RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 DYNC2H1Q8NCM8 4307 aaKnown RBP11.23□□□□□ -0.61
FDPS-201ENST00000356657 TRAV26-1A0A087WT03 109 aa11.22□□□□□ -0.61
FDPS-201ENST00000356657 TRBV6-4A0A1B0GX49 114 aa11.22□□□□□ -0.61
FDPS-201ENST00000356657 IGHV3-53P01767 116 aa11.22□□□□□ -0.61
FDPS-201ENST00000356657 GATA1P15976 413 aaPredicted RBP11.22□□□□□ -0.61
FDPS-201ENST00000356657 UFSP1Q6NVU6 142 aa11.22□□□□□ -0.61
FDPS-201ENST00000356657 A0A1B0GUT8 65 aa11.21□□□□□ -0.61
FDPS-201ENST00000356657 SMIM27A0A1W2PRY6 76 aa11.21□□□□□ -0.61
FDPS-201ENST00000356657 CRYBA4P53673 196 aa11.21□□□□□ -0.61
FDPS-201ENST00000356657 RHOHQ15669 191 aa11.21□□□□□ -0.61
FDPS-201ENST00000356657 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.61
FDPS-201ENST00000356657 A0A1B0GW15 77 aa11.2□□□□□ -0.62
FDPS-201ENST00000356657 PAX4O43316 350 aa11.2□□□□□ -0.62
FDPS-201ENST00000356657 CRYGDP07320 174 aa11.2□□□□□ -0.62
FDPS-201ENST00000356657 NTF3P20783 257 aa11.2□□□□□ -0.62
FDPS-201ENST00000356657 RNF212Q495C1 297 aa11.2□□□□□ -0.62
FDPS-201ENST00000356657 PRADC1Q9BSG0 188 aa11.2□□□□□ -0.62
FDPS-201ENST00000356657 CTDSP1Q9GZU7 261 aa11.2□□□□□ -0.62
FDPS-201ENST00000356657 APLNQ9ULZ1 77 aa11.2□□□□□ -0.62
FDPS-201ENST00000356657 RHEBQ15382 184 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 TWIST1Q15672 202 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 FAM74A4Q5TZK3 123 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 SH2D6Q7Z4S9 175 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 RAB4BP61018 213 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 RIGQ13278 110 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 NUP35Q8NFH5 326 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 PGLYRP4Q96LB8 373 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 IMMP2LQ96T52 175 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 DPH3P1Q9H4G8 78 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 TMEM242Q9NWH2 141 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 ICOSQ9Y6W8 199 aa11.19□□□□□ -0.62
FDPS-201ENST00000356657 MUC21A0A0G2JKD1 596 aa11.18□□□□□ -0.62
FDPS-201ENST00000356657 TRBV10-1A0A0K0K1A3 114 aa11.18□□□□□ -0.62
FDPS-201ENST00000356657 MUC21A0A140T8X8 626 aa11.18□□□□□ -0.62
FDPS-201ENST00000356657 S100A8P05109 93 aa11.18□□□□□ -0.62
FDPS-201ENST00000356657 MRPL23Q16540 153 aaKnown RBP11.18□□□□□ -0.62
FDPS-201ENST00000356657 SVBPQ8N300 66 aa11.18□□□□□ -0.62
FDPS-201ENST00000356657 SLC25A29Q8N8R3 303 aa11.18□□□□□ -0.62
FDPS-201ENST00000356657 FRZBQ92765 325 aa11.18□□□□□ -0.62
FDPS-201ENST00000356657 VSIG2Q96IQ7 327 aa11.18□□□□□ -0.62
FDPS-201ENST00000356657 JPT2Q9H910 190 aa11.18□□□□□ -0.62
FDPS-201ENST00000356657 A0A087WWC5 75 aa11.17□□□□□ -0.62
FDPS-201ENST00000356657 A0A087WWL8 130 aa11.17□□□□□ -0.62
FDPS-201ENST00000356657 K7EQD1 137 aa11.17□□□□□ -0.62
FDPS-201ENST00000356657 P0DMU3 169 aa11.17□□□□□ -0.62
FDPS-201ENST00000356657 FAM231AP0DMU4 169 aa11.17□□□□□ -0.62
FDPS-201ENST00000356657 FAM231CP0DMU5 169 aa11.17□□□□□ -0.62
FDPS-201ENST00000356657 C14orf178Q8N769 122 aaPredicted RBP11.17□□□□□ -0.62
FDPS-201ENST00000356657 SAMD10Q9BYL1 202 aa11.17□□□□□ -0.62
FDPS-201ENST00000356657 KIF25-AS1Q9Y6Z4 181 aa11.17□□□□□ -0.62
FDPS-201ENST00000356657 A0A0J9YY99 117 aa11.16□□□□□ -0.62
FDPS-201ENST00000356657 H7C1H1 209 aa11.16□□□□□ -0.62
FDPS-201ENST00000356657 ZNF56Q15929 161 aa11.16□□□□□ -0.62
FDPS-201ENST00000356657 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
FDPS-201ENST00000356657 IGHV3-73A0A0B4J1V6 119 aa11.15□□□□□ -0.62
FDPS-201ENST00000356657 SNAPINO95295 136 aa11.15□□□□□ -0.62
FDPS-201ENST00000356657 NUDT3O95989 172 aa11.15□□□□□ -0.62
FDPS-201ENST00000356657 SSTP61278 116 aa11.15□□□□□ -0.62
FDPS-201ENST00000356657 LGALS9CQ6DKI2 356 aa11.15□□□□□ -0.62
FDPS-201ENST00000356657 CLRN3Q8NCR9 226 aa11.15□□□□□ -0.62
FDPS-201ENST00000356657 MSRB1Q9NZV6 116 aa11.15□□□□□ -0.62
FDPS-201ENST00000356657 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
FDPS-201ENST00000356657 APOC3P02656 99 aa11.14□□□□□ -0.63
FDPS-201ENST00000356657 GYPEP15421 78 aa11.14□□□□□ -0.63
FDPS-201ENST00000356657 EVI2AP22794 236 aa11.14□□□□□ -0.63
FDPS-201ENST00000356657 SRIP30626 198 aa11.14□□□□□ -0.63
FDPS-201ENST00000356657 FAM3BP58499 235 aaPredicted RBP11.14□□□□□ -0.63
FDPS-201ENST00000356657 KCNIP4Q6PIL6 250 aa11.14□□□□□ -0.63
FDPS-201ENST00000356657 TMEM191AQ9H0A3 160 aa11.14□□□□□ -0.63
FDPS-201ENST00000356657 PLECQ15149 4684 aaKnown RBP11.14□□□□□ -0.63
FDPS-201ENST00000356657 RYR3Q15413 4870 aa11.14□□□□□ -0.63
FDPS-201ENST00000356657 A0A096LPF7 62 aa11.13□□□□□ -0.63
FDPS-201ENST00000356657 LCE6AA0A183 80 aa11.13□□□□□ -0.63
FDPS-201ENST00000356657 LINC00315P59091 139 aa11.13□□□□□ -0.63
FDPS-201ENST00000356657 NEGR1Q7Z3B1 354 aa11.13□□□□□ -0.63
FDPS-201ENST00000356657 F5H697 171 aa11.12□□□□□ -0.63
FDPS-201ENST00000356657 CCL18P55774 89 aa11.12□□□□□ -0.63
FDPS-201ENST00000356657 HBBP68871 147 aa11.12□□□□□ -0.63
FDPS-201ENST00000356657 BTF3L4Q96K17 158 aa11.12□□□□□ -0.63
FDPS-201ENST00000356657 C7orf77A4D0Y5 90 aa11.12□□□□□ -0.63
FDPS-201ENST00000356657 S100PP25815 95 aa11.12□□□□□ -0.63
FDPS-201ENST00000356657 TIRAPP58753 221 aa11.12□□□□□ -0.63
FDPS-201ENST00000356657 RPL36AP83881 106 aaKnown RBP11.12□□□□□ -0.63
FDPS-201ENST00000356657 LINC00476Q8WZB0 136 aa11.12□□□□□ -0.63
FDPS-201ENST00000356657 RPL36ALQ969Q0 106 aaKnown RBP11.12□□□□□ -0.63
FDPS-201ENST00000356657 MGPP08493 103 aa11.11□□□□□ -0.63
FDPS-201ENST00000356657 RASL11AQ6T310 242 aa11.11□□□□□ -0.63
FDPS-201ENST00000356657 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.11□□□□□ -0.63
FDPS-201ENST00000356657 TRBV7-3A0A075B6L6 115 aa11.1□□□□□ -0.63
FDPS-201ENST00000356657 A0A1B0GXF2 115 aa11.1□□□□□ -0.63
FDPS-201ENST00000356657 Q6ZSN1 163 aa11.1□□□□□ -0.63
FDPS-201ENST00000356657 DNAJC30Q96LL9 226 aa11.1□□□□□ -0.63
FDPS-201ENST00000356657 LYSTQ99698 3801 aa11.1□□□□□ -0.63
FDPS-201ENST00000356657 RPS10P5Q9NQ39 176 aa11.1□□□□□ -0.63
FDPS-201ENST00000356657 M0QY20 66 aa11.09□□□□□ -0.63
FDPS-201ENST00000356657 LINC00694P0DN24 101 aa11.09□□□□□ -0.63
FDPS-201ENST00000356657 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
FDPS-201ENST00000356657 PPP1R17O96001 155 aa11.08□□□□□ -0.64
FDPS-201ENST00000356657 SUMO4Q6EEV6 95 aa11.08□□□□□ -0.64
FDPS-201ENST00000356657 UBE2DNLQ8IWF7 75 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms