RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Vmn1r117L7N2C9 307 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Kcnk3O35111 409 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Gsx1P31315 261 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Zfp30Q60585 533 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Ifna12Q80SS5 189 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Ssxb2Q8C5Z3 165 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Tmed4Q8R1V4 227 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr76Q8VFV2 317 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Fam219aQ9D772 157 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 SrpxQ9R0M3 464 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Ighv1-20A0A0A6YX66 117 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Trav3n-3A0A0G2JEM0 114 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Esp15A8R0U8 85 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr613E9PYB4 317 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Gm21994F6T2D2 329 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Cks1bP61025 79 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Vkorc1l1Q6TEK5 176 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr1385Q7TQT1 309 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Tmem212Q8C6V3 187 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Vmn1r235Q8R297 328 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr984Q8VFN1 314 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Mrps16Q9CPX7 135 aaKnown RBP6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 S100a16Q9D708 124 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Ceacam18Q9D871 376 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Tex43Q9D9I1 141 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Cend1Q9JKC6 149 aa6.72□□□□□ -1.33
Trim39-205ENSMUST00000173369 Srrm2Q8BTI8 2703 aaKnown RBP6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 1700025C18RikA2A580 89 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Gm17657E9PWY5 170 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Irf2bp2E9Q1P8 570 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Klrd1O54707 179 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Ube2kP61087 200 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 ShbgP97497 403 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Tmem52bQ0VBF2 186 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Prrc1Q3UPH1 443 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 March1Q6NZQ8 289 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 A730015C16RikQ8C992 119 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Vmn1r62Q8R2C0 300 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Nus1Q99LJ8 297 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Ssbp2Q9CYZ8 361 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Necap2Q9D1J1 266 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Ackr1Q9QUI6 334 aa6.71□□□□□ -1.33
Trim39-205ENSMUST00000173369 Gm28778A0A087WSK7 233 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Olfr1458A0A1L1SSD5 307 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Ovol3D3YYM0 189 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Gm17455G3UW87 128 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Spint5J3KMK8 105 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Gm4778L7N229 365 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Tcf21O35437 179 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Cst7O89098 144 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Slc6a9P28571 692 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 OsmP53347 263 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 F2rl1P55086 399 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Ap1s3Q7TN05 154 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Ifna13Q80SU4 189 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Galnt14Q8BVG5 550 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Olfr1259Q8VEZ1 309 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 H2al3Q9D4U4 128 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Dram1Q9DC58 238 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Timm23Q9WTQ8 209 aa6.71□□□□□ -1.34
Trim39-205ENSMUST00000173369 Zfp972A2AW65 139 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 1500009C09RikD3YYW9 81 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Foxi3E0CZH3 425 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 P01630 113 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Zfp11P10751 647 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Crisp2P16563 243 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Galr1P56479 348 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Olfr736Q8VFT6 312 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Olfr824Q8VFU4 315 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Glo1Q9CPU0 184 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 9330161L09RikQ9D253 136 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Dazap1Q9JII5 406 aaKnown RBP6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Ighv1-7A0A075B5T7 117 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Trav18A0A075B656 109 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Vmn1r138D3YTY2 306 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Gm8693E9PW18 306 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Gm3685J3QPP2 205 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Gm4498K9J7G4 306 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Vmn1r118L7N273 306 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Rpl27aP14115 148 aaKnown RBP6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Acyp2P56375 106 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Cyb5aP56395 134 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Ndufb6Q3UIU2 128 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 GaptQ8CB93 157 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Olfr303Q8VFP0 319 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Olfr1238Q8VG59 315 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Myoz1Q9JK37 296 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Hacd1Q9QY80 281 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 PtprqP0C5E4 2300 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Gm4133K9J7G6 307 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 P01803 113 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 PipP02816 146 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 P04940 107 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 P04941 107 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Ube2e1P52482 193 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 SbsponQ3UPR9 264 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Cd52Q64389 74 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Cd200r5Q8BTP3 270 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Gm26566Q8CAC1 153 aa6.7□□□□□ -1.34
Trim39-205ENSMUST00000173369 Fam241aQ9CZL2 131 aa6.7□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 107.6 ms