RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 MAPK1IP1LQ8NDC0 245 aa14.7□□□□□ -0.06
NEIL3-201ENST00000264596 MDFICQ9P1T7 246 aa14.7□□□□□ -0.06
NEIL3-201ENST00000264596 ZNF815PA8K554 130 aa14.7□□□□□ -0.06
NEIL3-201ENST00000264596 POLR2KP53803 58 aaKnown RBP14.7□□□□□ -0.06
NEIL3-201ENST00000264596 CD300EQ496F6 205 aaPredicted RBP14.7□□□□□ -0.06
NEIL3-201ENST00000264596 SIGMAR1Q99720 223 aa14.7□□□□□ -0.06
NEIL3-201ENST00000264596 DUX5Q96PT3 197 aa14.69□□□□□ -0.06
NEIL3-201ENST00000264596 GTSF1LQ9H1H1 148 aa14.69□□□□□ -0.06
NEIL3-201ENST00000264596 IGHV3-16A0A0C4DH30 117 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 SDHAF1A6NFY7 115 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 SYNJ2BPP57105 145 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 SNRPD3P62318 126 aaKnown RBP14.68□□□□□ -0.06
NEIL3-201ENST00000264596 FOXI2Q6ZQN5 318 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 KIR2DL4Q99706 377 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 A0A0J9YX75 114 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 C11orf86A6NJI1 115 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 VCYO14598 125 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 SPINK13Q1W4C9 94 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 IGIPA6NJ69 53 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 GATA3P23771 443 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 PLEKHB2Q96CS7 222 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 ZNF256Q9Y2P7 627 aaPredicted RBP14.67□□□□□ -0.06
NEIL3-201ENST00000264596 DOPEY1Q5JWR5 2465 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 IGLV4-69A0A075B6H9 119 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 RPL32P62910 135 aaKnown RBP14.67□□□□□ -0.06
NEIL3-201ENST00000264596 ZNF56Q15929 161 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 SCGB1D4Q6XE38 83 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 Q8N1Y9 231 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 KLHL30-AS1Q8NEE0 82 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 ZNF580Q9UK33 172 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 USP9XQ93008 2570 aaPredicted RBP14.67□□□□□ -0.06
NEIL3-201ENST00000264596 LINC01356Q8N9X3 169 aa14.66□□□□□ -0.06
NEIL3-201ENST00000264596 C9orf85Q96MD7 179 aa14.66□□□□□ -0.06
NEIL3-201ENST00000264596 LINC01619G3V211 115 aa14.66□□□□□ -0.06
NEIL3-201ENST00000264596 K7EQG2 157 aa14.66□□□□□ -0.06
NEIL3-201ENST00000264596 SMAGPQ0VAQ4 97 aa14.66□□□□□ -0.06
NEIL3-201ENST00000264596 SPANXB1Q9NS25 103 aaPredicted RBP14.66□□□□□ -0.06
NEIL3-201ENST00000264596 PMVKQ15126 192 aa14.65□□□□□ -0.06
NEIL3-201ENST00000264596 TSSC4Q9Y5U2 329 aaPredicted RBP14.65□□□□□ -0.06
NEIL3-201ENST00000264596 GAGE12HA6NDE8 117 aa14.65□□□□□ -0.06
NEIL3-201ENST00000264596 LGALS9O00182 355 aa14.65□□□□□ -0.06
NEIL3-201ENST00000264596 TGFAP01135 160 aa14.65□□□□□ -0.06
NEIL3-201ENST00000264596 RRN3P1Q2M238 152 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 AMTNQ6UX39 209 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 SPATA25Q9BR10 227 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 DOPEY2Q9Y3R5 2298 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 F8W1H4 67 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 H3BMG7 143 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 COX6B1P14854 86 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 DSCR9P59020 149 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 SYT8Q8NBV8 401 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 ODF3Q96PU9 254 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 IGHV1OR15-1A0A075B7D0 117 aa14.63□□□□□ -0.07
NEIL3-201ENST00000264596 MORN3Q6PF18 240 aaPredicted RBP14.63□□□□□ -0.07
NEIL3-201ENST00000264596 TMEM141Q96I45 108 aa14.63□□□□□ -0.07
NEIL3-201ENST00000264596 TRBV27A0A0K0K1C4 114 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 A0A1B0GV72 72 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 SRSF9Q13242 221 aaKnown RBP eCLIP14.62□□□□□ -0.07
NEIL3-201ENST00000264596 SVIPQ8NHG7 77 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 A0A1B0GWB2 263 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 HERVK_113P61574 105 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 WFDC2Q14508 124 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 IGSF10Q6WRI0 2623 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 PIEZO1Q92508 2521 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 J3QR89 54 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 M0QY20 66 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 HOXA3O43365 443 aaPredicted RBP14.61□□□□□ -0.07
NEIL3-201ENST00000264596 TMEM170BQ5T4T1 132 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 TIMM17AQ99595 171 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 TRBV6-5A0A0K0K1A5 114 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 TMEM89A2RUT3 159 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 HOXD3P31249 432 aaPredicted RBP14.61□□□□□ -0.07
NEIL3-201ENST00000264596 PAPPA-AS1Q5QFB9 102 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 MTURNQ8N3F0 131 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 LINC01549A6NIU2 74 aa14.6□□□□□ -0.07
NEIL3-201ENST00000264596 OPRPNQ99935 248 aaPredicted RBP14.6□□□□□ -0.07
NEIL3-201ENST00000264596 SORL1Q92673 2214 aa14.6□□□□□ -0.07
NEIL3-201ENST00000264596 ZNRF2Q8NHG8 242 aa14.6□□□□□ -0.07
NEIL3-201ENST00000264596 ZNF876PQ49A33 203 aa14.59□□□□□ -0.07
NEIL3-201ENST00000264596 PGPEP1Q9NXJ5 209 aa14.59□□□□□ -0.07
NEIL3-201ENST00000264596 HTN1P15515 57 aa14.58□□□□□ -0.07
NEIL3-201ENST00000264596 VPREB3Q9UKI3 123 aa14.58□□□□□ -0.07
NEIL3-201ENST00000264596 ZANQ9Y493 2812 aa14.58□□□□□ -0.08
NEIL3-201ENST00000264596 A0A096LNT2 108 aa14.58□□□□□ -0.08
NEIL3-201ENST00000264596 TSPEAR-AS2P59090 65 aa14.58□□□□□ -0.08
NEIL3-201ENST00000264596 SPAG8Q99932 426 aaPredicted RBP14.58□□□□□ -0.08
NEIL3-201ENST00000264596 TRPT1Q86TN4 253 aaKnown RBP14.57□□□□□ -0.08
NEIL3-201ENST00000264596 MRPL16Q9NX20 251 aaKnown RBP14.57□□□□□ -0.08
NEIL3-201ENST00000264596 ZNF702PQ9H963 129 aa14.57□□□□□ -0.08
NEIL3-201ENST00000264596 BEX4Q9NWD9 120 aaPredicted RBP14.57□□□□□ -0.08
NEIL3-201ENST00000264596 USP9YO00507 2555 aaPredicted RBP14.57□□□□□ -0.08
NEIL3-201ENST00000264596 TMEM238LA0A1B0GVL6 79 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 A6NJY4 79 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 CLUHP3Q96NS8 147 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 ANKRD17O75179 2603 aaKnown RBP14.56□□□□□ -0.08
NEIL3-201ENST00000264596 A0A0J9YY99 117 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 KNCNA6PVL3 124 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 J3QLI3 93 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 DEFB136Q30KP8 78 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 ETDBQ3ZM63 59 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms