RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 TRBV12-3P01733 135 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 HIST2H2BCQ6DN03 193 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 HIST2H2BDQ6DRA6 164 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
CPT1A-201ENST00000265641 NOTCH4Q99466 2003 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 IGKV2D-26A0A0A0MRZ7 120 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 PFN2P35080 140 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 DAZ2Q13117 558 aaKnown RBP8.29□□□□□ -1.08
CPT1A-201ENST00000265641 DAZ4Q86SG3 579 aaKnown RBP8.29□□□□□ -1.08
CPT1A-201ENST00000265641 DAZ3Q9NR90 486 aaKnown RBP8.29□□□□□ -1.08
CPT1A-201ENST00000265641 MSRB1Q9NZV6 116 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 IGKV1OR2-108A0A075B7D4 117 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 USP17L23D6RBM5 183 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 FUSP35637 526 aaKnown RBP eCLIP8.29□□□□□ -1.08
CPT1A-201ENST00000265641 TMEM105Q8N8V8 129 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 MED13LQ71F56 2210 aa8.29□□□□□ -1.08
CPT1A-201ENST00000265641 TICRRQ7Z2Z1 1910 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 HOXD3P31249 432 aaPredicted RBP8.28□□□□□ -1.08
CPT1A-201ENST00000265641 KAAG1Q9UBP8 84 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 TRAV12-2A0A075B6T6 113 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 LST1O00453 97 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 IGLV1-44P01699 117 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 ATP5J2P56134 94 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 MAPKAPK5-AS1Q8N8E1 139 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 PRO0628Q9UI54 55 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 WFDC9Q8NEX5 89 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 ABCA4P78363 2273 aa8.28□□□□□ -1.08
CPT1A-201ENST00000265641 LOXP28300 417 aaPredicted RBP8.27□□□□□ -1.08
CPT1A-201ENST00000265641 INSL3P51460 131 aa8.27□□□□□ -1.08
CPT1A-201ENST00000265641 TRIAP1O43715 76 aa8.27□□□□□ -1.09
CPT1A-201ENST00000265641 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.27□□□□□ -1.091e-5■■■■□ 21.5
CPT1A-201ENST00000265641 MED13Q9UHV7 2174 aa8.27□□□□□ -1.09
CPT1A-201ENST00000265641 IGKV1-17P01599 117 aa8.27□□□□□ -1.09
CPT1A-201ENST00000265641 MRPL36Q9P0J6 103 aaKnown RBP8.27□□□□□ -1.09
CPT1A-201ENST00000265641 IGHV3-30-3P0DP02 117 aa8.27□□□□□ -1.09
CPT1A-201ENST00000265641 C7orf69Q9H7B7 122 aa8.27□□□□□ -1.09
CPT1A-201ENST00000265641 GPR179Q6PRD1 2367 aa8.27□□□□□ -1.09
CPT1A-201ENST00000265641 LY6DQ14210 128 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 IGLV3-9A0A075B6K5 115 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 A0A0J9YX75 114 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 FOXE3Q13461 319 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 HRCT1Q6UXD1 115 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 A0A0U1RQV1 116 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 NXPH4O95158 308 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 MYCNOSP40205 109 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 UBE2D3P61077 147 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 UBE2D2P62837 147 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 DIAPH2-AS1Q14236 149 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 SDIM1Q6ZPB5 146 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 Q6ZPA2 131 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 FREM1Q5H8C1 2179 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 TRAV23DV6A0A075B6W5 121 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 LECT2O14960 151 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 FAM222AQ5U5X8 452 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 C20orf203Q8NBC4 194 aa8.26□□□□□ -1.09
CPT1A-201ENST00000265641 TEX22C9J3V5 150 aa8.25□□□□□ -1.09
CPT1A-201ENST00000265641 CRIP3Q6Q6R5 217 aa8.25□□□□□ -1.09
CPT1A-201ENST00000265641 TMEM223A0PJW6 202 aa8.25□□□□□ -1.09
CPT1A-201ENST00000265641 NREPQ16612 68 aa8.25□□□□□ -1.09
CPT1A-201ENST00000265641 TNCP24821 2201 aa8.25□□□□□ -1.09
CPT1A-201ENST00000265641 K7EIM0 57 aa8.25□□□□□ -1.09
CPT1A-201ENST00000265641 BLCAPP62952 87 aa8.25□□□□□ -1.09
CPT1A-201ENST00000265641 EIF4EBP1Q13541 118 aaPredicted RBP8.25□□□□□ -1.09
CPT1A-201ENST00000265641 SP5Q6BEB4 398 aaPredicted RBP8.25□□□□□ -1.09
CPT1A-201ENST00000265641 TRBV7-7A0A0K0K1E9 115 aa8.24□□□□□ -1.09
CPT1A-201ENST00000265641 LINC00322Q6ZN03 302 aaPredicted RBP8.24□□□□□ -1.09
CPT1A-201ENST00000265641 COX7B2Q8TF08 81 aa8.24□□□□□ -1.09
CPT1A-201ENST00000265641 PLA2G5P39877 138 aa8.24□□□□□ -1.09
CPT1A-201ENST00000265641 NFE4Q86UQ8 179 aa8.24□□□□□ -1.09
CPT1A-201ENST00000265641 ZNRF2Q8NHG8 242 aa8.24□□□□□ -1.09
CPT1A-201ENST00000265641 C14orf132Q9NPU4 83 aa8.24□□□□□ -1.09
CPT1A-201ENST00000265641 MSRB2Q9Y3D2 182 aa8.24□□□□□ -1.09
CPT1A-201ENST00000265641 RIF1Q5UIP0 2472 aaKnown RBP8.24□□□□□ -1.09
CPT1A-201ENST00000265641 IGHV7-4-1A0A0J9YVY3 117 aa8.24□□□□□ -1.09
CPT1A-201ENST00000265641 NPBQ8NG41 125 aa8.24□□□□□ -1.09
CPT1A-201ENST00000265641 ATP6V0E1O15342 81 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 UBE2D1P51668 147 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 SPRY4Q9C004 299 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 PRORYQ9H606 182 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 IGLV11-55A0A075B6I3 123 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 ZMAT4Q9H898 229 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 PROP1O75360 226 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 LHBP01229 141 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 COL8A2P25067 703 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 NSUN5P1Q3KNT7 163 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 TMEM263Q8WUH6 116 aaKnown RBP8.23□□□□□ -1.09
CPT1A-201ENST00000265641 CDIP1Q9H305 208 aa8.23□□□□□ -1.09
CPT1A-201ENST00000265641 IGKV1D-37A0A075B6S9 117 aa8.22□□□□□ -1.09
CPT1A-201ENST00000265641 OVOL3O00110 214 aa8.22□□□□□ -1.09
CPT1A-201ENST00000265641 GNRH2O43555 120 aa8.22□□□□□ -1.09
CPT1A-201ENST00000265641 WT1P19544 449 aaPredicted RBP8.21□□□□□ -1.09
CPT1A-201ENST00000265641 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.09
CPT1A-201ENST00000265641 SPINK13Q1W4C9 94 aa8.21□□□□□ -1.09
CPT1A-201ENST00000265641 EP400Q96L91 3159 aa8.21□□□□□ -1.1
CPT1A-201ENST00000265641 TRAV7A0A075B6U4 112 aa8.21□□□□□ -1.1
CPT1A-201ENST00000265641 PLXNB1O43157 2135 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms