RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 JPT2Q9H910 190 aa3.21□□□□□ -1.9
HLA-N-201ENST00000437516 MDFICQ9P1T7 246 aa3.21□□□□□ -1.9
HLA-N-201ENST00000437516 IGKV3-7A0A075B6H7 116 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 IGHV3OR16-10A0A075B7F0 116 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 A0A087WWL8 130 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 TRAV12-3A0A0B4J271 114 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 IGHV3-16A0A0C4DH30 117 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 A0A0J9YX75 114 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 M0R2P5 195 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 IGLV1-40P01703 118 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 IGHV3-11P01762 117 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 IGHV3-33P01772 117 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 SPINK8P0C7L1 97 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 P0DMU3 169 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 FAM231AP0DMU4 169 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 FAM231CP0DMU5 169 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 ZNF22P17026 224 aaPredicted RBP3.2□□□□□ -1.9
HLA-N-201ENST00000437516 EMP1P54849 157 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 RPL39P62891 51 aaKnown RBP3.2□□□□□ -1.9
HLA-N-201ENST00000437516 LY6EQ16553 131 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 Q6ZUT4 128 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 MUSTN1Q8IVN3 82 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 RNF152Q8N8N0 203 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 ZNRF2Q8NHG8 242 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 DCANP1Q8TF63 244 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 TMEM263Q8WUH6 116 aaKnown RBP3.2□□□□□ -1.9
HLA-N-201ENST00000437516 AMELXQ99217 191 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 GEMIN7Q9H840 131 aaKnown RBP3.2□□□□□ -1.9
HLA-N-201ENST00000437516 EDA2RQ9HAV5 297 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 DAZ1Q9NQZ3 744 aaKnown RBP3.2□□□□□ -1.9
HLA-N-201ENST00000437516 ZNF580Q9UK33 172 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 ERG28Q9UKR5 140 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 ZNF256Q9Y2P7 627 aaPredicted RBP3.2□□□□□ -1.9
HLA-N-201ENST00000437516 CDH23Q9H251 3354 aa3.2□□□□□ -1.9
HLA-N-201ENST00000437516 USF3Q68DE3 2245 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 IGLV4-3A0A075B6K6 122 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 TRGV11A0A075B6L2 103 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 IGHV1OR15-1A0A075B7D0 117 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 TMEM89A2RUT3 159 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 A4D1N5 150 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 H3BUX3 64 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 I3L3M4 83 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 K7EQG2 157 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 M0QY20 66 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 RHODO00212 210 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 SLC25A20O43772 301 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 MT-ATP8P03928 68 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 CFHR3Q02985 330 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 ATXN8Q156A1 80 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 ZNF56Q15929 161 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 SFTA2Q6UW10 78 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 ANKRD29Q8N6D5 301 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 C20orf203Q8NBC4 194 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 PTH2Q96A98 100 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 PIMREGQ9BSJ6 248 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 PYGO1Q9Y3Y4 419 aa3.19□□□□□ -1.9
HLA-N-201ENST00000437516 TRAV2A0A0B4J234 112 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 A0A0J9YXV3 536 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 A0A0J9YXY3 114 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 TRBV30A0A0K0K1B3 111 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 C9JAW5 83 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 EIF4EBP3O60516 100 aaPredicted RBP3.18□□□□□ -1.9
HLA-N-201ENST00000437516 IGHV4-39P01824 125 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 SRD5A1P18405 259 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 XGP55808 180 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 BLCAPP62952 87 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 FHL3Q13643 280 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 LINC01620Q4KN68 170 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 FAM74A4Q5TZK3 123 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 Q6Q795 121 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 BRD3OSQ6XYD6 125 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 C10orf105Q8TEF2 133 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 WFDC12Q8WWY7 111 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 SPANXDQ9BXN6 97 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 SPANXCQ9NY87 97 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 FRYQ5TBA9 3013 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 RELNP78509 3460 aa3.18□□□□□ -1.9
HLA-N-201ENST00000437516 PIEZO2Q9H5I5 2752 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 CNOT1A5YKK6 2376 aaKnown RBP3.17□□□□□ -1.9
HLA-N-201ENST00000437516 TRAV26-1A0A087WT03 109 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 IGHV4-61A0A0C4DH41 118 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 TRBV10-2A0A0K0K1G8 114 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 TGFAP01135 160 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 IGHV4-38-2P0DP08 117 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 EDN2P20800 178 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 RPL13AP40429 203 aaKnown RBP3.17□□□□□ -1.9
HLA-N-201ENST00000437516 SNRPD3P62318 126 aaKnown RBP3.17□□□□□ -1.9
HLA-N-201ENST00000437516 MRPS36P82909 103 aaKnown RBP3.17□□□□□ -1.9
HLA-N-201ENST00000437516 MRPL23Q16540 153 aaKnown RBP3.17□□□□□ -1.9
HLA-N-201ENST00000437516 ZFAND6Q6FIF0 208 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 Q8N1Y9 231 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 TEX29Q8N6K0 151 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 DEFB104AQ8WTQ1 72 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 NTN5Q8WTR8 489 aaPredicted RBP3.17□□□□□ -1.9
HLA-N-201ENST00000437516 RAX2Q96IS3 184 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 OPRPNQ99935 248 aaPredicted RBP3.17□□□□□ -1.9
HLA-N-201ENST00000437516 TIMM21Q9BVV7 248 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 YAE1D1Q9NRH1 226 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 BRWD1Q9NSI6 2320 aa3.17□□□□□ -1.9
HLA-N-201ENST00000437516 DNAJC13O75165 2243 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms