ -1.01
PDZRN3-203ENST00000462146 TRPT1Q86TN4 253 aaKnown RBP8.73□□□□□ -1.01
PDZRN3-203ENST00000462146 TRAV26-1A0A087WT03 109 aa8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 A4D1N5 150 aa8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 ZNF56Q15929 161 aa8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 TMEM95Q3KNT9 176 aa8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 PAPPA-AS1Q5QFB9 102 aa8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 PPDPFLQ8WWR9 84 aa8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 TMEM141Q96I45 108 aa8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 GEMIN7Q9H840 131 aaKnown RBP8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 ACACBO00763 2458 aa8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 LGALS3P17931 250 aaKnown RBP8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 RPL32P62910 135 aaKnown RBP8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 PRO1854Q9UHT4 67 aa8.72□□□□□ -1.01
PDZRN3-203ENST00000462146 TRBV27A0A0K0K1C4 114 aa8.71□□□□□ -1.01
PDZRN3-203ENST00000462146 C19orf84I3L1E1 186 aa8.71□□□□□ -1.01
PDZRN3-203ENST00000462146 DCANP1Q8TF63 244 aa8.71□□□□□ -1.01
PDZRN3-203ENST00000462146 DAZ1Q9NQZ3 744 aaKnown RBP8.71□□□□□ -1.01
PDZRN3-203ENST00000462146 TRAV2A0A0B4J234 112 aa8.71□□□□□ -1.02
PDZRN3-203ENST00000462146 LGALS9O00182 355 aa8.71□□□□□ -1.02
PDZRN3-203ENST00000462146 ELANEP08246 267 aa8.71□□□□□ -1.02
PDZRN3-203ENST00000462146 ZNF688P0C7X2 276 aa8.71□□□□□ -1.02
PDZRN3-203ENST00000462146 P0DMU3 169 aa8.71□□□□□ -1.02
PDZRN3-203ENST00000462146 FAM231AP0DMU4 169 aa8.71□□□□□ -1.02
PDZRN3-203ENST00000462146 FAM231CP0DMU5 169 aa8.71□□□□□ -1.02
PDZRN3-203ENST00000462146 PRORYQ9H606 182 aa8.71□□□□□ -1.02
PDZRN3-203ENST00000462146 A8MWV9 139 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 IGHV4-39P01824 125 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 IGHG2P01859 326 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 SBSPONQ8IVN8 264 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 USMG5Q96IX5 58 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 DOPEY2Q9Y3R5 2298 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms