RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 IGHV4-30-2A0A087WSY4 118 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 IGLC6P0CF74 106 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 SUMO4Q6EEV6 95 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 RARRES3Q9UL19 164 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 X6R8D5 127 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 LINC00694P0DN24 101 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 IGLL1P15814 213 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 M0R381 172 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 PRR15LQ9BU68 103 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 PSMB8P28062 276 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 PROK1P58294 105 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 LYPD2Q6UXB3 125 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 CEND1Q8N111 149 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 K7ERS5 55 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 Q6ZSV7 163 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 TIMM17AQ99595 171 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 AJUBAQ96IF1 538 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 IGHV5-10-1A0A0J9YXX1 117 aa2.81□□□□□ -1.96
SYNE1-201ENST00000341594 SS18L1O75177 396 aaPredicted RBP2.81□□□□□ -1.96
SYNE1-201ENST00000341594 A0A0J9YX75 114 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 CRPP02741 224 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 ZNF329Q86UD4 541 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 IGLV2-23P01705 113 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 MED14OSP0DP75 135 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 LINC00311Q8N616 119 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 FAM110DQ8TAY7 271 aaPredicted RBP2.8□□□□□ -1.96
SYNE1-201ENST00000341594 SBSPONQ8IVN8 264 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 C4orf26Q17RF5 130 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 DLL3Q9NYJ7 618 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 RMI2Q96E14 147 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 CXCL6P80162 114 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 LY6G5BQ8NDX9 201 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 PLEKHB2Q96CS7 222 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 LEPROTO15243 131 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 LINC01620Q4KN68 170 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 TACC2O95359 2948 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 IGKV1-27A0A075B6S5 117 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 LAGE3Q14657 143 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 EBLN2Q6P2I7 272 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 PEX7O00628 323 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 NPPCP23582 126 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 TMEM75Q8N9X5 138 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 ITPR2Q14571 2701 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 NOTCH1P46531 2555 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 CEMP1Q6PRD7 247 aaPredicted RBP2.8□□□□□ -1.96
SYNE1-201ENST00000341594 CLPSL2Q6UWE3 100 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 COL6A5A8TX70 2615 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 IGKV1-9A0A0C4DH69 117 aa2.8□□□□□ -1.96
SYNE1-201ENST00000341594 TRGV11A0A075B6L2 103 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 Q8TAT8 98 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 PHLDA3Q9Y5J5 127 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 TCF15Q12870 199 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 SS18Q15532 418 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 MP68P56378 58 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 DEFB121Q5J5C9 76 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 LYZL1Q6UWQ5 148 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 PRCDQ00LT1 54 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 THAP8Q8NA92 274 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 TEP1Q99973 2627 aaKnown RBP2.79□□□□□ -1.96
SYNE1-201ENST00000341594 TREML4Q6UXN2 200 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 CCL3L1P16619 93 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 CD164Q04900 197 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 SLC25A29Q8N8R3 303 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 FOXS1O43638 330 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 PAX8Q06710 450 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 FLVCR1-AS1Q8TAF5 88 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.79□□□□□ -1.96
SYNE1-201ENST00000341594 A6NED7 52 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 ZNF726P1Q15940 193 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 PRR20EP86478 221 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 PRR20CP86479 221 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 PRR20DP86480 221 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 PRR20BP86481 221 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 PRR20AP86496 221 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 SCRG1O75711 98 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 PVRIGQ6DKI7 326 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 PPP1R32Q7Z5V6 425 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 FANCD2OSQ96PS1 177 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 DEFB124Q8NES8 71 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 CDK2AP2O75956 126 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 NDUFA11Q86Y39 141 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 A0A0G2JNJ9 132 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 SLC50A1Q9BRV3 221 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 Q9UFV3 132 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 GFRALQ6UXV0 394 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 SPTY2D1-AS1A0A0U1RR47 76 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 ERC2-IT1O76042 136 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 CHKB-CPT1BH3BT56 60 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 GRNP28799 593 aaKnown RBP2.79□□□□□ -1.96
SYNE1-201ENST00000341594 H0YGX0 51 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 HAMPP81172 84 aa2.79□□□□□ -1.96
SYNE1-201ENST00000341594 TRBV10-3A0A0K0K1G6 114 aa2.78□□□□□ -1.96
SYNE1-201ENST00000341594 NPBQ8NG41 125 aa2.78□□□□□ -1.96
SYNE1-201ENST00000341594 LINC00158P58513 81 aa2.78□□□□□ -1.96
SYNE1-201ENST00000341594 C14orf178Q8N769 122 aaPredicted RBP2.78□□□□□ -1.96
SYNE1-201ENST00000341594 SDHAF1A6NFY7 115 aa2.78□□□□□ -1.96
SYNE1-201ENST00000341594 F8VRH5 84 aa2.78□□□□□ -1.96
SYNE1-201ENST00000341594 ZNF134P52741 427 aa2.78□□□□□ -1.96
SYNE1-201ENST00000341594 IGKV1-12A0A0C4DH73 117 aa2.78□□□□□ -1.96
SYNE1-201ENST00000341594 IGKV1D-12P01611 117 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms