RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 LINC01549A6NIU2 74 aa12.74□□□□□ -0.37
SLC52A1-201ENST00000254853 KIR2DL4Q99706 377 aa12.74□□□□□ -0.37
SLC52A1-201ENST00000254853 UBE2D1P51668 147 aa12.73□□□□□ -0.37
SLC52A1-201ENST00000254853 FAM74A4Q5TZK3 123 aa12.73□□□□□ -0.37
SLC52A1-201ENST00000254853 SPAG8Q99932 426 aaPredicted RBP12.73□□□□□ -0.37
SLC52A1-201ENST00000254853 TMEM238LA0A1B0GVL6 79 aa12.73□□□□□ -0.37
SLC52A1-201ENST00000254853 A6NJY4 79 aa12.73□□□□□ -0.37
SLC52A1-201ENST00000254853 HERVK_113P61574 105 aa12.73□□□□□ -0.37
SLC52A1-201ENST00000254853 TMEM141Q96I45 108 aa12.73□□□□□ -0.37
SLC52A1-201ENST00000254853 TRAV12-2A0A075B6T6 113 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 AVPP01185 164 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 IGKV3-20P01619 116 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 MSMBP08118 114 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 ZNF688P0C7X2 276 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 PAPPA-AS1Q5QFB9 102 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 CLEC2AQ6UVW9 174 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 GTSF1LQ9H1H1 148 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 A0A0J9YY99 117 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 LGALS9O00182 355 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 TSPEAR-AS2P59090 65 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 SAMD13Q5VXD3 122 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 TIMM17AQ99595 171 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 MDFICQ9P1T7 246 aa12.72□□□□□ -0.37
SLC52A1-201ENST00000254853 IGHV3-16A0A0C4DH30 117 aa12.71□□□□□ -0.37
SLC52A1-201ENST00000254853 J3QR89 54 aa12.71□□□□□ -0.37
SLC52A1-201ENST00000254853 ATP5J2P56134 94 aa12.71□□□□□ -0.37
SLC52A1-201ENST00000254853 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
SLC52A1-201ENST00000254853 ZNRF2Q8NHG8 242 aa12.71□□□□□ -0.37
SLC52A1-201ENST00000254853 C9orf85Q96MD7 179 aa12.71□□□□□ -0.37
SLC52A1-201ENST00000254853 TRBV27A0A0K0K1C4 114 aa12.71□□□□□ -0.38
SLC52A1-201ENST00000254853 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.38
SLC52A1-201ENST00000254853 TSPAN13O95857 204 aa12.71□□□□□ -0.38
SLC52A1-201ENST00000254853 AZU1P20160 251 aa12.71□□□□□ -0.38
SLC52A1-201ENST00000254853 C10orf99Q6UWK7 81 aa12.71□□□□□ -0.38
SLC52A1-201ENST00000254853 ZNF256Q9Y2P7 627 aaPredicted RBP12.71□□□□□ -0.38
SLC52A1-201ENST00000254853 NCOR2Q9Y618 2525 aa12.71□□□□□ -0.38
SLC52A1-201ENST00000254853 NDUFS8O00217 210 aa12.7□□□□□ -0.38
SLC52A1-201ENST00000254853 INSL3P51460 131 aa12.7□□□□□ -0.38
SLC52A1-201ENST00000254853 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
SLC52A1-201ENST00000254853 SIGMAR1Q99720 223 aa12.7□□□□□ -0.38
SLC52A1-201ENST00000254853 TRBV6-5A0A0K0K1A5 114 aa12.7□□□□□ -0.38
SLC52A1-201ENST00000254853 APOMO95445 188 aa12.7□□□□□ -0.38
SLC52A1-201ENST00000254853 ZNF876PQ49A33 203 aa12.7□□□□□ -0.38
SLC52A1-201ENST00000254853 PSMB8P28062 276 aa12.69□□□□□ -0.38
SLC52A1-201ENST00000254853 PRORYQ9H606 182 aa12.69□□□□□ -0.38
SLC52A1-201ENST00000254853 CHD8Q9HCK8 2581 aa12.69□□□□□ -0.38
SLC52A1-201ENST00000254853 ZNF56Q15929 161 aa12.69□□□□□ -0.38
SLC52A1-201ENST00000254853 Q8N1Y9 231 aa12.69□□□□□ -0.38
SLC52A1-201ENST00000254853 CACNA1AO00555 2505 aa12.68□□□□□ -0.38
SLC52A1-201ENST00000254853 LOC107984156A0A0G2JMH3 177 aa12.68□□□□□ -0.38
SLC52A1-201ENST00000254853 A0A0J9YX75 114 aa12.68□□□□□ -0.38
SLC52A1-201ENST00000254853 M0QY20 66 aa12.68□□□□□ -0.38
SLC52A1-201ENST00000254853 ARL17AQ8IVW1 177 aa12.68□□□□□ -0.38
SLC52A1-201ENST00000254853 DLX4Q92988 240 aaPredicted RBP12.68□□□□□ -0.38
SLC52A1-201ENST00000254853 OPRPNQ99935 248 aaPredicted RBP12.68□□□□□ -0.38
SLC52A1-201ENST00000254853 PSMB2P49721 201 aa12.67□□□□□ -0.38
SLC52A1-201ENST00000254853 SMCPP49901 116 aaPredicted RBP12.67□□□□□ -0.38
SLC52A1-201ENST00000254853 SMAGPQ0VAQ4 97 aa12.67□□□□□ -0.38
SLC52A1-201ENST00000254853 CFAP126Q5VTH2 177 aa12.67□□□□□ -0.38
SLC52A1-201ENST00000254853 NDUFA11Q86Y39 141 aa12.67□□□□□ -0.38
SLC52A1-201ENST00000254853 ODF3Q96PU9 254 aa12.67□□□□□ -0.38
SLC52A1-201ENST00000254853 IGHV3-30P01768 117 aa12.66□□□□□ -0.38
SLC52A1-201ENST00000254853 IGHV4-59P01825 116 aa12.66□□□□□ -0.38
SLC52A1-201ENST00000254853 IGHV3-30-5P0DP03 117 aa12.66□□□□□ -0.38
SLC52A1-201ENST00000254853 SPINK13Q1W4C9 94 aa12.66□□□□□ -0.38
SLC52A1-201ENST00000254853 SYT8Q8NBV8 401 aa12.66□□□□□ -0.38
SLC52A1-201ENST00000254853 AMELXQ99217 191 aa12.66□□□□□ -0.38
SLC52A1-201ENST00000254853 SPATA25Q9BR10 227 aa12.66□□□□□ -0.38
SLC52A1-201ENST00000254853 IGHV1OR15-1A0A075B7D0 117 aa12.65□□□□□ -0.38
SLC52A1-201ENST00000254853 K7EQG2 157 aa12.65□□□□□ -0.38
SLC52A1-201ENST00000254853 UBE2D3P61077 147 aa12.65□□□□□ -0.38
SLC52A1-201ENST00000254853 SNRPD3P62318 126 aaKnown RBP12.65□□□□□ -0.38
SLC52A1-201ENST00000254853 UBE2D2P62837 147 aa12.65□□□□□ -0.38
SLC52A1-201ENST00000254853 SLC25A29Q8N8R3 303 aa12.65□□□□□ -0.38
SLC52A1-201ENST00000254853 ITPR1Q14643 2758 aa12.65□□□□□ -0.38
SLC52A1-201ENST00000254853 J3QQQ9 107 aa12.65□□□□□ -0.38
SLC52A1-201ENST00000254853 ZNF580Q9UK33 172 aa12.65□□□□□ -0.38
SLC52A1-201ENST00000254853 P0DMU3 169 aa12.64□□□□□ -0.39
SLC52A1-201ENST00000254853 FAM231AP0DMU4 169 aa12.64□□□□□ -0.39
SLC52A1-201ENST00000254853 FAM231CP0DMU5 169 aa12.64□□□□□ -0.39
SLC52A1-201ENST00000254853 NSUN5P1Q3KNT7 163 aa12.64□□□□□ -0.39
SLC52A1-201ENST00000254853 COL12A1Q99715 3063 aa12.64□□□□□ -0.39
SLC52A1-201ENST00000254853 CFC1BP0CG36 223 aa12.64□□□□□ -0.39
SLC52A1-201ENST00000254853 CFC1P0CG37 223 aa12.64□□□□□ -0.39
SLC52A1-201ENST00000254853 RHOHQ15669 191 aa12.64□□□□□ -0.39
SLC52A1-201ENST00000254853 DEFB112Q30KQ8 113 aa12.64□□□□□ -0.39
SLC52A1-201ENST00000254853 TRPT1Q86TN4 253 aaKnown RBP12.64□□□□□ -0.39
SLC52A1-201ENST00000254853 B4DSR2 109 aa12.63□□□□□ -0.39
SLC52A1-201ENST00000254853 LGALS3P17931 250 aaKnown RBP12.63□□□□□ -0.39
SLC52A1-201ENST00000254853 NFE4Q86UQ8 179 aa12.63□□□□□ -0.39
SLC52A1-201ENST00000254853 SYNJ2BPP57105 145 aa12.63□□□□□ -0.39
SLC52A1-201ENST00000254853 C1QTNF4Q9BXJ3 329 aa12.63□□□□□ -0.39
SLC52A1-201ENST00000254853 SCGB1A1P11684 91 aa12.62□□□□□ -0.39
SLC52A1-201ENST00000254853 FOXI1Q12951 378 aa12.62□□□□□ -0.39
SLC52A1-201ENST00000254853 ZNF418Q8TF45 676 aaPredicted RBP12.62□□□□□ -0.39
SLC52A1-201ENST00000254853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.62□□□□□ -0.39
SLC52A1-201ENST00000254853 TMEM223A0PJW6 202 aa12.61□□□□□ -0.39
SLC52A1-201ENST00000254853 C20orf203Q8NBC4 194 aa12.61□□□□□ -0.39
SLC52A1-201ENST00000254853 DUX5Q96PT3 197 aa12.61□□□□□ -0.39
SLC52A1-201ENST00000254853 SPG11Q96JI7 2443 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms