RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 TRBV12-3P01733 135 aa12.68□□□□□ -0.38
GCFC2-202ENST00000409857 SPCS1Q9Y6A9 102 aa12.68□□□□□ -0.38
GCFC2-202ENST00000409857 TRAV26-2A0A0B4J265 109 aa12.68□□□□□ -0.38
GCFC2-202ENST00000409857 IGKV3D-20A0A0C4DH25 116 aa12.68□□□□□ -0.38
GCFC2-202ENST00000409857 FBLL1A6NHQ2 334 aaKnown RBP12.68□□□□□ -0.38
GCFC2-202ENST00000409857 K7ERJ3 54 aa12.68□□□□□ -0.38
GCFC2-202ENST00000409857 ARL3P36405 182 aa12.68□□□□□ -0.38
GCFC2-202ENST00000409857 SCGB2A1O75556 95 aa12.67□□□□□ -0.38
GCFC2-202ENST00000409857 ZMAT4Q9H898 229 aa12.67□□□□□ -0.38
GCFC2-202ENST00000409857 LINC01546A6NGU7 62 aa12.67□□□□□ -0.38
GCFC2-202ENST00000409857 PF4P02776 101 aa12.66□□□□□ -0.38
GCFC2-202ENST00000409857 LINC01559Q495D7 138 aa12.66□□□□□ -0.38
GCFC2-202ENST00000409857 NXT2Q9NPJ8 142 aaKnown RBP12.66□□□□□ -0.38
GCFC2-202ENST00000409857 ZNF207O43670 478 aaKnown RBP12.66□□□□□ -0.38
GCFC2-202ENST00000409857 BUB3O43684 328 aa12.66□□□□□ -0.38
GCFC2-202ENST00000409857 IGKCP01834 107 aa12.66□□□□□ -0.38
GCFC2-202ENST00000409857 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.66□□□□□ -0.38
GCFC2-202ENST00000409857 G3V4G9 280 aa12.65□□□□□ -0.38
GCFC2-202ENST00000409857 HOXD3P31249 432 aaPredicted RBP12.65□□□□□ -0.38
GCFC2-202ENST00000409857 GPHB5Q86YW7 130 aa12.65□□□□□ -0.38
GCFC2-202ENST00000409857 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
GCFC2-202ENST00000409857 CHAC1Q9BUX1 264 aa12.65□□□□□ -0.38
GCFC2-202ENST00000409857 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
GCFC2-202ENST00000409857 ZFAND3Q9H8U3 227 aa12.65□□□□□ -0.38
GCFC2-202ENST00000409857 SMIM13P0DJ93 91 aa12.65□□□□□ -0.38
GCFC2-202ENST00000409857 ZC2HC1BQ5TFG8 222 aa12.65□□□□□ -0.38
GCFC2-202ENST00000409857 SAMD5Q5TGI4 173 aa12.65□□□□□ -0.38
GCFC2-202ENST00000409857 LINC00482Q8N8I6 264 aa12.65□□□□□ -0.38
GCFC2-202ENST00000409857 IGLV2-18A0A075B6J9 118 aa12.64□□□□□ -0.39
GCFC2-202ENST00000409857 TRBV25-1A0A075B6N4 114 aa12.64□□□□□ -0.39
GCFC2-202ENST00000409857 NEGR1Q7Z3B1 354 aa12.64□□□□□ -0.39
GCFC2-202ENST00000409857 SMIM17P0DL12 118 aa12.63□□□□□ -0.39
GCFC2-202ENST00000409857 SLURP1P55000 103 aa12.63□□□□□ -0.39
GCFC2-202ENST00000409857 Q8N8P6 123 aa12.63□□□□□ -0.39
GCFC2-202ENST00000409857 UFC1Q9Y3C8 167 aa12.63□□□□□ -0.39
GCFC2-202ENST00000409857 LGALS9O00182 355 aa12.63□□□□□ -0.39
GCFC2-202ENST00000409857 FABP2P12104 132 aa12.63□□□□□ -0.39
GCFC2-202ENST00000409857 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
GCFC2-202ENST00000409857 MRPL35Q9NZE8 188 aaKnown RBP12.63□□□□□ -0.39
GCFC2-202ENST00000409857 NDUFA4O00483 81 aa12.62□□□□□ -0.39
GCFC2-202ENST00000409857 DPM2O94777 84 aa12.62□□□□□ -0.39
GCFC2-202ENST00000409857 TRAV8-2A0A0B4J237 113 aa12.62□□□□□ -0.39
GCFC2-202ENST00000409857 MAPKAPK5-AS1Q8N8E1 139 aa12.62□□□□□ -0.39
GCFC2-202ENST00000409857 IGHV7-4-1A0A0J9YVY3 117 aa12.61□□□□□ -0.39
GCFC2-202ENST00000409857 SPRY2O43597 315 aa12.61□□□□□ -0.39
GCFC2-202ENST00000409857 NRACQ8N912 160 aa12.61□□□□□ -0.39
GCFC2-202ENST00000409857 DLX4Q92988 240 aaPredicted RBP12.61□□□□□ -0.39
GCFC2-202ENST00000409857 NHP2Q9NX24 153 aaKnown RBP12.61□□□□□ -0.39
GCFC2-202ENST00000409857 WNK1Q9H4A3 2382 aa12.61□□□□□ -0.39
GCFC2-202ENST00000409857 OR5A1Q8NGJ0 315 aa12.61□□□□□ -0.39
GCFC2-202ENST00000409857 HIGD1BQ9P298 99 aa12.61□□□□□ -0.39
GCFC2-202ENST00000409857 OVOL1O14753 267 aa12.6□□□□□ -0.39
GCFC2-202ENST00000409857 PHLDA1Q8WV24 401 aaPredicted RBP12.6□□□□□ -0.39
GCFC2-202ENST00000409857 RBAKDNA6NC62 111 aa12.59□□□□□ -0.39
GCFC2-202ENST00000409857 ATP5LO75964 103 aa12.59□□□□□ -0.39
GCFC2-202ENST00000409857 SYNJ2BPP57105 145 aa12.59□□□□□ -0.39
GCFC2-202ENST00000409857 SAMD13Q5VXD3 122 aa12.59□□□□□ -0.39
GCFC2-202ENST00000409857 PEMTQ9UBM1 199 aa12.59□□□□□ -0.39
GCFC2-202ENST00000409857 J3KRW8 73 aa12.59□□□□□ -0.39
GCFC2-202ENST00000409857 LAGE3Q14657 143 aa12.59□□□□□ -0.39
GCFC2-202ENST00000409857 TMEM78Q5T7P6 136 aa12.59□□□□□ -0.39
GCFC2-202ENST00000409857 VWFP04275 2813 aa12.59□□□□□ -0.39
GCFC2-202ENST00000409857 CEND1Q8N111 149 aa12.58□□□□□ -0.4
GCFC2-202ENST00000409857 SLC50A1Q9BRV3 221 aa12.58□□□□□ -0.4
GCFC2-202ENST00000409857 TRRAPQ9Y4A5 3859 aa12.58□□□□□ -0.4
GCFC2-202ENST00000409857 K7EMT4 169 aa12.58□□□□□ -0.4
GCFC2-202ENST00000409857 PRR9Q5T870 116 aa12.58□□□□□ -0.4
GCFC2-202ENST00000409857 AGRNO00468 2067 aa12.58□□□□□ -0.4
GCFC2-202ENST00000409857 RPL24P83731 157 aaKnown RBP12.57□□□□□ -0.4
GCFC2-202ENST00000409857 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
GCFC2-202ENST00000409857 UNQ9165/PRO28630Q6UXU0 137 aa12.57□□□□□ -0.4
GCFC2-202ENST00000409857 H3BVH4 76 aa12.57□□□□□ -0.4
GCFC2-202ENST00000409857 SMPXQ9UHP9 88 aa12.57□□□□□ -0.4
GCFC2-202ENST00000409857 TEX48A0A1B0GUV7 120 aa12.56□□□□□ -0.4
GCFC2-202ENST00000409857 TM2D2Q9BX73 214 aa12.56□□□□□ -0.4
GCFC2-202ENST00000409857 DAZ1Q9NQZ3 744 aaKnown RBP12.56□□□□□ -0.4
GCFC2-202ENST00000409857 A0A087WX48 190 aa12.55□□□□□ -0.4
GCFC2-202ENST00000409857 DEFB1P60022 68 aa12.55□□□□□ -0.4
GCFC2-202ENST00000409857 DNHD1Q96M86 4753 aa12.54□□□□□ -0.4
GCFC2-202ENST00000409857 INSL3P51460 131 aa12.54□□□□□ -0.4
GCFC2-202ENST00000409857 METTL26Q96S19 204 aa12.54□□□□□ -0.4
GCFC2-202ENST00000409857 PSMG4Q5JS54 123 aa12.54□□□□□ -0.4
GCFC2-202ENST00000409857 C20orf173Q96LM9 149 aa12.54□□□□□ -0.4
GCFC2-202ENST00000409857 WIPF1O43516 503 aa12.53□□□□□ -0.4
GCFC2-202ENST00000409857 SCGB1A1P11684 91 aa12.53□□□□□ -0.4
GCFC2-202ENST00000409857 C9orf66Q5T8R8 295 aa12.53□□□□□ -0.4
GCFC2-202ENST00000409857 C9orf47Q6ZRZ4 202 aa12.53□□□□□ -0.4
GCFC2-202ENST00000409857 IGLL5B9A064 214 aa12.53□□□□□ -0.4
GCFC2-202ENST00000409857 C16orf92Q96LL3 132 aa12.53□□□□□ -0.4
GCFC2-202ENST00000409857 M0R381 172 aa12.52□□□□□ -0.41
GCFC2-202ENST00000409857 WFDC2Q14508 124 aa12.52□□□□□ -0.41
GCFC2-202ENST00000409857 CMYA5Q8N3K9 4069 aa12.52□□□□□ -0.41
GCFC2-202ENST00000409857 E9PLD3 99 aa12.51□□□□□ -0.41
GCFC2-202ENST00000409857 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.51□□□□□ -0.41
GCFC2-202ENST00000409857 C12orf74Q32Q52 190 aa12.51□□□□□ -0.41
GCFC2-202ENST00000409857 HIST1H4GQ99525 98 aa12.51□□□□□ -0.41
GCFC2-202ENST00000409857 IGHV4-4A0A075B6R2 117 aa12.51□□□□□ -0.41
GCFC2-202ENST00000409857 A0A1B0GV72 72 aa12.51□□□□□ -0.41
GCFC2-202ENST00000409857 AMTNQ6UX39 209 aa12.51□□□□□ -0.41
GCFC2-202ENST00000409857 MTURNQ8N3F0 131 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms