RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 RPL30P62888 115 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 GNG3P63215 75 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 CIRBPQ14011 172 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 LY6EQ16553 131 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 SLC36A1Q7Z2H8 476 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 SLC35E3Q7Z769 313 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 ATOH7Q8N100 152 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 TTC9CQ8N5M4 171 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 OR11H2Q8NH07 326 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 COMMD5Q9GZQ3 224 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 SPANXCQ9NY87 97 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 OR5AC2Q9NZP5 309 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 HS3ST2Q9Y278 367 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 KNL1Q8NG31 2342 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 FLNCQ14315 2725 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 DOCK6Q96HP0 2047 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 DNAH11Q96DT5 4516 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 USP9YO00507 2555 aaPredicted RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 IGKV2D-24A0A075B6R9 120 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 TRAV1-2A0A0B4J238 106 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C9orf170A2RU37 121 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 A8MWV9 139 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 RER1O15258 196 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 SFT2D2O95562 160 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 ATP6V0CP27449 155 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 SRIP30626 198 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 GLRXP35754 106 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 DCDP81605 110 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 SLC38A11Q08AI6 406 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 CCSMST1Q4G0I0 132 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 OCIAD2Q56VL3 154 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 PSMG4Q5JS54 123 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C9orf153Q5TBE3 101 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C2orf91Q6ZV80 131 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 DEFB128Q7Z7B8 93 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 LRRC18Q8N456 261 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 MRPL30Q8TCC3 161 aaKnown RBP0.93□□□□□ -2.26
BRCA1-202ENST00000354071 FGF13Q92913 245 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 OR8B2Q96RD0 313 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 C2orf88Q9BSF0 95 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 LINC00470Q9BZP3 86 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM167BQ9NRX6 74 aa0.93□□□□□ -2.26
BRCA1-202ENST00000354071 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.92□□□□□ -2.262e-7■■■■■ 43.6
BRCA1-202ENST00000354071 KIAA2026Q5HYC2 2103 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 MYH9P35579 1960 aaKnown RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 IGHV3OR15-7A0A075B7D8 119 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TRAV30A0A087WSZ9 112 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TMSB15BA0A087X1C1 80 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TLCD2A6NGC4 264 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 GGTLC3B5MD39 225 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 SYNGR2O43760 224 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 CFDP00746 253 aaPredicted RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TNFP01375 233 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 LGALS3P17931 250 aaKnown RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF137PP52743 207 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TBPL1P62380 186 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 EIF4EBP1Q13541 118 aaPredicted RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF345Q14585 488 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 RASL11AQ6T310 242 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 C20orf196Q8IYI0 205 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 H1FOOQ8IZA3 346 aaPredicted RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 LSM10Q969L4 123 aaKnown RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 MRPS24Q96EL2 167 aaKnown RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 PRELID3AQ96N28 172 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 SPANXDQ9BXN6 97 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 FBXL12Q9NXK8 326 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TAS2R4Q9NYW5 299 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 DNAJC13O75165 2243 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 CACNA1CQ13936 2221 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 SPTBN2O15020 2390 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 CACNA1EQ15878 2313 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 GCC2Q8IWJ2 1684 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 MYH11P35749 1972 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TCHHQ07283 1943 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TRAV5A0A0B4J249 113 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TRAV21A0A0B4J279 112 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 A0A0G2JMM0 328 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 A0A1W2PPB8 328 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 GRIFINA4D1Z8 144 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF815PA8K554 130 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 A8MU10 97 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 KIR3DP1A8MWS1 328 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 C9JCJ5 164 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 C15orf65H3BRN8 121 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TRACP01848 142 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 CISD3P0C7P0 127 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 BCL2P10415 239 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 GPX2P18283 190 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 HLA-DMBP28068 263 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 DYNLT3P51808 116 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 SEC11AP67812 179 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 IL15RAQ13261 267 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 CDK5R1Q15078 307 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 XAF1Q6GPH4 301 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 OR4X2Q8NGF9 303 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 SLC25A40Q8TBP6 338 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 IGF2BP2-AS1Q96M15 143 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 UPK3BQ9BT76 320 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 AICDAQ9GZX7 198 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms