RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 FAM19A4Q96LR4 140 aa12.8□□□□□ -0.36
SPG7-201ENST00000268704 SPATA25Q9BR10 227 aa12.8□□□□□ -0.36
SPG7-201ENST00000268704 PKD1L2Q7Z442 2459 aa12.8□□□□□ -0.36
SPG7-201ENST00000268704 NDUFA4O00483 81 aa12.8□□□□□ -0.36
SPG7-201ENST00000268704 TSPEAR-AS2P59090 65 aa12.8□□□□□ -0.36
SPG7-201ENST00000268704 PF4V1P10720 104 aa12.79□□□□□ -0.36
SPG7-201ENST00000268704 PSMB2P49721 201 aa12.79□□□□□ -0.36
SPG7-201ENST00000268704 RHPN1-AS1Q9BWJ2 59 aa12.79□□□□□ -0.36
SPG7-201ENST00000268704 DOPEY2Q9Y3R5 2298 aa12.79□□□□□ -0.36
SPG7-201ENST00000268704 KIF25-AS1Q9Y6Z4 181 aa12.79□□□□□ -0.36
SPG7-201ENST00000268704 F5H697 171 aa12.78□□□□□ -0.36
SPG7-201ENST00000268704 SUMO4Q6EEV6 95 aa12.78□□□□□ -0.36
SPG7-201ENST00000268704 NFE4Q86UQ8 179 aa12.78□□□□□ -0.36
SPG7-201ENST00000268704 SCGB1A1P11684 91 aa12.78□□□□□ -0.36
SPG7-201ENST00000268704 XGP55808 180 aa12.78□□□□□ -0.36
SPG7-201ENST00000268704 BLCAPP62952 87 aa12.78□□□□□ -0.36
SPG7-201ENST00000268704 FAM74A4Q5TZK3 123 aa12.78□□□□□ -0.36
SPG7-201ENST00000268704 EPG5Q9HCE0 2579 aa12.78□□□□□ -0.36
SPG7-201ENST00000268704 UBE2D1P51668 147 aa12.77□□□□□ -0.36
SPG7-201ENST00000268704 USP24Q9UPU5 2620 aa12.77□□□□□ -0.36
SPG7-201ENST00000268704 IGHV4-38-2P0DP08 117 aa12.77□□□□□ -0.37
SPG7-201ENST00000268704 CFAP126Q5VTH2 177 aa12.77□□□□□ -0.37
SPG7-201ENST00000268704 ITPR1Q14643 2758 aa12.77□□□□□ -0.37
SPG7-201ENST00000268704 TRAV12-3A0A0B4J271 114 aa12.77□□□□□ -0.37
SPG7-201ENST00000268704 IGIPA6NJ69 53 aa12.77□□□□□ -0.37
SPG7-201ENST00000268704 UCNP55089 124 aa12.77□□□□□ -0.37
SPG7-201ENST00000268704 TMEM170BQ5T4T1 132 aa12.77□□□□□ -0.37
SPG7-201ENST00000268704 CD7P09564 240 aa12.76□□□□□ -0.37
SPG7-201ENST00000268704 OPRPNQ99935 248 aaPredicted RBP12.76□□□□□ -0.37
SPG7-201ENST00000268704 A0A0J9YY99 117 aa12.76□□□□□ -0.37
SPG7-201ENST00000268704 IGKV3-20P01619 116 aa12.76□□□□□ -0.37
SPG7-201ENST00000268704 CSPG4Q6UVK1 2322 aa12.76□□□□□ -0.37
SPG7-201ENST00000268704 DLX4Q92988 240 aaPredicted RBP12.76□□□□□ -0.37
SPG7-201ENST00000268704 IGHV1-69DA0A0B4J2H0 117 aa12.75□□□□□ -0.37
SPG7-201ENST00000268704 IGHV1-69P01742 117 aa12.75□□□□□ -0.37
SPG7-201ENST00000268704 ZNRF2Q8NHG8 242 aa12.75□□□□□ -0.37
SPG7-201ENST00000268704 KIR2DL4Q99706 377 aa12.75□□□□□ -0.37
SPG7-201ENST00000268704 CDIP1Q9H305 208 aa12.75□□□□□ -0.37
SPG7-201ENST00000268704 A6NJY4 79 aa12.75□□□□□ -0.37
SPG7-201ENST00000268704 C19orf84I3L1E1 186 aa12.75□□□□□ -0.37
SPG7-201ENST00000268704 FAM159AQ6UWV7 190 aa12.75□□□□□ -0.37
SPG7-201ENST00000268704 ZNF256Q9Y2P7 627 aaPredicted RBP12.75□□□□□ -0.37
SPG7-201ENST00000268704 H3BUX3 64 aa12.75□□□□□ -0.37
SPG7-201ENST00000268704 SDHAF1A6NFY7 115 aa12.74□□□□□ -0.37
SPG7-201ENST00000268704 MED14OSP0DP75 135 aa12.74□□□□□ -0.37
SPG7-201ENST00000268704 POLR2KP53803 58 aaKnown RBP12.74□□□□□ -0.37
SPG7-201ENST00000268704 FOXI1Q12951 378 aa12.74□□□□□ -0.37
SPG7-201ENST00000268704 APRG1Q8IVJ8 170 aa12.74□□□□□ -0.37
SPG7-201ENST00000268704 TRAV12-2A0A075B6T6 113 aa12.74□□□□□ -0.37
SPG7-201ENST00000268704 B5MCH6 92 aa12.74□□□□□ -0.37
SPG7-201ENST00000268704 PMVKQ15126 192 aa12.74□□□□□ -0.37
SPG7-201ENST00000268704 C1QTNF4Q9BXJ3 329 aa12.74□□□□□ -0.37
SPG7-201ENST00000268704 IGHV4-39P01824 125 aa12.73□□□□□ -0.37
SPG7-201ENST00000268704 TMEM95Q3KNT9 176 aa12.73□□□□□ -0.37
SPG7-201ENST00000268704 NDUFA11Q86Y39 141 aa12.73□□□□□ -0.37
SPG7-201ENST00000268704 NXPH4O95158 308 aa12.73□□□□□ -0.37
SPG7-201ENST00000268704 CRIP2P52943 208 aaPredicted RBP12.73□□□□□ -0.37
SPG7-201ENST00000268704 IGHV3-64A0A075B6Q5 118 aa12.73□□□□□ -0.37
SPG7-201ENST00000268704 KLLNB2CW77 178 aa12.72□□□□□ -0.37
SPG7-201ENST00000268704 LY6DQ14210 128 aa12.72□□□□□ -0.37
SPG7-201ENST00000268704 POM121L12Q8N7R1 296 aa12.72□□□□□ -0.37
SPG7-201ENST00000268704 IGHV4-61A0A0C4DH41 118 aa12.72□□□□□ -0.37
SPG7-201ENST00000268704 TCL1BO95988 128 aa12.72□□□□□ -0.37
SPG7-201ENST00000268704 PPP1R17O96001 155 aa12.72□□□□□ -0.37
SPG7-201ENST00000268704 MDFICQ9P1T7 246 aa12.72□□□□□ -0.37
SPG7-201ENST00000268704 IGHV4OR15-8A0A075B7B6 117 aa12.71□□□□□ -0.37
SPG7-201ENST00000268704 A0A087WW49 117 aa12.71□□□□□ -0.37
SPG7-201ENST00000268704 CFC1BP0CG36 223 aa12.71□□□□□ -0.37
SPG7-201ENST00000268704 CFC1P0CG37 223 aa12.71□□□□□ -0.37
SPG7-201ENST00000268704 UBE2D3P61077 147 aa12.71□□□□□ -0.37
SPG7-201ENST00000268704 HERVK_113P61574 105 aa12.71□□□□□ -0.37
SPG7-201ENST00000268704 UBE2D2P62837 147 aa12.71□□□□□ -0.37
SPG7-201ENST00000268704 DAZ1Q9NQZ3 744 aaKnown RBP12.71□□□□□ -0.37
SPG7-201ENST00000268704 IGHV3-30P01768 117 aa12.7□□□□□ -0.38
SPG7-201ENST00000268704 IGHV3-30-5P0DP03 117 aa12.7□□□□□ -0.38
SPG7-201ENST00000268704 TCTEX1D4Q5JR98 221 aa12.7□□□□□ -0.38
SPG7-201ENST00000268704 IGHG2P01859 326 aa12.7□□□□□ -0.38
SPG7-201ENST00000268704 ZNF688P0C7X2 276 aa12.7□□□□□ -0.38
SPG7-201ENST00000268704 TRBV20-1A0A075B6N2 111 aa12.7□□□□□ -0.38
SPG7-201ENST00000268704 VCYO14598 125 aa12.7□□□□□ -0.38
SPG7-201ENST00000268704 ZNF56Q15929 161 aa12.7□□□□□ -0.38
SPG7-201ENST00000268704 Q6ZUT4 128 aa12.7□□□□□ -0.38
SPG7-201ENST00000268704 PRORYQ9H606 182 aa12.7□□□□□ -0.38
SPG7-201ENST00000268704 USMG5Q96IX5 58 aa12.69□□□□□ -0.38
SPG7-201ENST00000268704 AMELXQ99217 191 aa12.69□□□□□ -0.38
SPG7-201ENST00000268704 ANAPC13Q9BS18 74 aa12.69□□□□□ -0.38
SPG7-201ENST00000268704 DCANP1Q8TF63 244 aa12.69□□□□□ -0.38
SPG7-201ENST00000268704 C10orf99Q6UWK7 81 aa12.68□□□□□ -0.38
SPG7-201ENST00000268704 CARD19Q96LW7 228 aa12.68□□□□□ -0.38
SPG7-201ENST00000268704 ZNF876PQ49A33 203 aa12.68□□□□□ -0.38
SPG7-201ENST00000268704 ZNF580Q9UK33 172 aa12.68□□□□□ -0.38
SPG7-201ENST00000268704 J3QQQ9 107 aa12.68□□□□□ -0.38
SPG7-201ENST00000268704 SLC25A29Q8N8R3 303 aa12.68□□□□□ -0.38
SPG7-201ENST00000268704 RAX2Q96IS3 184 aa12.68□□□□□ -0.38
SPG7-201ENST00000268704 TIMM17AQ99595 171 aa12.67□□□□□ -0.38
SPG7-201ENST00000268704 H7C2G1 150 aa12.67□□□□□ -0.38
SPG7-201ENST00000268704 UTP20O75691 2785 aaKnown RBP12.66□□□□□ -0.38
SPG7-201ENST00000268704 EIF4EBP3O60516 100 aaPredicted RBP12.66□□□□□ -0.38
SPG7-201ENST00000268704 TMEM141Q96I45 108 aa12.66□□□□□ -0.38
SPG7-201ENST00000268704 ZFYVE26Q68DK2 2539 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms