RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 LENEPQ9Y5L5 61 aa18.44■□□□□ 0.54
RAPGEF1-203ENST00000372195 Q8N7P7 452 aa18.43■□□□□ 0.54
RAPGEF1-203ENST00000372195 C1orf43Q9BWL3 253 aa18.43■□□□□ 0.54
RAPGEF1-203ENST00000372195 FAM236AA0A1B0GUQ0 79 aa18.43■□□□□ 0.54
RAPGEF1-203ENST00000372195 FAM236BA0A1B0GV22 79 aa18.43■□□□□ 0.54
RAPGEF1-203ENST00000372195 SEM1Q6ZVN7 128 aa18.42■□□□□ 0.54
RAPGEF1-203ENST00000372195 ACACAQ13085 2346 aa18.42■□□□□ 0.54
RAPGEF1-203ENST00000372195 LYPD6Q86Y78 171 aa18.42■□□□□ 0.54
RAPGEF1-203ENST00000372195 WFDC11Q8NEX6 87 aa18.41■□□□□ 0.54
RAPGEF1-203ENST00000372195 TOMM6Q96B49 74 aa18.41■□□□□ 0.54
RAPGEF1-203ENST00000372195 TNRC6BQ9UPQ9 1833 aaKnown RBP18.41■□□□□ 0.54
RAPGEF1-203ENST00000372195 CHD3Q12873 2000 aaKnown RBP18.41■□□□□ 0.54
RAPGEF1-203ENST00000372195 CLPSL1A2RUU4 121 aa18.41■□□□□ 0.54
RAPGEF1-203ENST00000372195 COX7A2LO14548 114 aa18.41■□□□□ 0.54
RAPGEF1-203ENST00000372195 CACNA1BQ00975 2339 aa18.41■□□□□ 0.54
RAPGEF1-203ENST00000372195 A0A1W2PNU3 283 aaPredicted RBP18.4■□□□□ 0.54
RAPGEF1-203ENST00000372195 IGFL2Q6UWQ7 119 aa18.4■□□□□ 0.54
RAPGEF1-203ENST00000372195 ETDCA0A1B0GVM5 59 aa18.4■□□□□ 0.54
RAPGEF1-203ENST00000372195 A0A1B0GX51 115 aa18.4■□□□□ 0.54
RAPGEF1-203ENST00000372195 CEMP1Q6PRD7 247 aaPredicted RBP18.39■□□□□ 0.54
RAPGEF1-203ENST00000372195 MDFICQ9P1T7 246 aa18.39■□□□□ 0.53
RAPGEF1-203ENST00000372195 C2orf70A6NJV1 201 aa18.39■□□□□ 0.53
RAPGEF1-203ENST00000372195 MSMPQ1L6U9 139 aa18.39■□□□□ 0.53
RAPGEF1-203ENST00000372195 UNQ9165/PRO28630Q6UXU0 137 aa18.39■□□□□ 0.53
RAPGEF1-203ENST00000372195 RNF138Q8WVD3 245 aa18.39■□□□□ 0.53
RAPGEF1-203ENST00000372195 OBSL1O75147 1896 aa18.38■□□□□ 0.53
RAPGEF1-203ENST00000372195 Q6ZSR3 168 aa18.38■□□□□ 0.53
RAPGEF1-203ENST00000372195 DAZ2Q13117 558 aaKnown RBP18.38■□□□□ 0.53
RAPGEF1-203ENST00000372195 DAZ4Q86SG3 579 aaKnown RBP18.38■□□□□ 0.53
RAPGEF1-203ENST00000372195 DAZ3Q9NR90 486 aaKnown RBP18.38■□□□□ 0.53
RAPGEF1-203ENST00000372195 PTH2Q96A98 100 aa18.38■□□□□ 0.53
RAPGEF1-203ENST00000372195 TMEM258P61165 79 aa18.38■□□□□ 0.53
RAPGEF1-203ENST00000372195 ABCA1O95477 2261 aa18.37■□□□□ 0.53
RAPGEF1-203ENST00000372195 A0A0B4J2C4 111 aa18.37■□□□□ 0.53
RAPGEF1-203ENST00000372195 LINC01620Q4KN68 170 aa18.37■□□□□ 0.53
RAPGEF1-203ENST00000372195 C9orf66Q5T8R8 295 aa18.37■□□□□ 0.53
RAPGEF1-203ENST00000372195 C9orf47Q6ZRZ4 202 aa18.37■□□□□ 0.53
RAPGEF1-203ENST00000372195 TIMM17AQ99595 171 aa18.37■□□□□ 0.53
RAPGEF1-203ENST00000372195 SPANXDQ9BXN6 97 aa18.37■□□□□ 0.53
RAPGEF1-203ENST00000372195 LOXL1Q08397 574 aaPredicted RBP18.36■□□□□ 0.53
RAPGEF1-203ENST00000372195 HHLA3Q9XRX5 114 aa18.36■□□□□ 0.53
RAPGEF1-203ENST00000372195 TIRAPP58753 221 aa18.36■□□□□ 0.53
RAPGEF1-203ENST00000372195 COL4A3Q01955 1670 aa18.36■□□□□ 0.53
RAPGEF1-203ENST00000372195 C11orf86A6NJI1 115 aa18.35■□□□□ 0.53
RAPGEF1-203ENST00000372195 FOXI1Q12951 378 aa18.35■□□□□ 0.53
RAPGEF1-203ENST00000372195 MRPL23Q16540 153 aaKnown RBP18.35■□□□□ 0.53
RAPGEF1-203ENST00000372195 F8W735 103 aaPredicted RBP18.35■□□□□ 0.53
RAPGEF1-203ENST00000372195 P0DMU3 169 aa18.35■□□□□ 0.53
RAPGEF1-203ENST00000372195 FAM231AP0DMU4 169 aa18.35■□□□□ 0.53
RAPGEF1-203ENST00000372195 FAM231CP0DMU5 169 aa18.35■□□□□ 0.53
RAPGEF1-203ENST00000372195 ADAMTS9Q9P2N4 1935 aa18.35■□□□□ 0.53
RAPGEF1-203ENST00000372195 TMEM61Q8N0U2 210 aa18.35■□□□□ 0.53
RAPGEF1-203ENST00000372195 C10orf105Q8TEF2 133 aa18.35■□□□□ 0.53
RAPGEF1-203ENST00000372195 LGALS9O00182 355 aa18.34■□□□□ 0.53
RAPGEF1-203ENST00000372195 TP73-AS1Q9UF72 201 aa18.34■□□□□ 0.53
RAPGEF1-203ENST00000372195 TP53TG3Q9ULZ0 132 aa18.34■□□□□ 0.53
RAPGEF1-203ENST00000372195 GTF3C1Q12789 2109 aa18.33■□□□□ 0.53
RAPGEF1-203ENST00000372195 ZNF503Q96F45 646 aa18.33■□□□□ 0.53
RAPGEF1-203ENST00000372195 TRBV7-3A0A075B6L6 115 aa18.33■□□□□ 0.53
RAPGEF1-203ENST00000372195 ACYP1P07311 99 aa18.33■□□□□ 0.53
RAPGEF1-203ENST00000372195 WFDC9Q8NEX5 89 aa18.33■□□□□ 0.53
RAPGEF1-203ENST00000372195 TEN1Q86WV5 123 aa18.33■□□□□ 0.52
RAPGEF1-203ENST00000372195 DEFB135Q30KP9 77 aa18.33■□□□□ 0.52
RAPGEF1-203ENST00000372195 ATP5G1P05496 136 aa18.32■□□□□ 0.52
RAPGEF1-203ENST00000372195 SPART-AS1P0CW21 52 aa18.32■□□□□ 0.52
RAPGEF1-203ENST00000372195 MED13Q9UHV7 2174 aa18.31■□□□□ 0.52
RAPGEF1-203ENST00000372195 LECT2O14960 151 aa18.31■□□□□ 0.52
RAPGEF1-203ENST00000372195 PSMB8P28062 276 aa18.31■□□□□ 0.52
RAPGEF1-203ENST00000372195 G3V4G9 280 aa18.3■□□□□ 0.52
RAPGEF1-203ENST00000372195 ODF1Q14990 250 aa18.3■□□□□ 0.52
RAPGEF1-203ENST00000372195 LINC00322Q6ZN03 302 aaPredicted RBP18.3■□□□□ 0.52
RAPGEF1-203ENST00000372195 NFE4Q86UQ8 179 aa18.3■□□□□ 0.52
RAPGEF1-203ENST00000372195 ZNF106Q9H2Y7 1883 aaKnown RBP18.3■□□□□ 0.52
RAPGEF1-203ENST00000372195 DENND4AQ7Z401 1863 aa18.29■□□□□ 0.52
RAPGEF1-203ENST00000372195 NACAE9PAV3 2078 aa18.29■□□□□ 0.52
RAPGEF1-203ENST00000372195 LINC01548A6NM66 108 aa18.29■□□□□ 0.52
RAPGEF1-203ENST00000372195 ZNF80P51504 273 aaPredicted RBP18.29■□□□□ 0.52
RAPGEF1-203ENST00000372195 SPATA25Q9BR10 227 aa18.29■□□□□ 0.52
RAPGEF1-203ENST00000372195 E9PLD3 99 aa18.28■□□□□ 0.52
RAPGEF1-203ENST00000372195 FUSP35637 526 aaKnown RBP eCLIP18.28■□□□□ 0.52
RAPGEF1-203ENST00000372195 VSIG2Q96IQ7 327 aa18.28■□□□□ 0.52
RAPGEF1-203ENST00000372195 IGLV1-47P01700 117 aa18.28■□□□□ 0.52
RAPGEF1-203ENST00000372195 CTRLP40313 264 aa18.28■□□□□ 0.52
RAPGEF1-203ENST00000372195 IGKV1D-37A0A075B6S9 117 aa18.27■□□□□ 0.52
RAPGEF1-203ENST00000372195 C11orf1Q9H5F2 150 aa18.27■□□□□ 0.52
RAPGEF1-203ENST00000372195 MALRD1Q5VYJ5 2156 aa18.27■□□□□ 0.51
RAPGEF1-203ENST00000372195 GPR179Q6PRD1 2367 aa18.27■□□□□ 0.51
RAPGEF1-203ENST00000372195 HIST2H2BDQ6DRA6 164 aa18.26■□□□□ 0.51
RAPGEF1-203ENST00000372195 MIR7-3HGQ8N6C7 128 aa18.26■□□□□ 0.51
RAPGEF1-203ENST00000372195 RNF152Q8N8N0 203 aa18.26■□□□□ 0.51
RAPGEF1-203ENST00000372195 TNRC6AQ8NDV7 1962 aaKnown RBP18.25■□□□□ 0.51
RAPGEF1-203ENST00000372195 C1orf229Q6ZS94 237 aaPredicted RBP18.25■□□□□ 0.51
RAPGEF1-203ENST00000372195 SPATA12Q7Z6I5 190 aa18.25■□□□□ 0.51
RAPGEF1-203ENST00000372195 GDF5OSQ5U4N7 250 aa18.25■□□□□ 0.51
RAPGEF1-203ENST00000372195 HIGD1BQ9P298 99 aa18.25■□□□□ 0.51
RAPGEF1-203ENST00000372195 KLK12Q9UKR0 248 aa18.25■□□□□ 0.51
RAPGEF1-203ENST00000372195 ZGRF1Q86YA3 2104 aa18.25■□□□□ 0.51
RAPGEF1-203ENST00000372195 FANCD2OSQ96PS1 177 aa18.25■□□□□ 0.51
RAPGEF1-203ENST00000372195 SIRPDQ9H106 197 aa18.24■□□□□ 0.51
RAPGEF1-203ENST00000372195 C19orf71A6NCJ1 209 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms