RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 PPP1R17O96001 155 aa5.65□□□□□ -1.5
SMARCC1-202ENST00000425518 IGHV4-39P01824 125 aa5.65□□□□□ -1.5
SMARCC1-202ENST00000425518 HERVK_113P61574 105 aa5.65□□□□□ -1.5
SMARCC1-202ENST00000425518 SUMO4Q6EEV6 95 aa5.65□□□□□ -1.5
SMARCC1-202ENST00000425518 SDHAF1A6NFY7 115 aa5.65□□□□□ -1.5
SMARCC1-202ENST00000425518 NDUFS8O00217 210 aa5.65□□□□□ -1.5
SMARCC1-202ENST00000425518 TSHBP01222 138 aa5.65□□□□□ -1.5
SMARCC1-202ENST00000425518 TRAV12-2A0A075B6T6 113 aa5.65□□□□□ -1.51
SMARCC1-202ENST00000425518 C19orf54Q5BKX5 351 aa5.65□□□□□ -1.51
SMARCC1-202ENST00000425518 USMG5Q96IX5 58 aa5.65□□□□□ -1.51
SMARCC1-202ENST00000425518 OPRPNQ99935 248 aaPredicted RBP5.65□□□□□ -1.51
SMARCC1-202ENST00000425518 VCYO14598 125 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 ZNF688P0C7X2 276 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 LINC00315P59091 139 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 PMVKQ15126 192 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 TMEM95Q3KNT9 176 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 PTH2Q96A98 100 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 PRO0461Q9UI25 63 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 MUC4Q99102 2169 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 IGHV3-64A0A075B6Q5 118 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 SCGB1C2P0DMR2 95 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 DLX4Q92988 240 aaPredicted RBP5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 DAZ1Q9NQZ3 744 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 PKD1L2Q7Z442 2459 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 TSPAN13O95857 204 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 ID1P41134 155 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 ZNF56Q15929 161 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 ATP6V0BQ99437 205 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 KIF25-AS1Q9Y6Z4 181 aa5.64□□□□□ -1.51
SMARCC1-202ENST00000425518 IGLV4-69A0A075B6H9 119 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 IGIPA6NJ69 53 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 LINC01619G3V211 115 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 IGHG2P01859 326 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 MED14OSP0DP75 135 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 COX6B1P14854 86 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 POLR2KP53803 58 aaKnown RBP5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 CLEC2AQ6UVW9 174 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 FAM19A4Q96LR4 140 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 MDFICQ9P1T7 246 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 VPS13CQ709C8 3753 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 ABCA2Q9BZC7 2435 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 A0A0J9YY99 117 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 H7C2G1 150 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 HTN1P15515 57 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 TSPEAR-AS2P59090 65 aa5.63□□□□□ -1.51
SMARCC1-202ENST00000425518 IGHV4OR15-8A0A075B7B6 117 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 A0A087WW49 117 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 SMCPP49901 116 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 PAPPA-AS1Q5QFB9 102 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 SYT8Q8NBV8 401 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 ZNRF2Q8NHG8 242 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 LGALS3P17931 250 aaKnown RBP5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 UBE2D1P51668 147 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 NOTCH3Q9UM47 2321 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 KLLNB2CW77 178 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 GNLYP22749 145 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 CRIP2P52943 208 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 FOXI1Q12951 378 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 NDUFA11Q86Y39 141 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 RAX2Q96IS3 184 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 PIMREGQ9BSJ6 248 aa5.62□□□□□ -1.51
SMARCC1-202ENST00000425518 A6NDX4 124 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 CFAP126Q5VTH2 177 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 C10orf99Q6UWK7 81 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 APRG1Q8IVJ8 170 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 TMEM141Q96I45 108 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 DUX5Q96PT3 197 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 J3QQQ9 107 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 SPINK13Q1W4C9 94 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 NFE4Q86UQ8 179 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 SPATA25Q9BR10 227 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 POLQO75417 2590 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 TRAV2A0A0B4J234 112 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 CFC1BP0CG36 223 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 CFC1P0CG37 223 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 ATP5J2P56134 94 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 Q8N1Y9 231 aa5.61□□□□□ -1.51
SMARCC1-202ENST00000425518 USP9XQ93008 2570 aaPredicted RBP5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 IGHV3-73A0A0B4J1V6 119 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 CIDEAO60543 219 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 TCL1BO95988 128 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 DCANP1Q8TF63 244 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 C1QTNF4Q9BXJ3 329 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 IGHV4-30-2A0A087WSY4 118 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 TRBV7-9A0A0J9YWB2 115 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 H3BUA1 57 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 NXPH4O95158 308 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 SLC25A29Q8N8R3 303 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 TIMM17AQ99595 171 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 IGHV3-16A0A0C4DH30 117 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 IGHV3-30P01768 117 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 IGHV3-30-5P0DP03 117 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 ZNF876PQ49A33 203 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 POM121L12Q8N7R1 296 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 CCL19Q99731 98 aa5.6□□□□□ -1.51
SMARCC1-202ENST00000425518 CENPEQ02224 2701 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 TRBV27A0A0K0K1C4 114 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 AVPP01185 164 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 LYRM7Q5U5X0 104 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 PRO1854Q9UHT4 67 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms