RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 A8MWP4 228 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 MRPS36P82909 103 aaKnown RBP2.52□□□□□ -2.01
XRN1-202ENST00000392981 CMC2Q9NRP2 79 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 ZFC3H1O60293 1989 aaKnown RBP2.51□□□□□ -2.01
XRN1-202ENST00000392981 IGHV1-24A0A0C4DH33 117 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 IGHV3-64DA0A0J9YX35 117 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 LINC01549A6NIU2 74 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 IQCF6A8MYZ5 107 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 DEFB110Q30KQ9 67 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 Q6AWC8 147 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 C2orf91Q6ZV80 131 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 RNASE6Q93091 150 aaKnown RBP2.51□□□□□ -2.01
XRN1-202ENST00000392981 CYTL1Q9NRR1 136 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 LINC00312Q9Y6C7 94 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 SLX4Q8IY92 1834 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 PATJQ8NI35 1801 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 ZNF236Q9UL36 1845 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 MUC21A0A0G2JKD1 596 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 MUC21A0A140T8X8 626 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 D6R8Y8 96 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 IGKV3-20P01619 116 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 IGHV1-46P01743 117 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 C1QAP02745 245 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 MT-ATP8P03928 68 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 MUSTN1Q8IVN3 82 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 CHD3Q12873 2000 aaKnown RBP2.51□□□□□ -2.01
XRN1-202ENST00000392981 TRBV27A0A0K0K1C4 114 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 KLLNB2CW77 178 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 PSMB8P28062 276 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 FXYD3Q14802 87 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 MDFICQ9P1T7 246 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 MINOS1-NBL1R4GNA1 71 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 ALPK3Q96L96 1907 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 SSC5DA1L4H1 1573 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 A0A1B0GW54 56 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 DEFB108AA8MXU0 73 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 PITX3O75364 302 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 NOVP48745 357 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 DEFB119Q8N690 84 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 CUL9Q8IWT3 2517 aa2.51□□□□□ -2.01
XRN1-202ENST00000392981 IGKV6D-41A0A0C4DH26 115 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 A0A1W2PPM0 123 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 IGKCP01834 107 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 CFC1P0CG37 223 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 DIAPH2-AS1Q14236 149 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 SS18Q15532 418 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 ARHGAP5-AS1Q96IT6 56 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 TSC2P49815 1807 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 IGHV3-43A0A0B4J1X8 118 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 A0A1B0GUT8 65 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 FXYD1O00168 92 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 BLCAPP62952 87 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 C14orf177Q52M58 125 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 LHFPL1Q86WI0 220 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 PRR15Q8IV56 129 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 FAM19A2Q8N3H0 131 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 LYSTQ99698 3801 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 SPTBP11277 2137 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 IGKV3D-20A0A0C4DH25 116 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 hADV29S1A0JD25 119 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 C11orf86A6NJI1 115 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 HLA-DRB4P13762 266 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 Q0VG73 95 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 KISS1Q15726 138 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 IL17AQ16552 155 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 MIAQ16674 131 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 HLA-DRB4X5D2U9 266 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 HELZP42694 1942 aaKnown RBP2.5□□□□□ -2.01
XRN1-202ENST00000392981 ICE1Q9Y2F5 2266 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 M0R378 163 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 UQCRQO14949 82 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 MPV17P39210 176 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 FOXF1Q12946 379 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 C9orf129Q5T035 196 aaKnown RBP2.5□□□□□ -2.01
XRN1-202ENST00000392981 PRR15LQ9BU68 103 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 LRBAP50851 2863 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 CITO14578 2027 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 SCN5AQ14524 2016 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 TRAV12-2A0A075B6T6 113 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 TRBV6-7A0A0A0MS04 114 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 ATOX1O00244 68 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 IGHG2P01859 326 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 PRB2P02812 416 aaPredicted RBP2.5□□□□□ -2.01
XRN1-202ENST00000392981 SCRT1Q9BWW7 348 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 C14orf132Q9NPU4 83 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 ANK1P16157 1881 aa2.5□□□□□ -2.01
XRN1-202ENST00000392981 KIF26BQ2KJY2 2108 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 TRAV12-1A0A0B4J245 112 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 SOCS1O15524 211 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 DSCR8Q96T75 97 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 A0A1B0GUV1 79 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 IGLV1-47P01700 117 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 ETDBQ3ZM63 59 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 TEN1Q86WV5 123 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 C15orf53Q8NAA6 179 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 C18orf32Q8TCD1 76 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 C2orf16Q68DN1 1984 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 MICAL3Q7RTP6 2002 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 MSMBP08118 114 aa2.49□□□□□ -2.01
XRN1-202ENST00000392981 P0C879 139 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms