RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 CRIP1P50238 77 aa13.2□□□□□ -0.3
TRIM9-201ENST00000298355 SS18Q15532 418 aa13.2□□□□□ -0.3
TRIM9-201ENST00000298355 FAM110AQ9BQ89 295 aa13.2□□□□□ -0.3
TRIM9-201ENST00000298355 CACNA1GO43497 2377 aa13.2□□□□□ -0.3
TRIM9-201ENST00000298355 hADV29S1A0JD25 119 aa13.19□□□□□ -0.3
TRIM9-201ENST00000298355 LINC01619G3V211 115 aa13.19□□□□□ -0.3
TRIM9-201ENST00000298355 H3BUX3 64 aa13.19□□□□□ -0.3
TRIM9-201ENST00000298355 Q6Q795 121 aa13.19□□□□□ -0.3
TRIM9-201ENST00000298355 C9orf47Q6ZRZ4 202 aa13.19□□□□□ -0.3
TRIM9-201ENST00000298355 PRSS33Q8NF86 280 aa13.19□□□□□ -0.3
TRIM9-201ENST00000298355 TRBV7-3A0A075B6L6 115 aa13.19□□□□□ -0.3
TRIM9-201ENST00000298355 IGHV1-69P01742 117 aa13.19□□□□□ -0.3
TRIM9-201ENST00000298355 IGHV3-33P01772 117 aa13.19□□□□□ -0.3
TRIM9-201ENST00000298355 IGHG2P01859 326 aa13.19□□□□□ -0.3
TRIM9-201ENST00000298355 FREM1Q5H8C1 2179 aa13.18□□□□□ -0.3
TRIM9-201ENST00000298355 MED12LQ86YW9 2145 aa13.18□□□□□ -0.3
TRIM9-201ENST00000298355 MED13Q9UHV7 2174 aa13.18□□□□□ -0.3
TRIM9-201ENST00000298355 DEFB131AP59861 70 aa13.18□□□□□ -0.3
TRIM9-201ENST00000298355 MALRD1Q5VYJ5 2156 aa13.18□□□□□ -0.3
TRIM9-201ENST00000298355 BRD3OSQ6XYD6 125 aa13.18□□□□□ -0.3
TRIM9-201ENST00000298355 C1orf229Q6ZS94 237 aaPredicted RBP13.18□□□□□ -0.3
TRIM9-201ENST00000298355 IGHV3-30-3P0DP02 117 aa13.17□□□□□ -0.3
TRIM9-201ENST00000298355 RNF185Q96GF1 192 aa13.17□□□□□ -0.3
TRIM9-201ENST00000298355 IMUPQ9GZP8 106 aa13.17□□□□□ -0.3
TRIM9-201ENST00000298355 MED14OSP0DP75 135 aa13.17□□□□□ -0.3
TRIM9-201ENST00000298355 A0A0J9YXY3 114 aa13.17□□□□□ -0.3
TRIM9-201ENST00000298355 NXPH4O95158 308 aa13.17□□□□□ -0.3
TRIM9-201ENST00000298355 KIAA1549Q9HCM3 1950 aa13.16□□□□□ -0.3
TRIM9-201ENST00000298355 TMEM131Q92545 1883 aa13.16□□□□□ -0.3
TRIM9-201ENST00000298355 IGHV1-58A0A0C4DH39 117 aa13.16□□□□□ -0.3
TRIM9-201ENST00000298355 TRBV30A0A0K0K1B3 111 aa13.16□□□□□ -0.3
TRIM9-201ENST00000298355 MIAQ16674 131 aa13.16□□□□□ -0.3
TRIM9-201ENST00000298355 UBE2E2Q96LR5 201 aa13.16□□□□□ -0.3
TRIM9-201ENST00000298355 LRRC75A-AS1Q8N1F1 130 aa13.16□□□□□ -0.3
TRIM9-201ENST00000298355 IGHV7-4-1A0A0J9YVY3 117 aa13.16□□□□□ -0.3
TRIM9-201ENST00000298355 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
TRIM9-201ENST00000298355 TNCP24821 2201 aa13.16□□□□□ -0.3
TRIM9-201ENST00000298355 TRIAP1O43715 76 aa13.15□□□□□ -0.3
TRIM9-201ENST00000298355 BRK1Q8WUW1 75 aa13.15□□□□□ -0.3
TRIM9-201ENST00000298355 NUP210LQ5VU65 1888 aa13.15□□□□□ -0.3
TRIM9-201ENST00000298355 IGLV2-11P01706 119 aa13.15□□□□□ -0.3
TRIM9-201ENST00000298355 CGB3P0DN86 165 aa13.15□□□□□ -0.3
TRIM9-201ENST00000298355 CGB7P0DN87 165 aa13.15□□□□□ -0.3
TRIM9-201ENST00000298355 WT1P19544 449 aaPredicted RBP13.15□□□□□ -0.3
TRIM9-201ENST00000298355 NPBQ8NG41 125 aa13.15□□□□□ -0.3
TRIM9-201ENST00000298355 SND1-IT1Q9HBX3 110 aa13.15□□□□□ -0.3
TRIM9-201ENST00000298355 PCDH15Q96QU1 1955 aa13.15□□□□□ -0.3
TRIM9-201ENST00000298355 CREBBPQ92793 2442 aa13.14□□□□□ -0.31
TRIM9-201ENST00000298355 CENPVL3A0A0U1RRI6 287 aa13.14□□□□□ -0.31
TRIM9-201ENST00000298355 LINC00694P0DN24 101 aa13.14□□□□□ -0.31
TRIM9-201ENST00000298355 OPRPNQ99935 248 aaPredicted RBP13.14□□□□□ -0.31
TRIM9-201ENST00000298355 DYSFO75923 2080 aa13.14□□□□□ -0.31
TRIM9-201ENST00000298355 DAZAP2Q15038 168 aaPredicted RBP13.13□□□□□ -0.31
TRIM9-201ENST00000298355 HHLA3Q9XRX5 114 aa13.13□□□□□ -0.31
TRIM9-201ENST00000298355 IGHV3-30P01768 117 aa13.13□□□□□ -0.31
TRIM9-201ENST00000298355 IGHV3-30-5P0DP03 117 aa13.13□□□□□ -0.31
TRIM9-201ENST00000298355 NFE4Q86UQ8 179 aa13.13□□□□□ -0.31
TRIM9-201ENST00000298355 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
TRIM9-201ENST00000298355 COX7A2LO14548 114 aa13.12□□□□□ -0.31
TRIM9-201ENST00000298355 DAZ2Q13117 558 aaKnown RBP13.12□□□□□ -0.31
TRIM9-201ENST00000298355 DAZ4Q86SG3 579 aaKnown RBP13.12□□□□□ -0.31
TRIM9-201ENST00000298355 DAZ3Q9NR90 486 aaKnown RBP13.12□□□□□ -0.31
TRIM9-201ENST00000298355 A0A1W2PRX2 142 aa13.12□□□□□ -0.31
TRIM9-201ENST00000298355 TMEM61Q8N0U2 210 aa13.12□□□□□ -0.31
TRIM9-201ENST00000298355 C20orf203Q8NBC4 194 aa13.12□□□□□ -0.31
TRIM9-201ENST00000298355 NCKAP5O14513 1909 aa13.12□□□□□ -0.31
TRIM9-201ENST00000298355 PSCAO43653 123 aa13.12□□□□□ -0.31
TRIM9-201ENST00000298355 TNRC6BQ9UPQ9 1833 aaKnown RBP13.11□□□□□ -0.31
TRIM9-201ENST00000298355 NBASA2RRP1 2371 aa13.11□□□□□ -0.31
TRIM9-201ENST00000298355 Q9HAA7 133 aa13.11□□□□□ -0.31
TRIM9-201ENST00000298355 C14orf132Q9NPU4 83 aa13.11□□□□□ -0.31
TRIM9-201ENST00000298355 LECT2O14960 151 aa13.1□□□□□ -0.31
TRIM9-201ENST00000298355 COX7CP15954 63 aa13.1□□□□□ -0.31
TRIM9-201ENST00000298355 PRR30Q53SZ7 412 aaPredicted RBP13.1□□□□□ -0.31
TRIM9-201ENST00000298355 JMJD7-PLA2G4BH0Y9G9 81 aa13.1□□□□□ -0.31
TRIM9-201ENST00000298355 SMIM9A6NGZ8 99 aa13.09□□□□□ -0.31
TRIM9-201ENST00000298355 IGHV7-81A0A0B4J1V7 117 aa13.09□□□□□ -0.31
TRIM9-201ENST00000298355 FAM236DA0A1B0GTK5 79 aa13.09□□□□□ -0.31
TRIM9-201ENST00000298355 FAM236CP0DP71 79 aa13.09□□□□□ -0.31
TRIM9-201ENST00000298355 C20orf197Q8N268 126 aa13.09□□□□□ -0.31
TRIM9-201ENST00000298355 MDFICQ9P1T7 246 aa13.09□□□□□ -0.31
TRIM9-201ENST00000298355 SPTAN1Q13813 2472 aaKnown RBP13.09□□□□□ -0.31
TRIM9-201ENST00000298355 XCL2Q9UBD3 114 aa13.08□□□□□ -0.31
TRIM9-201ENST00000298355 LINC00574Q9H8X3 128 aa13.08□□□□□ -0.32
TRIM9-201ENST00000298355 TRAV23DV6A0A075B6W5 121 aa13.08□□□□□ -0.32
TRIM9-201ENST00000298355 VSIG2Q96IQ7 327 aa13.08□□□□□ -0.32
TRIM9-201ENST00000298355 PKIGQ9Y2B9 76 aa13.08□□□□□ -0.32
TRIM9-201ENST00000298355 TMEM223A0PJW6 202 aa13.07□□□□□ -0.32
TRIM9-201ENST00000298355 NBL1P41271 181 aa13.07□□□□□ -0.32
TRIM9-201ENST00000298355 RUSC1-AS1Q66K80 236 aa13.07□□□□□ -0.32
TRIM9-201ENST00000298355 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
TRIM9-201ENST00000298355 IGLV1-47P01700 117 aa13.07□□□□□ -0.32
TRIM9-201ENST00000298355 SHISA2Q6UWI4 295 aa13.06□□□□□ -0.32
TRIM9-201ENST00000298355 PLXNB1O43157 2135 aa13.06□□□□□ -0.32
TRIM9-201ENST00000298355 FANCD2OSQ96PS1 177 aa13.06□□□□□ -0.32
TRIM9-201ENST00000298355 FAM215AQ9Y5M1 114 aa13.06□□□□□ -0.32
TRIM9-201ENST00000298355 SERP2Q8N6R1 65 aa13.05□□□□□ -0.32
TRIM9-201ENST00000298355 COL6A6A6NMZ7 2263 aa13.05□□□□□ -0.32
TRIM9-201ENST00000298355 LTBP2Q14767 1821 aa13.05□□□□□ -0.32
TRIM9-201ENST00000298355 CDIP1Q9H305 208 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms