RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 C20orf173Q96LM9 149 aa11.12□□□□□ -0.63
PRKN-204ENST00000366896 GEMIN7Q9H840 131 aaKnown RBP11.12□□□□□ -0.63
PRKN-204ENST00000366896 CREBBPQ92793 2442 aa11.12□□□□□ -0.63
PRKN-204ENST00000366896 TRAV41A0A0B4J266 112 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 TGFAP01135 160 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 GATA3P23771 443 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 SPANXN1Q5VSR9 72 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 ZNF418Q8TF45 676 aaPredicted RBP11.11□□□□□ -0.63
PRKN-204ENST00000366896 TOMM6Q96B49 74 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 ZNF469Q96JG9 3925 aaPredicted RBP11.11□□□□□ -0.63
PRKN-204ENST00000366896 TRBV7-9A0A0J9YWB2 115 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 TMEM238LA0A1B0GVL6 79 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 A6NJY4 79 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 H3BVH4 76 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 J3KRW8 73 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 UBE2D1P51668 147 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 ORMDL2Q53FV1 153 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 C16orf92Q96LL3 132 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 SCGB3A1Q96QR1 104 aa11.11□□□□□ -0.63
PRKN-204ENST00000366896 OVOL1O14753 267 aa11.1□□□□□ -0.63
PRKN-204ENST00000366896 SPRY2O43597 315 aa11.1□□□□□ -0.63
PRKN-204ENST00000366896 CRYBA4P53673 196 aa11.1□□□□□ -0.63
PRKN-204ENST00000366896 WFDC12Q8WWY7 111 aa11.1□□□□□ -0.63
PRKN-204ENST00000366896 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
PRKN-204ENST00000366896 H3BUA1 57 aa11.1□□□□□ -0.63
PRKN-204ENST00000366896 NDUFA4O00483 81 aa11.1□□□□□ -0.63
PRKN-204ENST00000366896 PRADC1Q9BSG0 188 aa11.1□□□□□ -0.63
PRKN-204ENST00000366896 NOTCH2Q04721 2471 aa11.1□□□□□ -0.63
PRKN-204ENST00000366896 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 SPINK8P0C7L1 97 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 DEFB1P60022 68 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 FHL3Q13643 280 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 TRAV21A0A0B4J279 112 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 SOCS3O14543 225 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 TSPAN13O95857 204 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 AVPP01185 164 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 UBE2D3P61077 147 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 UBE2D2P62837 147 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 UNQ9165/PRO28630Q6UXU0 137 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 APRG1Q8IVJ8 170 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 ZFAND2AQ8N6M9 145 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 KLK15Q9H2R5 256 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 MYO9AB2RTY4 2548 aa11.09□□□□□ -0.63
PRKN-204ENST00000366896 J3QLI3 93 aa11.08□□□□□ -0.64
PRKN-204ENST00000366896 M0R381 172 aa11.08□□□□□ -0.64
PRKN-204ENST00000366896 FLNBO75369 2602 aaKnown RBP11.08□□□□□ -0.64
PRKN-204ENST00000366896 ZNF815PA8K554 130 aa11.08□□□□□ -0.64
PRKN-204ENST00000366896 MT-ATP8P03928 68 aa11.08□□□□□ -0.64
PRKN-204ENST00000366896 ARL3P36405 182 aa11.08□□□□□ -0.64
PRKN-204ENST00000366896 PSMB2P49721 201 aa11.08□□□□□ -0.64
PRKN-204ENST00000366896 Q6ZUT4 128 aa11.08□□□□□ -0.64
PRKN-204ENST00000366896 GPHB5Q86YW7 130 aa11.08□□□□□ -0.64
PRKN-204ENST00000366896 BAALCQ8WXS3 180 aa11.08□□□□□ -0.64
PRKN-204ENST00000366896 FAM19A4Q96LR4 140 aa11.08□□□□□ -0.64
PRKN-204ENST00000366896 SUMO2P61956 95 aaKnown RBP11.07□□□□□ -0.64
PRKN-204ENST00000366896 BRD3OSQ6XYD6 125 aa11.07□□□□□ -0.64
PRKN-204ENST00000366896 PLEKHB2Q96CS7 222 aa11.07□□□□□ -0.64
PRKN-204ENST00000366896 USMG5Q96IX5 58 aa11.07□□□□□ -0.64
PRKN-204ENST00000366896 ZANQ9Y493 2812 aa11.07□□□□□ -0.64
PRKN-204ENST00000366896 CD7P09564 240 aa11.07□□□□□ -0.64
PRKN-204ENST00000366896 ZFP2Q6ZN57 461 aa11.07□□□□□ -0.64
PRKN-204ENST00000366896 OR10J6PQ8NGY7 276 aa11.07□□□□□ -0.64
PRKN-204ENST00000366896 FLNAP21333 2647 aaKnown RBP11.07□□□□□ -0.64
PRKN-204ENST00000366896 LOC107984156A0A0G2JMH3 177 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 PPP1R17O96001 155 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 XGP55808 180 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 SCGB1D4Q6XE38 83 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 ARL17AQ8IVW1 177 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 PPDPFLQ8WWR9 84 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 RASL10AQ92737 203 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 CARD19Q96LW7 228 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 DPH3P1Q9H4G8 78 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 IGHV1-69DA0A0B4J2H0 117 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 IGHV1-69P01742 117 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 IGHV4-38-2P0DP08 117 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 POM121L12Q8N7R1 296 aa11.06□□□□□ -0.64
PRKN-204ENST00000366896 PRSS29PA6NIE9 313 aa11.05□□□□□ -0.64
PRKN-204ENST00000366896 KRTAP1-1Q07627 177 aa11.05□□□□□ -0.64
PRKN-204ENST00000366896 SRSF9Q13242 221 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRKN-204ENST00000366896 LYRM7Q5U5X0 104 aa11.05□□□□□ -0.64
PRKN-204ENST00000366896 C2orf66Q6UXQ4 117 aa11.05□□□□□ -0.64
PRKN-204ENST00000366896 TEN1Q86WV5 123 aa11.05□□□□□ -0.64
PRKN-204ENST00000366896 PTH2Q96A98 100 aa11.05□□□□□ -0.64
PRKN-204ENST00000366896 ASIPP42127 132 aa11.05□□□□□ -0.64
PRKN-204ENST00000366896 SFTA2Q6UW10 78 aa11.04□□□□□ -0.64
PRKN-204ENST00000366896 RPL32P62910 135 aaKnown RBP11.04□□□□□ -0.64
PRKN-204ENST00000366896 SBSPONQ8IVN8 264 aa11.04□□□□□ -0.64
PRKN-204ENST00000366896 VCX2Q9H322 139 aa11.04□□□□□ -0.64
PRKN-204ENST00000366896 NXPH4O95158 308 aa11.03□□□□□ -0.64
PRKN-204ENST00000366896 IGHV3-11P01762 117 aa11.03□□□□□ -0.64
PRKN-204ENST00000366896 IGHG2P01859 326 aa11.03□□□□□ -0.64
PRKN-204ENST00000366896 NDUFA11Q86Y39 141 aa11.03□□□□□ -0.64
PRKN-204ENST00000366896 RPL39LQ96EH5 51 aaKnown RBP11.03□□□□□ -0.64
PRKN-204ENST00000366896 F6UB75 175 aa11.03□□□□□ -0.64
PRKN-204ENST00000366896 CSPG4Q6UVK1 2322 aa11.03□□□□□ -0.64
PRKN-204ENST00000366896 TCL1BO95988 128 aa11.02□□□□□ -0.64
PRKN-204ENST00000366896 FSHBP01225 129 aa11.02□□□□□ -0.64
PRKN-204ENST00000366896 LY6EQ16553 131 aa11.02□□□□□ -0.64
PRKN-204ENST00000366896 KLHL30-AS1Q8NEE0 82 aa11.02□□□□□ -0.64
PRKN-204ENST00000366896 OTOGQ6ZRI0 2925 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms