RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 NDUFA7O95182 113 aa7.59□□□□□ -1.19
COL4A6-201ENST00000334504 CXCL5P42830 114 aa7.59□□□□□ -1.19
COL4A6-201ENST00000334504 MIAQ16674 131 aa7.59□□□□□ -1.19
COL4A6-201ENST00000334504 FGF23Q9GZV9 251 aaPredicted RBP7.59□□□□□ -1.19
COL4A6-201ENST00000334504 ABCA4P78363 2273 aa7.59□□□□□ -1.19
COL4A6-201ENST00000334504 GATA3P23771 443 aa7.59□□□□□ -1.2
COL4A6-201ENST00000334504 SEM1Q6ZVN7 128 aa7.59□□□□□ -1.2
COL4A6-201ENST00000334504 FAM167A-AS1Q96KT0 104 aa7.59□□□□□ -1.2
COL4A6-201ENST00000334504 MYO7BQ6PIF6 2116 aa7.59□□□□□ -1.2
COL4A6-201ENST00000334504 PRAC2D3DTV9 90 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 SCXQ7RTU7 201 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 LRCOL1A6NCL2 159 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 TEX22C9J3V5 150 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 RITA1Q96K30 269 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 TNRC6BQ9UPQ9 1833 aaKnown RBP7.58□□□□□ -1.2
COL4A6-201ENST00000334504 M0QXV9 152 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 IGKV4-1P06312 121 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 TNRC6AQ8NDV7 1962 aaKnown RBP7.58□□□□□ -1.2
COL4A6-201ENST00000334504 H3BUA1 57 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 BPY2O14599 106 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 HOXB4P17483 251 aaPredicted RBP7.58□□□□□ -1.2
COL4A6-201ENST00000334504 CTRLP40313 264 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 PROK2Q9HC23 129 aa7.58□□□□□ -1.2
COL4A6-201ENST00000334504 TICRRQ7Z2Z1 1910 aa7.57□□□□□ -1.2
COL4A6-201ENST00000334504 POLEQ07864 2286 aa7.57□□□□□ -1.2
COL4A6-201ENST00000334504 GREB1LQ9C091 1923 aaPredicted RBP7.57□□□□□ -1.2
COL4A6-201ENST00000334504 LTBP1Q14766 1721 aa7.57□□□□□ -1.2
COL4A6-201ENST00000334504 DOCK7Q96N67 2140 aa7.57□□□□□ -1.2
COL4A6-201ENST00000334504 PDE6GP18545 87 aa7.57□□□□□ -1.2
COL4A6-201ENST00000334504 HIST2H2BDQ6DRA6 164 aa7.57□□□□□ -1.2
COL4A6-201ENST00000334504 SDK2Q58EX2 2172 aa7.57□□□□□ -1.2
COL4A6-201ENST00000334504 K7EIM0 57 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 HEATR1Q9H583 2144 aaKnown RBP7.56□□□□□ -1.2
COL4A6-201ENST00000334504 A0A0J9YXY3 114 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 Q6ZS92 163 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 C16orf74Q96GX8 76 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 NDUFA1O15239 70 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 NRGNQ92686 78 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 DOCK6Q96HP0 2047 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 ELANEP08246 267 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 LRRC75A-AS1Q8N1F1 130 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 COX7BP24311 80 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 UBE2AP49459 152 aa7.56□□□□□ -1.2
COL4A6-201ENST00000334504 ESM1Q9NQ30 184 aa7.55□□□□□ -1.2
COL4A6-201ENST00000334504 GTF3C1Q12789 2109 aa7.55□□□□□ -1.2
COL4A6-201ENST00000334504 IGLV1-44P01699 117 aa7.55□□□□□ -1.2
COL4A6-201ENST00000334504 DEFB136Q30KP8 78 aa7.55□□□□□ -1.2
COL4A6-201ENST00000334504 DIDO1Q9BTC0 2240 aaKnown RBP7.55□□□□□ -1.2
COL4A6-201ENST00000334504 NCOR1O75376 2440 aa7.55□□□□□ -1.2
COL4A6-201ENST00000334504 IGKV1-17P01599 117 aa7.55□□□□□ -1.2
COL4A6-201ENST00000334504 PIK3CD-AS1Q5SR53 167 aa7.55□□□□□ -1.2
COL4A6-201ENST00000334504 C11orf53Q8IXP5 236 aa7.55□□□□□ -1.2
COL4A6-201ENST00000334504 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
COL4A6-201ENST00000334504 TRBV7-3A0A075B6L6 115 aa7.54□□□□□ -1.2
COL4A6-201ENST00000334504 CEMP1Q6PRD7 247 aaPredicted RBP7.54□□□□□ -1.2
COL4A6-201ENST00000334504 SPTBN1Q01082 2364 aaKnown RBP7.54□□□□□ -1.2
COL4A6-201ENST00000334504 SLPIP03973 132 aa7.54□□□□□ -1.2
COL4A6-201ENST00000334504 C19orf71A6NCJ1 209 aa7.54□□□□□ -1.2
COL4A6-201ENST00000334504 F8W735 103 aaPredicted RBP7.54□□□□□ -1.2
COL4A6-201ENST00000334504 FANCD2OSQ96PS1 177 aa7.54□□□□□ -1.2
COL4A6-201ENST00000334504 MGAMO43451 1857 aa7.54□□□□□ -1.2
COL4A6-201ENST00000334504 IGLV11-55A0A075B6I3 123 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 MRPS12O15235 138 aaKnown RBP7.53□□□□□ -1.2
COL4A6-201ENST00000334504 CTSGP08311 255 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 SLURP1P55000 103 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 SPRNQ5BIV9 151 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 GDF5OSQ5U4N7 250 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 PRSS33Q8NF86 280 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 C20orf173Q96LM9 149 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 CTSZQ9UBR2 303 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 TIMM17BO60830 172 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 K7ENP7 123 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 LINC00694P0DN24 101 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 MED14OSP0DP75 135 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 CRIPAKQ8N1N5 446 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 TM2D2Q9BX73 214 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 ATP5EP2Q5VTU8 51 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 SPAG11BQ08648 103 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 ARFGEF3Q5TH69 2177 aa7.53□□□□□ -1.2
COL4A6-201ENST00000334504 A0A1B0GXF2 115 aa7.52□□□□□ -1.2
COL4A6-201ENST00000334504 AJUBAQ96IF1 538 aa7.52□□□□□ -1.2
COL4A6-201ENST00000334504 C20orf203Q8NBC4 194 aa7.52□□□□□ -1.21
COL4A6-201ENST00000334504 MDFICQ9P1T7 246 aa7.52□□□□□ -1.21
COL4A6-201ENST00000334504 KAAG1Q9UBP8 84 aa7.52□□□□□ -1.21
COL4A6-201ENST00000334504 USP17L23D6RBM5 183 aa7.52□□□□□ -1.21
COL4A6-201ENST00000334504 ATP5EP56381 51 aaPredicted RBP7.52□□□□□ -1.21
COL4A6-201ENST00000334504 SERP2Q8N6R1 65 aa7.52□□□□□ -1.21
COL4A6-201ENST00000334504 DENND4AQ7Z401 1863 aa7.52□□□□□ -1.21
COL4A6-201ENST00000334504 TRBV6-1A0A0K0K1D8 114 aa7.52□□□□□ -1.21
COL4A6-201ENST00000334504 ZFP36P26651 326 aaKnown RBP7.52□□□□□ -1.21
COL4A6-201ENST00000334504 ZSWIM8A7E2V4 1837 aa7.52□□□□□ -1.21
COL4A6-201ENST00000334504 IGHV7-81A0A0B4J1V7 117 aa7.52□□□□□ -1.21
COL4A6-201ENST00000334504 TRIAP1O43715 76 aa7.52□□□□□ -1.21
COL4A6-201ENST00000334504 IGHV4-59P01825 116 aa7.51□□□□□ -1.21
COL4A6-201ENST00000334504 DEFB1P60022 68 aa7.51□□□□□ -1.21
COL4A6-201ENST00000334504 A6NED7 52 aa7.51□□□□□ -1.21
COL4A6-201ENST00000334504 PLA2G5P39877 138 aa7.51□□□□□ -1.21
COL4A6-201ENST00000334504 CASC2Q6XLA1 102 aa7.51□□□□□ -1.21
COL4A6-201ENST00000334504 C4orf48Q5BLP8 95 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms