RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 SLAQ13239 276 aa13.79□□□□□ -0.2
HOXA6-201ENST00000222728 HIGD1CA8MV81 97 aa13.78□□□□□ -0.2
HOXA6-201ENST00000222728 CIDEAO60543 219 aa13.78□□□□□ -0.2
HOXA6-201ENST00000222728 NTF3P20783 257 aa13.78□□□□□ -0.2
HOXA6-201ENST00000222728 PNRC1Q12796 327 aaPredicted RBP13.78□□□□□ -0.2
HOXA6-201ENST00000222728 ZFP2Q6ZN57 461 aa13.78□□□□□ -0.2
HOXA6-201ENST00000222728 C14orf178Q8N769 122 aaPredicted RBP13.78□□□□□ -0.2
HOXA6-201ENST00000222728 SLC25A29Q8N8R3 303 aa13.78□□□□□ -0.2
HOXA6-201ENST00000222728 H3BNG1 76 aa13.77□□□□□ -0.21
HOXA6-201ENST00000222728 RHODO00212 210 aa13.77□□□□□ -0.21
HOXA6-201ENST00000222728 GYPEP15421 78 aa13.77□□□□□ -0.21
HOXA6-201ENST00000222728 TWIST1Q15672 202 aa13.77□□□□□ -0.21
HOXA6-201ENST00000222728 RNF212Q495C1 297 aa13.77□□□□□ -0.21
HOXA6-201ENST00000222728 LINC00476Q8WZB0 136 aa13.77□□□□□ -0.21
HOXA6-201ENST00000222728 AP1S3Q96PC3 154 aa13.77□□□□□ -0.21
HOXA6-201ENST00000222728 VPS13DQ5THJ4 4388 aa13.76□□□□□ -0.21
HOXA6-201ENST00000222728 A0A096LPF7 62 aa13.76□□□□□ -0.21
HOXA6-201ENST00000222728 LY6G6CO95867 125 aa13.76□□□□□ -0.21
HOXA6-201ENST00000222728 SEC11CQ9BY50 192 aa13.76□□□□□ -0.21
HOXA6-201ENST00000222728 CNFNQ9BYD5 112 aa13.76□□□□□ -0.21
HOXA6-201ENST00000222728 GFRA4Q9GZZ7 299 aa13.76□□□□□ -0.21
HOXA6-201ENST00000222728 ICOSQ9Y6W8 199 aa13.76□□□□□ -0.21
HOXA6-201ENST00000222728 SACSQ9NZJ4 4579 aa13.76□□□□□ -0.21
HOXA6-201ENST00000222728 KMT2CQ8NEZ4 4911 aaKnown RBP13.75□□□□□ -0.21
HOXA6-201ENST00000222728 LCE6AA0A183 80 aa13.75□□□□□ -0.21
HOXA6-201ENST00000222728 EVI2AP22794 236 aa13.75□□□□□ -0.21
HOXA6-201ENST00000222728 FOXA3P55318 350 aaPredicted RBP13.75□□□□□ -0.21
HOXA6-201ENST00000222728 ZNF56Q15929 161 aa13.75□□□□□ -0.21
HOXA6-201ENST00000222728 WDR73Q6P4I2 378 aa13.75□□□□□ -0.21
HOXA6-201ENST00000222728 KIF25-AS1Q9Y6Z4 181 aa13.75□□□□□ -0.21
HOXA6-201ENST00000222728 TRBV6-4A0A1B0GX49 114 aa13.74□□□□□ -0.21
HOXA6-201ENST00000222728 K7EQD1 137 aa13.74□□□□□ -0.21
HOXA6-201ENST00000222728 MGPP08493 103 aa13.74□□□□□ -0.21
HOXA6-201ENST00000222728 SMIM17P0DL12 118 aa13.74□□□□□ -0.21
HOXA6-201ENST00000222728 RHOHQ15669 191 aa13.74□□□□□ -0.21
HOXA6-201ENST00000222728 NUP35Q8NFH5 326 aa13.74□□□□□ -0.21
HOXA6-201ENST00000222728 Q9UF83 564 aa13.74□□□□□ -0.21
HOXA6-201ENST00000222728 SMIM27A0A1W2PRY6 76 aa13.73□□□□□ -0.21
HOXA6-201ENST00000222728 FAM231BA6NCW3 169 aa13.73□□□□□ -0.21
HOXA6-201ENST00000222728 TRGC1P0CF51 173 aa13.73□□□□□ -0.21
HOXA6-201ENST00000222728 P0DMU3 169 aa13.73□□□□□ -0.21
HOXA6-201ENST00000222728 FAM231AP0DMU4 169 aa13.73□□□□□ -0.21
HOXA6-201ENST00000222728 FAM231CP0DMU5 169 aa13.73□□□□□ -0.21
HOXA6-201ENST00000222728 LGALS9CQ6DKI2 356 aa13.73□□□□□ -0.21
HOXA6-201ENST00000222728 BORCS7Q96B45 105 aa13.73□□□□□ -0.21
HOXA6-201ENST00000222728 PRADC1Q9BSG0 188 aa13.73□□□□□ -0.21
HOXA6-201ENST00000222728 F5H697 171 aa13.72□□□□□ -0.21
HOXA6-201ENST00000222728 MT-ND4LP03901 98 aa13.72□□□□□ -0.21
HOXA6-201ENST00000222728 LINC00315P59091 139 aa13.72□□□□□ -0.21
HOXA6-201ENST00000222728 MRPL23Q16540 153 aaKnown RBP13.72□□□□□ -0.21
HOXA6-201ENST00000222728 C10orf91Q5T1B1 145 aa13.72□□□□□ -0.21
HOXA6-201ENST00000222728 UBE2DNLQ8IWF7 75 aa13.72□□□□□ -0.21
HOXA6-201ENST00000222728 NAT8BQ9UHF3 227 aa13.72□□□□□ -0.21
HOXA6-201ENST00000222728 A0A1B0GUT8 65 aa13.71□□□□□ -0.21
HOXA6-201ENST00000222728 PPP1R2P9O14990 202 aa13.71□□□□□ -0.21
HOXA6-201ENST00000222728 SRIP30626 198 aa13.71□□□□□ -0.21
HOXA6-201ENST00000222728 RAB4BP61018 213 aa13.71□□□□□ -0.21
HOXA6-201ENST00000222728 ESRGQ1W209 222 aa13.7□□□□□ -0.22
HOXA6-201ENST00000222728 ANAPC16Q96DE5 110 aa13.7□□□□□ -0.22
HOXA6-201ENST00000222728 DPH3P1Q9H4G8 78 aa13.7□□□□□ -0.22
HOXA6-201ENST00000222728 CARHSP1Q9Y2V2 147 aaKnown RBP13.7□□□□□ -0.22
HOXA6-201ENST00000222728 DNAH6Q9C0G6 4158 aa13.69□□□□□ -0.22
HOXA6-201ENST00000222728 GAGE12JA6NER3 117 aa13.69□□□□□ -0.22
HOXA6-201ENST00000222728 GAGE1Q13065 139 aa13.69□□□□□ -0.22
HOXA6-201ENST00000222728 GAGE4Q13068 117 aa13.69□□□□□ -0.22
HOXA6-201ENST00000222728 GAGE5Q13069 117 aa13.69□□□□□ -0.22
HOXA6-201ENST00000222728 GAGE13Q4V321 117 aa13.69□□□□□ -0.22
HOXA6-201ENST00000222728 NEGR1Q7Z3B1 354 aa13.69□□□□□ -0.22
HOXA6-201ENST00000222728 SLC7A5P1Q8MH63 180 aa13.69□□□□□ -0.22
HOXA6-201ENST00000222728 LINC00588Q9Y4M8 146 aa13.69□□□□□ -0.22
HOXA6-201ENST00000222728 KMT2AQ03164 3969 aa13.69□□□□□ -0.22
HOXA6-201ENST00000222728 HYDINQ4G0P3 5121 aa13.67□□□□□ -0.22
HOXA6-201ENST00000222728 CCL18P55774 89 aa13.67□□□□□ -0.22
HOXA6-201ENST00000222728 RIGQ13278 110 aa13.67□□□□□ -0.22
HOXA6-201ENST00000222728 SUMO4Q6EEV6 95 aa13.67□□□□□ -0.22
HOXA6-201ENST00000222728 FAM3BP58499 235 aaPredicted RBP13.66□□□□□ -0.22
HOXA6-201ENST00000222728 MRPL54Q6P161 138 aaKnown RBP13.66□□□□□ -0.22
HOXA6-201ENST00000222728 SMIM15Q7Z3B0 74 aa13.66□□□□□ -0.22
HOXA6-201ENST00000222728 LINC00694P0DN24 101 aa13.65□□□□□ -0.22
HOXA6-201ENST00000222728 LYPD5Q6UWN5 251 aa13.65□□□□□ -0.22
HOXA6-201ENST00000222728 ZNRF2Q8NHG8 242 aa13.65□□□□□ -0.22
HOXA6-201ENST00000222728 TRAV26-2A0A0B4J265 109 aa13.64□□□□□ -0.23
HOXA6-201ENST00000222728 APOC3P02656 99 aa13.64□□□□□ -0.23
HOXA6-201ENST00000222728 CAMPP49913 170 aa13.64□□□□□ -0.23
HOXA6-201ENST00000222728 NEXN-AS1Q8NBZ9 246 aa13.64□□□□□ -0.23
HOXA6-201ENST00000222728 CLRN3Q8NCR9 226 aa13.64□□□□□ -0.23
HOXA6-201ENST00000222728 RYR2Q92736 4967 aa13.63□□□□□ -0.23
HOXA6-201ENST00000222728 TRBV10-1A0A0K0K1A3 114 aa13.63□□□□□ -0.23
HOXA6-201ENST00000222728 C7orf77A4D0Y5 90 aa13.63□□□□□ -0.23
HOXA6-201ENST00000222728 M0QY20 66 aa13.63□□□□□ -0.23
HOXA6-201ENST00000222728 ATP6V0E2Q8NHE4 81 aa13.63□□□□□ -0.23
HOXA6-201ENST00000222728 RPL36AP83881 106 aaKnown RBP13.62□□□□□ -0.23
HOXA6-201ENST00000222728 SH2D6Q7Z4S9 175 aa13.62□□□□□ -0.23
HOXA6-201ENST00000222728 RPL36ALQ969Q0 106 aaKnown RBP13.62□□□□□ -0.23
HOXA6-201ENST00000222728 TMEM191AQ9H0A3 160 aa13.62□□□□□ -0.23
HOXA6-201ENST00000222728 MRPS16Q9Y3D3 137 aaKnown RBP13.62□□□□□ -0.23
HOXA6-201ENST00000222728 TRBV7-3A0A075B6L6 115 aa13.61□□□□□ -0.23
HOXA6-201ENST00000222728 AMN1Q8IY45 258 aa13.61□□□□□ -0.23
HOXA6-201ENST00000222728 GATD1Q8NB37 220 aa13.61□□□□□ -0.23
HOXA6-201ENST00000222728 CTDSP1Q9GZU7 261 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms