RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 IGLV4-69A0A075B6H9 119 aa9.27□□□□□ -0.93
ECHDC1-209ENST00000454591 TRGV11A0A075B6L2 103 aa9.27□□□□□ -0.93
ECHDC1-209ENST00000454591 M0QY20 66 aa9.27□□□□□ -0.93
ECHDC1-209ENST00000454591 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
ECHDC1-209ENST00000454591 PKD1L2Q7Z442 2459 aa9.27□□□□□ -0.93
ECHDC1-209ENST00000454591 ASH1LQ9NR48 2969 aaKnown RBP9.27□□□□□ -0.93
ECHDC1-209ENST00000454591 CHD8Q9HCK8 2581 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 C11orf86A6NJI1 115 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 IGLL5B9A064 214 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 TGFAP01135 160 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 IGHV4-31P0DP07 118 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 C12orf74Q32Q52 190 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 MORN3Q6PF18 240 aaPredicted RBP9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 TRPT1Q86TN4 253 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 Q8N1Y9 231 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 PRADC1Q9BSG0 188 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 JPT2Q9H910 190 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 BEX4Q9NWD9 120 aaPredicted RBP9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 NHP2Q9NX24 153 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 TP53TG1Q9Y2A0 90 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 SPTAN1Q13813 2472 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 PRRC2AP48634 2157 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 HOXD3P31249 432 aaPredicted RBP9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 SYNJ2BPP57105 145 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 HERVK_113P61574 105 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 ZNF876PQ49A33 203 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 Q5PR19 223 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 NFE4Q86UQ8 179 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 SPAG8Q99932 426 aaPredicted RBP9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 LINC00467Q9BRT7 94 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 MDFICQ9P1T7 246 aa9.26□□□□□ -0.93
ECHDC1-209ENST00000454591 EPG5Q9HCE0 2579 aa9.25□□□□□ -0.93
ECHDC1-209ENST00000454591 CR1P17927 2039 aa9.25□□□□□ -0.93
ECHDC1-209ENST00000454591 NRGNQ92686 78 aa9.25□□□□□ -0.93
ECHDC1-209ENST00000454591 HIST1H4GQ99525 98 aa9.25□□□□□ -0.93
ECHDC1-209ENST00000454591 CSMD1Q96PZ7 3565 aa9.24□□□□□ -0.93
ECHDC1-209ENST00000454591 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
ECHDC1-209ENST00000454591 A0A087WWL8 130 aa9.23□□□□□ -0.93
ECHDC1-209ENST00000454591 TMEM238LA0A1B0GVL6 79 aa9.23□□□□□ -0.93
ECHDC1-209ENST00000454591 A6NJY4 79 aa9.23□□□□□ -0.93
ECHDC1-209ENST00000454591 G3V4G9 280 aa9.23□□□□□ -0.93
ECHDC1-209ENST00000454591 CRYBA4P53673 196 aa9.23□□□□□ -0.93
ECHDC1-209ENST00000454591 RRN3P1Q2M238 152 aa9.23□□□□□ -0.93
ECHDC1-209ENST00000454591 WFDC12Q8WWY7 111 aa9.23□□□□□ -0.93
ECHDC1-209ENST00000454591 CLUHP3Q96NS8 147 aa9.23□□□□□ -0.93
ECHDC1-209ENST00000454591 NAA38Q9BRA0 125 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-209ENST00000454591 ZNF815PA8K554 130 aa9.22□□□□□ -0.93
ECHDC1-209ENST00000454591 F5H697 171 aa9.22□□□□□ -0.93
ECHDC1-209ENST00000454591 K7ERJ3 54 aa9.22□□□□□ -0.93
ECHDC1-209ENST00000454591 PCP4P48539 62 aa9.22□□□□□ -0.93
ECHDC1-209ENST00000454591 UBE2D1P51668 147 aa9.22□□□□□ -0.93
ECHDC1-209ENST00000454591 SPINK13Q1W4C9 94 aa9.22□□□□□ -0.93
ECHDC1-209ENST00000454591 TCTEX1D4Q5JR98 221 aa9.22□□□□□ -0.93
ECHDC1-209ENST00000454591 ZNF479Q96JC4 524 aa9.22□□□□□ -0.93
ECHDC1-209ENST00000454591 AGRNO00468 2067 aa9.22□□□□□ -0.93
ECHDC1-209ENST00000454591 TRAV12-2A0A075B6T6 113 aa9.21□□□□□ -0.93
ECHDC1-209ENST00000454591 F8W1H4 67 aa9.21□□□□□ -0.93
ECHDC1-209ENST00000454591 I3L3M4 83 aa9.21□□□□□ -0.93
ECHDC1-209ENST00000454591 TMEM86BQ8N661 226 aa9.21□□□□□ -0.93
ECHDC1-209ENST00000454591 C20orf203Q8NBC4 194 aa9.21□□□□□ -0.93
ECHDC1-209ENST00000454591 PYGO1Q9Y3Y4 419 aa9.21□□□□□ -0.93
ECHDC1-209ENST00000454591 KMT2BQ9UMN6 2715 aaPredicted RBP9.21□□□□□ -0.93
ECHDC1-209ENST00000454591 H3BMM0 161 aa9.21□□□□□ -0.94
ECHDC1-209ENST00000454591 P0DMU3 169 aa9.21□□□□□ -0.94
ECHDC1-209ENST00000454591 FAM231AP0DMU4 169 aa9.21□□□□□ -0.94
ECHDC1-209ENST00000454591 FAM231CP0DMU5 169 aa9.21□□□□□ -0.94
ECHDC1-209ENST00000454591 RPL39P62891 51 aaKnown RBP9.21□□□□□ -0.94
ECHDC1-209ENST00000454591 ZNF56Q15929 161 aa9.21□□□□□ -0.94
ECHDC1-209ENST00000454591 C4orf3Q8WVX3 66 aa9.21□□□□□ -0.94
ECHDC1-209ENST00000454591 DLX4Q92988 240 aaPredicted RBP9.21□□□□□ -0.94
ECHDC1-209ENST00000454591 PEMTQ9UBM1 199 aa9.21□□□□□ -0.94
ECHDC1-209ENST00000454591 SELENOKQ9Y6D0 94 aa9.21□□□□□ -0.94
ECHDC1-209ENST00000454591 A0A0J9YY99 117 aa9.2□□□□□ -0.94
ECHDC1-209ENST00000454591 HOXA3O43365 443 aaPredicted RBP9.2□□□□□ -0.94
ECHDC1-209ENST00000454591 DEFB113Q30KQ7 82 aa9.2□□□□□ -0.94
ECHDC1-209ENST00000454591 AMELXQ99217 191 aa9.2□□□□□ -0.94
ECHDC1-209ENST00000454591 ACACBO00763 2458 aa9.19□□□□□ -0.94
ECHDC1-209ENST00000454591 SAP30O75446 220 aa9.19□□□□□ -0.94
ECHDC1-209ENST00000454591 RBMY1A1P0DJD3 496 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-209ENST00000454591 RBMY1CP0DJD4 496 aa9.19□□□□□ -0.94
ECHDC1-209ENST00000454591 RBMY1FQ15415 496 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-209ENST00000454591 RNF151Q2KHN1 245 aa9.19□□□□□ -0.94
ECHDC1-209ENST00000454591 ZNRF2Q8NHG8 242 aa9.19□□□□□ -0.94
ECHDC1-209ENST00000454591 VPS25Q9BRG1 176 aa9.19□□□□□ -0.94
ECHDC1-209ENST00000454591 CFAP46Q8IYW2 2715 aa9.19□□□□□ -0.94
ECHDC1-209ENST00000454591 A8MWV9 139 aa9.18□□□□□ -0.94
ECHDC1-209ENST00000454591 LEPROTO15243 131 aa9.18□□□□□ -0.94
ECHDC1-209ENST00000454591 SCGB2A2Q13296 93 aa9.18□□□□□ -0.94
ECHDC1-209ENST00000454591 CD300EQ496F6 205 aaPredicted RBP9.18□□□□□ -0.94
ECHDC1-209ENST00000454591 FAM74A4Q5TZK3 123 aa9.18□□□□□ -0.94
ECHDC1-209ENST00000454591 TEX29Q8N6K0 151 aa9.18□□□□□ -0.94
ECHDC1-209ENST00000454591 SLC25A29Q8N8R3 303 aa9.18□□□□□ -0.94
ECHDC1-209ENST00000454591 PLEKHB2Q96CS7 222 aa9.18□□□□□ -0.94
ECHDC1-209ENST00000454591 TMEM223A0PJW6 202 aa9.17□□□□□ -0.94
ECHDC1-209ENST00000454591 M0R2P5 195 aa9.17□□□□□ -0.94
ECHDC1-209ENST00000454591 IGKV3-20P01619 116 aa9.17□□□□□ -0.94
ECHDC1-209ENST00000454591 USP9XQ93008 2570 aaPredicted RBP9.17□□□□□ -0.94
ECHDC1-209ENST00000454591 IGLV4-3A0A075B6K6 122 aa9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 RBMY1BA6NDE4 496 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms