RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 IGKCP01834 107 aa1.94□□□□□ -2.1
HMGB1P26-201ENST00000452520 PRB4P10163 310 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P26-201ENST00000452520 MEIG1Q5JSS6 88 aa1.94□□□□□ -2.1
HMGB1P26-201ENST00000452520 LYPD5Q6UWN5 251 aa1.94□□□□□ -2.1
HMGB1P26-201ENST00000452520 LINC00299Q6ZSB3 139 aa1.94□□□□□ -2.1
HMGB1P26-201ENST00000452520 DYNLRB2Q8TF09 96 aa1.94□□□□□ -2.1
HMGB1P26-201ENST00000452520 CGREF1Q99674 301 aa1.94□□□□□ -2.1
HMGB1P26-201ENST00000452520 NKTRP30414 1462 aaKnown RBP1.94□□□□□ -2.1
HMGB1P26-201ENST00000452520 TET3O43151 1660 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 ABCC3O15438 1527 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 MROH1Q8NDA8 1641 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 TRAV12-2A0A075B6T6 113 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 TRAV17A0A0B4J275 112 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 LINC01545Q5VT33 79 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 UBR1Q8IWV7 1749 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 A0A0C4DFX4 3053 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 PLEKHH2Q8IVE3 1493 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 ALPK3Q96L96 1907 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 UNC13BO14795 1591 aa1.93□□□□□ -2.1
HMGB1P26-201ENST00000452520 SLIT1O75093 1534 aa1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 EFCAB6Q5THR3 1501 aa1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 PIK3C2BO00750 1634 aa1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 IGKV2-40A0A087WW87 121 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 IGKV2D-40P01614 121 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 HIST1H1DP16402 221 aaKnown RBP1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 POLR2JP52435 117 aaKnown RBP1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 IQCJQ1A5X6 159 aa1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 VSTM2AQ8TAG5 236 aa1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 MRPL36Q9P0J6 103 aaKnown RBP1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 MYOM2P54296 1465 aa1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 TRPM7Q96QT4 1865 aa1.92□□□□□ -2.1
HMGB1P26-201ENST00000452520 RGPD1P0DJD0 1748 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 TNRC6BQ9UPQ9 1833 aaKnown RBP1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 MED13Q9UHV7 2174 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 EML5Q05BV3 1969 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 PRXQ9BXM0 1461 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 IGHV3-30P01768 117 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 TFF1P04155 84 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 APODP05090 189 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 GYPBP06028 91 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 IGHV3-30-5P0DP03 117 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 PDE6GP18545 87 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 OCIAD2Q56VL3 154 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 UNQ5815/PRO19632Q6UWF5 114 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 TMEM203Q969S6 136 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 LINC00526Q96FQ7 95 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 PDCD10Q9BUL8 212 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 SEC11CQ9BY50 192 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 KCPQ6ZWJ8 1503 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 ERBINQ96RT1 1412 aa1.91□□□□□ -2.1
HMGB1P26-201ENST00000452520 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
HMGB1P26-201ENST00000452520 CASP8AP2Q9UKL3 1982 aa1.9□□□□□ -2.1
HMGB1P26-201ENST00000452520 TNRC18O15417 2968 aaPredicted RBP1.9□□□□□ -2.1
HMGB1P26-201ENST00000452520 SIP14410 1827 aa1.9□□□□□ -2.11
HMGB1P26-201ENST00000452520 TRAV2A0A0B4J234 112 aa1.9□□□□□ -2.11
HMGB1P26-201ENST00000452520 NUPR2A6NF83 97 aa1.9□□□□□ -2.11
HMGB1P26-201ENST00000452520 IFNGP01579 166 aa1.9□□□□□ -2.11
HMGB1P26-201ENST00000452520 PPDPFLQ8WWR9 84 aa1.9□□□□□ -2.11
HMGB1P26-201ENST00000452520 SNRNP25Q9BV90 132 aaKnown RBP1.9□□□□□ -2.11
HMGB1P26-201ENST00000452520 SCN3BQ9NY72 215 aa1.9□□□□□ -2.11
HMGB1P26-201ENST00000452520 NUP188Q5SRE5 1749 aa1.9□□□□□ -2.11
HMGB1P26-201ENST00000452520 CCDC18Q5T9S5 1454 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 CCDC179H3BU77 68 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 PIRTP0C851 137 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 SLC25A6P12236 298 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 IL9P15248 144 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 FGF7P21781 194 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 SPATA45Q537H7 98 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 DEFB119Q8N690 84 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 AGPAT4-IT1Q9H0P7 198 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 GNG8Q9UK08 70 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 BOKQ9UMX3 212 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 KIAA1549LQ6ZVL6 1849 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 SORL1Q92673 2214 aa1.89□□□□□ -2.11
HMGB1P26-201ENST00000452520 PXDNQ92626 1479 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 MBD5Q9P267 1494 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 ANK1P16157 1881 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 PTPN23Q9H3S7 1636 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 CXorf51AA0A1B0GTR3 108 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 SPAARA0A1B0GVQ0 90 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 AKAIN1P0CW23 69 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 FXYD4P59646 89 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 OR2T2Q6IF00 324 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 C10orf105Q8TEF2 133 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 ATG5Q9H1Y0 275 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 TMEM242Q9NWH2 141 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 NDUFA12Q9UI09 145 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 NAIPQ13075 1403 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 MCM3APO60318 1980 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 ADGRB1O14514 1584 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 PLXNC1O60486 1568 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 TET1Q8NFU7 2136 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 CDC42BPAQ5VT25 1732 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 TNS1Q9HBL0 1735 aaKnown RBP1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 ADGRL2O95490 1459 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 CCDC141Q6ZP82 1450 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 FYCO1Q9BQS8 1478 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 TMEM131LA2VDJ0 1609 aa1.88□□□□□ -2.11
HMGB1P26-201ENST00000452520 PREX2Q70Z35 1606 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms