RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 SND1-IT1Q9HBX3 110 aa13.14□□□□□ -0.31
COL4A2-201ENST00000360467 MSMPQ1L6U9 139 aa13.14□□□□□ -0.31
COL4A2-201ENST00000360467 TRBV7-3A0A075B6L6 115 aa13.14□□□□□ -0.31
COL4A2-201ENST00000360467 A0A1W2PPM0 123 aa13.14□□□□□ -0.31
COL4A2-201ENST00000360467 DENND4AQ7Z401 1863 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 IGHV4-31P0DP07 118 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 LINC00173Q6ZV60 143 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 PPDPFLQ8WWR9 84 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 MUSTN1Q8IVN3 82 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 NDUFA1O15239 70 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 P0DMU3 169 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 FAM231AP0DMU4 169 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 FAM231CP0DMU5 169 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 TMEM61Q8N0U2 210 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 NTN5Q8WTR8 489 aaPredicted RBP13.13□□□□□ -0.31
COL4A2-201ENST00000360467 TP53TG3Q9ULZ0 132 aa13.13□□□□□ -0.31
COL4A2-201ENST00000360467 HERV-K104P63124 156 aa13.12□□□□□ -0.31
COL4A2-201ENST00000360467 RNF152Q8N8N0 203 aa13.12□□□□□ -0.31
COL4A2-201ENST00000360467 PLXNB3Q9ULL4 1909 aa13.12□□□□□ -0.31
COL4A2-201ENST00000360467 ODF3L1Q8IXM7 274 aa13.12□□□□□ -0.31
COL4A2-201ENST00000360467 RNF183Q96D59 192 aa13.12□□□□□ -0.31
COL4A2-201ENST00000360467 MAP6D1Q9H9H5 199 aa13.12□□□□□ -0.31
COL4A2-201ENST00000360467 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL4A2-201ENST00000360467 K7EP34 96 aa13.12□□□□□ -0.31
COL4A2-201ENST00000360467 GTF3C1Q12789 2109 aa13.11□□□□□ -0.31
COL4A2-201ENST00000360467 GPR179Q6PRD1 2367 aa13.11□□□□□ -0.31
COL4A2-201ENST00000360467 A6NDX4 124 aa13.11□□□□□ -0.31
COL4A2-201ENST00000360467 CHKB-CPT1BH3BT56 60 aa13.11□□□□□ -0.31
COL4A2-201ENST00000360467 CEMP1Q6PRD7 247 aaPredicted RBP13.11□□□□□ -0.31
COL4A2-201ENST00000360467 TRAV26-1A0A087WT03 109 aa13.11□□□□□ -0.31
COL4A2-201ENST00000360467 RIF1Q5UIP0 2472 aaKnown RBP13.11□□□□□ -0.31
COL4A2-201ENST00000360467 SH2D6Q7Z4S9 175 aa13.11□□□□□ -0.31
COL4A2-201ENST00000360467 CFC1BP0CG36 223 aa13.1□□□□□ -0.31
COL4A2-201ENST00000360467 CFC1P0CG37 223 aa13.1□□□□□ -0.31
COL4A2-201ENST00000360467 Q6ZVH6 145 aa13.1□□□□□ -0.31
COL4A2-201ENST00000360467 ZNF747Q9BV97 191 aa13.1□□□□□ -0.31
COL4A2-201ENST00000360467 LINC00482Q8N8I6 264 aa13.1□□□□□ -0.31
COL4A2-201ENST00000360467 PKIGQ9Y2B9 76 aa13.1□□□□□ -0.31
COL4A2-201ENST00000360467 ZNF843Q8N446 348 aa13.1□□□□□ -0.31
COL4A2-201ENST00000360467 TNRC6BQ9UPQ9 1833 aaKnown RBP13.1□□□□□ -0.31
COL4A2-201ENST00000360467 ZNF106Q9H2Y7 1883 aaKnown RBP13.1□□□□□ -0.31
COL4A2-201ENST00000360467 OPRPNQ99935 248 aaPredicted RBP13.1□□□□□ -0.31
COL4A2-201ENST00000360467 GAGE12HA6NDE8 117 aa13.1□□□□□ -0.31
COL4A2-201ENST00000360467 IGHG2P01859 326 aa13.1□□□□□ -0.31
COL4A2-201ENST00000360467 LENEPQ9Y5L5 61 aa13.1□□□□□ -0.31
COL4A2-201ENST00000360467 FUSP35637 526 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL4A2-201ENST00000360467 SPAG11BQ08648 103 aa13.09□□□□□ -0.31
COL4A2-201ENST00000360467 C5orf47Q569G3 176 aa13.09□□□□□ -0.31
COL4A2-201ENST00000360467 ANKRD29Q8N6D5 301 aa13.09□□□□□ -0.31
COL4A2-201ENST00000360467 C20orf144Q9BQM9 153 aa13.09□□□□□ -0.31
COL4A2-201ENST00000360467 CCL25O15444 150 aa13.09□□□□□ -0.31
COL4A2-201ENST00000360467 Q8NFD4 153 aa13.09□□□□□ -0.31
COL4A2-201ENST00000360467 F8W1H4 67 aa13.09□□□□□ -0.31
COL4A2-201ENST00000360467 NACAE9PAV3 2078 aa13.08□□□□□ -0.31
COL4A2-201ENST00000360467 GPHB5Q86YW7 130 aa13.08□□□□□ -0.32
COL4A2-201ENST00000360467 TMEM131Q92545 1883 aa13.07□□□□□ -0.32
COL4A2-201ENST00000360467 IFITM1P13164 125 aa13.07□□□□□ -0.32
COL4A2-201ENST00000360467 NDUFA11Q86Y39 141 aa13.07□□□□□ -0.32
COL4A2-201ENST00000360467 BAALCQ8WXS3 180 aa13.06□□□□□ -0.32
COL4A2-201ENST00000360467 M0R2N4 97 aa13.06□□□□□ -0.32
COL4A2-201ENST00000360467 NPSP0C0P6 89 aa13.06□□□□□ -0.32
COL4A2-201ENST00000360467 A0A096LNI7 61 aa13.06□□□□□ -0.32
COL4A2-201ENST00000360467 K7EP13 123 aa13.05□□□□□ -0.32
COL4A2-201ENST00000360467 LY6G6DO95868 133 aa13.05□□□□□ -0.32
COL4A2-201ENST00000360467 IGKV3D-7A0A0C4DH55 119 aa13.05□□□□□ -0.32
COL4A2-201ENST00000360467 TMEM263Q8WUH6 116 aaKnown RBP13.05□□□□□ -0.32
COL4A2-201ENST00000360467 IGLV2-14P01704 120 aa13.04□□□□□ -0.32
COL4A2-201ENST00000360467 IGLV1-47P01700 117 aa13.04□□□□□ -0.32
COL4A2-201ENST00000360467 LYPD6BQ8NI32 183 aa13.04□□□□□ -0.32
COL4A2-201ENST00000360467 SPRY4Q9C004 299 aa13.04□□□□□ -0.32
COL4A2-201ENST00000360467 PCNX1Q96RV3 2341 aa13.04□□□□□ -0.32
COL4A2-201ENST00000360467 CHD3Q12873 2000 aaKnown RBP13.04□□□□□ -0.32
COL4A2-201ENST00000360467 K7EMT4 169 aa13.04□□□□□ -0.32
COL4A2-201ENST00000360467 LOXL1Q08397 574 aaPredicted RBP13.04□□□□□ -0.32
COL4A2-201ENST00000360467 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.04□□□□□ -0.32
COL4A2-201ENST00000360467 C10orf99Q6UWK7 81 aa13.03□□□□□ -0.32
COL4A2-201ENST00000360467 LINC00269Q8N2A0 174 aa13.03□□□□□ -0.32
COL4A2-201ENST00000360467 TTTY13Q9BZ97 58 aa13.03□□□□□ -0.32
COL4A2-201ENST00000360467 IGLV2-18A0A075B6J9 118 aa13.03□□□□□ -0.32
COL4A2-201ENST00000360467 PRSS47A8MTI9 375 aa13.03□□□□□ -0.32
COL4A2-201ENST00000360467 H0Y9J4 135 aa13.03□□□□□ -0.32
COL4A2-201ENST00000360467 Q6ZTI0 123 aa13.03□□□□□ -0.32
COL4A2-201ENST00000360467 CDPF1Q6NVV7 123 aa13.03□□□□□ -0.32
COL4A2-201ENST00000360467 CCDC140Q96MF4 163 aa13.03□□□□□ -0.32
COL4A2-201ENST00000360467 Q6YL49 198 aa13.02□□□□□ -0.32
COL4A2-201ENST00000360467 C22orf34Q6ZV56 151 aa13.02□□□□□ -0.32
COL4A2-201ENST00000360467 SPATA25Q9BR10 227 aa13.02□□□□□ -0.32
COL4A2-201ENST00000360467 C14orf132Q9NPU4 83 aa13.02□□□□□ -0.32
COL4A2-201ENST00000360467 NDUFB1O75438 58 aa13.02□□□□□ -0.32
COL4A2-201ENST00000360467 MED13Q9UHV7 2174 aa13.02□□□□□ -0.33
COL4A2-201ENST00000360467 A4D1N5 150 aa13.02□□□□□ -0.33
COL4A2-201ENST00000360467 FAM222AQ5U5X8 452 aa13.02□□□□□ -0.33
COL4A2-201ENST00000360467 CRYGDP07320 174 aa13.01□□□□□ -0.33
COL4A2-201ENST00000360467 FAM167A-AS1Q96KT0 104 aa13.01□□□□□ -0.33
COL4A2-201ENST00000360467 MRPL52Q86TS9 123 aaKnown RBP13.01□□□□□ -0.33
COL4A2-201ENST00000360467 CLEC2BQ92478 149 aa13.01□□□□□ -0.33
COL4A2-201ENST00000360467 WFDC9Q8NEX5 89 aa13.01□□□□□ -0.33
COL4A2-201ENST00000360467 A0A0J9YX75 114 aa13.01□□□□□ -0.33
COL4A2-201ENST00000360467 NUPR1O60356 82 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms