RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 RYR1P21817 5038 aa13.54□□□□□ -0.24
LRCH3-208ENST00000443727 TEX46H3BTG2 121 aa13.54□□□□□ -0.24
LRCH3-208ENST00000443727 RAB5CP51148 216 aa13.54□□□□□ -0.24
LRCH3-208ENST00000443727 MAPKAPK5-AS1Q8N8E1 139 aa13.54□□□□□ -0.24
LRCH3-208ENST00000443727 SFRP2Q96HF1 295 aa13.54□□□□□ -0.24
LRCH3-208ENST00000443727 Q9HAA7 133 aa13.54□□□□□ -0.24
LRCH3-208ENST00000443727 SCRT2Q9NQ03 307 aa13.54□□□□□ -0.24
LRCH3-208ENST00000443727 MANBALQ9NQG1 85 aa13.54□□□□□ -0.24
LRCH3-208ENST00000443727 FUSP35637 526 aaKnown RBP eCLIP13.53□□□□□ -0.24
LRCH3-208ENST00000443727 PRR27Q6MZM9 219 aa13.53□□□□□ -0.24
LRCH3-208ENST00000443727 CDPF1Q6NVV7 123 aa13.53□□□□□ -0.24
LRCH3-208ENST00000443727 IBA57-AS1B1ANH7 110 aa13.52□□□□□ -0.25
LRCH3-208ENST00000443727 CCL20P78556 96 aa13.52□□□□□ -0.25
LRCH3-208ENST00000443727 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
LRCH3-208ENST00000443727 A0A087WWC5 75 aa13.51□□□□□ -0.25
LRCH3-208ENST00000443727 RPL35P42766 123 aaKnown RBP13.51□□□□□ -0.25
LRCH3-208ENST00000443727 TCTE3Q8IZS6 198 aa13.51□□□□□ -0.25
LRCH3-208ENST00000443727 Q9UF83 564 aa13.51□□□□□ -0.25
LRCH3-208ENST00000443727 PCLOQ9Y6V0 5065 aa13.5□□□□□ -0.25
LRCH3-208ENST00000443727 TRAV1-1A0A0B4J248 108 aa13.5□□□□□ -0.25
LRCH3-208ENST00000443727 LINC00694P0DN24 101 aa13.5□□□□□ -0.25
LRCH3-208ENST00000443727 MLST8Q9BVC4 326 aa13.5□□□□□ -0.25
LRCH3-208ENST00000443727 HSPG2P98160 4391 aa13.5□□□□□ -0.25
LRCH3-208ENST00000443727 CXCL1P09341 107 aa13.47□□□□□ -0.25
LRCH3-208ENST00000443727 SULT1A2P50226 295 aa13.47□□□□□ -0.25
LRCH3-208ENST00000443727 SPANXN1Q5VSR9 72 aa13.47□□□□□ -0.25
LRCH3-208ENST00000443727 OR10AG1Q8NH19 301 aa13.47□□□□□ -0.25
LRCH3-208ENST00000443727 C11orf52Q96A22 123 aa13.47□□□□□ -0.25
LRCH3-208ENST00000443727 DERL1Q9BUN8 251 aa13.47□□□□□ -0.25
LRCH3-208ENST00000443727 URGCP-MRPS24S4R325 110 aa13.47□□□□□ -0.25
LRCH3-208ENST00000443727 TRBV10-1A0A0K0K1A3 114 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 IFNA1P01562 189 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 SSTP61278 116 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 RPL36AP83881 106 aaKnown RBP13.46□□□□□ -0.25
LRCH3-208ENST00000443727 LAGE3Q14657 143 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 ZNF56Q15929 161 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 CENPWQ5EE01 88 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 SLC51BQ86UW2 128 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 Q8N3U1 123 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 RPL36ALQ969Q0 106 aaKnown RBP13.46□□□□□ -0.25
LRCH3-208ENST00000443727 TM2D2Q9BX73 214 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 KRTAP4-5Q9BYR2 181 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 DNAH5Q8TE73 4624 aa13.46□□□□□ -0.25
LRCH3-208ENST00000443727 MUC21A0A0G2JKD1 596 aa13.45□□□□□ -0.26
LRCH3-208ENST00000443727 MUC21A0A140T8X8 626 aa13.45□□□□□ -0.26
LRCH3-208ENST00000443727 C1QBP02746 253 aa13.45□□□□□ -0.26
LRCH3-208ENST00000443727 TOR2AQ5JU69 321 aa13.45□□□□□ -0.26
LRCH3-208ENST00000443727 DAZAP1Q96EP5 407 aaKnown RBP13.45□□□□□ -0.26
LRCH3-208ENST00000443727 OR5AL1P0C617 328 aa13.44□□□□□ -0.26
LRCH3-208ENST00000443727 RAB4BP61018 213 aa13.44□□□□□ -0.26
LRCH3-208ENST00000443727 MEF2BQ02080 365 aaPredicted RBP13.44□□□□□ -0.26
LRCH3-208ENST00000443727 Q8N1X5 172 aa13.44□□□□□ -0.26
LRCH3-208ENST00000443727 TRBV7-3A0A075B6L6 115 aa13.43□□□□□ -0.26
LRCH3-208ENST00000443727 TRAV8-3A0A0A6YYJ7 113 aa13.43□□□□□ -0.26
LRCH3-208ENST00000443727 F5H697 171 aa13.43□□□□□ -0.26
LRCH3-208ENST00000443727 SNAI2O43623 268 aa13.43□□□□□ -0.26
LRCH3-208ENST00000443727 PDE6DO43924 150 aa13.43□□□□□ -0.26
LRCH3-208ENST00000443727 GNG4P50150 75 aa13.43□□□□□ -0.26
LRCH3-208ENST00000443727 KCNIP4Q6PIL6 250 aa13.43□□□□□ -0.26
LRCH3-208ENST00000443727 Q6ZNX1 250 aa13.43□□□□□ -0.26
LRCH3-208ENST00000443727 DAZ4Q86SG3 579 aaKnown RBP13.43□□□□□ -0.26
LRCH3-208ENST00000443727 TPPP3Q9BW30 176 aa13.43□□□□□ -0.26
LRCH3-208ENST00000443727 SSBP4Q9BWG4 385 aaPredicted RBP13.43□□□□□ -0.26
LRCH3-208ENST00000443727 DAZ3Q9NR90 486 aaKnown RBP13.43□□□□□ -0.26
LRCH3-208ENST00000443727 APOBP04114 4563 aaKnown RBP13.42□□□□□ -0.26
LRCH3-208ENST00000443727 IGLV5-52A0A0A0MRZ9 124 aa13.42□□□□□ -0.26
LRCH3-208ENST00000443727 SMIM17P0DL12 118 aa13.42□□□□□ -0.26
LRCH3-208ENST00000443727 GCSHP23434 173 aa13.42□□□□□ -0.26
LRCH3-208ENST00000443727 AKAP14Q86UN6 197 aa13.42□□□□□ -0.26
LRCH3-208ENST00000443727 MED9Q9NWA0 146 aa13.42□□□□□ -0.26
LRCH3-208ENST00000443727 hCG_2014768A0A024R1R8 64 aa13.41□□□□□ -0.26
LRCH3-208ENST00000443727 RAB19A4D1S5 217 aa13.41□□□□□ -0.26
LRCH3-208ENST00000443727 LRCOL1A6NCL2 159 aa13.41□□□□□ -0.26
LRCH3-208ENST00000443727 KRTAP10-1P60331 282 aa13.41□□□□□ -0.26
LRCH3-208ENST00000443727 UBE2D3P61077 147 aa13.41□□□□□ -0.26
LRCH3-208ENST00000443727 UBE2D2P62837 147 aa13.41□□□□□ -0.26
LRCH3-208ENST00000443727 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.41□□□□□ -0.26
LRCH3-208ENST00000443727 A0A087WX48 190 aa13.4□□□□□ -0.26
LRCH3-208ENST00000443727 BCL2P10415 239 aa13.4□□□□□ -0.26
LRCH3-208ENST00000443727 RPS20P60866 119 aaKnown RBP13.4□□□□□ -0.26
LRCH3-208ENST00000443727 NIT1Q86X76 327 aa13.4□□□□□ -0.26
LRCH3-208ENST00000443727 OR2D3Q8NGH3 330 aa13.4□□□□□ -0.26
LRCH3-208ENST00000443727 NTN5Q8WTR8 489 aaPredicted RBP13.4□□□□□ -0.26
LRCH3-208ENST00000443727 AP1S3Q96PC3 154 aa13.4□□□□□ -0.26
LRCH3-208ENST00000443727 GZMBP10144 247 aa13.39□□□□□ -0.27
LRCH3-208ENST00000443727 Q8N814 137 aa13.39□□□□□ -0.27
LRCH3-208ENST00000443727 OR10G8Q8NGN5 311 aa13.39□□□□□ -0.27
LRCH3-208ENST00000443727 SMIM12Q96EX1 92 aa13.39□□□□□ -0.27
LRCH3-208ENST00000443727 VAX2Q9UIW0 290 aa13.39□□□□□ -0.27
LRCH3-208ENST00000443727 XKRY2A2RUG3 117 aa13.38□□□□□ -0.27
LRCH3-208ENST00000443727 IGLV2-8P01709 118 aa13.38□□□□□ -0.27
LRCH3-208ENST00000443727 P01737 135 aa13.38□□□□□ -0.27
LRCH3-208ENST00000443727 FER1L6-AS1Q8NA97 138 aa13.38□□□□□ -0.27
LRCH3-208ENST00000443727 RMI2Q96E14 147 aa13.38□□□□□ -0.27
LRCH3-208ENST00000443727 BIN3Q9NQY0 253 aa13.38□□□□□ -0.27
LRCH3-208ENST00000443727 ABCA13Q86UQ4 5058 aa13.38□□□□□ -0.27
LRCH3-208ENST00000443727 TMEM262E9PQX1 116 aa13.37□□□□□ -0.27
LRCH3-208ENST00000443727 TAGLN2P37802 199 aaKnown RBP13.37□□□□□ -0.27
LRCH3-208ENST00000443727 ELOBQ15370 118 aa13.37□□□□□ -0.27
LRCH3-208ENST00000443727 NEXN-AS1Q8NBZ9 246 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms