Protein–RNA interactions for Protein: Q80SU4

Ifna13, Interferon alpha-13, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna13Q80SU4 Gm25239-201ENSMUST00000174915 86 ntBASIC28.66■■■□□ 2.18
Ifna13Q80SU4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ifna13Q80SU4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ifna13Q80SU4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Ifna13Q80SU4 Psd-208ENSMUST00000224556 2034 ntBASIC26.34■■□□□ 1.81
Ifna13Q80SU4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ifna13Q80SU4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ifna13Q80SU4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ifna13Q80SU4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ifna13Q80SU4 Gm15042-201ENSMUST00000120212 883 ntBASIC25.8■■□□□ 1.72
Ifna13Q80SU4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ifna13Q80SU4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ifna13Q80SU4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ifna13Q80SU4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ifna13Q80SU4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.37■■□□□ 1.65
Ifna13Q80SU4 Gm15045-201ENSMUST00000117359 883 ntBASIC25.3■■□□□ 1.64
Ifna13Q80SU4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ifna13Q80SU4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ifna13Q80SU4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ifna13Q80SU4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ifna13Q80SU4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ifna13Q80SU4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ifna13Q80SU4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.65■■□□□ 1.54
Ifna13Q80SU4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ifna13Q80SU4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ifna13Q80SU4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ifna13Q80SU4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ifna13Q80SU4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ifna13Q80SU4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ifna13Q80SU4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.51■■□□□ 1.51
Ifna13Q80SU4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ifna13Q80SU4 Gm24109-201ENSMUST00000175489 103 ntBASIC24.49■■□□□ 1.51
Ifna13Q80SU4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ifna13Q80SU4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ifna13Q80SU4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ifna13Q80SU4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Ifna13Q80SU4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ifna13Q80SU4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.17■■□□□ 1.46
Ifna13Q80SU4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ifna13Q80SU4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.14■■□□□ 1.45
Ifna13Q80SU4 Gm23366-201ENSMUST00000175022 89 ntBASIC24.1■■□□□ 1.45
Ifna13Q80SU4 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.1■■□□□ 1.45
Ifna13Q80SU4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ifna13Q80SU4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ifna13Q80SU4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ifna13Q80SU4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ifna13Q80SU4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ifna13Q80SU4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ifna13Q80SU4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ifna13Q80SU4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ifna13Q80SU4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ifna13Q80SU4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.64■■□□□ 1.37
Ifna13Q80SU4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ifna13Q80SU4 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.61■■□□□ 1.37
Ifna13Q80SU4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Ifna13Q80SU4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.5■■□□□ 1.35
Ifna13Q80SU4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ifna13Q80SU4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ifna13Q80SU4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ifna13Q80SU4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ifna13Q80SU4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.43■■□□□ 1.34
Ifna13Q80SU4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ifna13Q80SU4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ifna13Q80SU4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ifna13Q80SU4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ifna13Q80SU4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ifna13Q80SU4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ifna13Q80SU4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ifna13Q80SU4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ifna13Q80SU4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ifna13Q80SU4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ifna13Q80SU4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ifna13Q80SU4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.28
Ifna13Q80SU4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ifna13Q80SU4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ifna13Q80SU4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ifna13Q80SU4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ifna13Q80SU4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ifna13Q80SU4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ifna13Q80SU4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.88■■□□□ 1.25
Ifna13Q80SU4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ifna13Q80SU4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ifna13Q80SU4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ifna13Q80SU4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Ifna13Q80SU4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ifna13Q80SU4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ifna13Q80SU4 Gm27325-201ENSMUST00000175467 74 ntBASIC22.72■■□□□ 1.23
Ifna13Q80SU4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Ifna13Q80SU4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ifna13Q80SU4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ifna13Q80SU4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ifna13Q80SU4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ifna13Q80SU4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ifna13Q80SU4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ifna13Q80SU4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ifna13Q80SU4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ifna13Q80SU4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ifna13Q80SU4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ifna13Q80SU4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ifna13Q80SU4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms