Protein–RNA interactions for Protein: Q8R1V4

Tmed4, Transmembrane emp24 domain-containing protein 4, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed4Q8R1V4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Tmed4Q8R1V4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Tmed4Q8R1V4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Tmed4Q8R1V4 Gm25239-201ENSMUST00000174915 86 ntBASIC27.88■■■□□ 2.05
Tmed4Q8R1V4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Tmed4Q8R1V4 Psd-208ENSMUST00000224556 2034 ntBASIC27.65■■■□□ 2.02
Tmed4Q8R1V4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Tmed4Q8R1V4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Tmed4Q8R1V4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Tmed4Q8R1V4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Tmed4Q8R1V4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Tmed4Q8R1V4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tmed4Q8R1V4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tmed4Q8R1V4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Tmed4Q8R1V4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Tmed4Q8R1V4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tmed4Q8R1V4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Tmed4Q8R1V4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.74■■□□□ 1.71
Tmed4Q8R1V4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Tmed4Q8R1V4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Tmed4Q8R1V4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tmed4Q8R1V4 Gm15042-201ENSMUST00000120212 883 ntBASIC25.36■■□□□ 1.65
Tmed4Q8R1V4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tmed4Q8R1V4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Tmed4Q8R1V4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tmed4Q8R1V4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tmed4Q8R1V4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.13■■□□□ 1.61
Tmed4Q8R1V4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tmed4Q8R1V4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tmed4Q8R1V4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.01■■□□□ 1.59
Tmed4Q8R1V4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Tmed4Q8R1V4 Gm15045-201ENSMUST00000117359 883 ntBASIC24.93■■□□□ 1.58
Tmed4Q8R1V4 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.88■■□□□ 1.57
Tmed4Q8R1V4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tmed4Q8R1V4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tmed4Q8R1V4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.85■■□□□ 1.57
Tmed4Q8R1V4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tmed4Q8R1V4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.83■■□□□ 1.57
Tmed4Q8R1V4 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.81■■□□□ 1.56
Tmed4Q8R1V4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Tmed4Q8R1V4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Tmed4Q8R1V4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tmed4Q8R1V4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Tmed4Q8R1V4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tmed4Q8R1V4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Tmed4Q8R1V4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Tmed4Q8R1V4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Tmed4Q8R1V4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tmed4Q8R1V4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
Tmed4Q8R1V4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Tmed4Q8R1V4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Tmed4Q8R1V4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Tmed4Q8R1V4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.42■■□□□ 1.5
Tmed4Q8R1V4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Tmed4Q8R1V4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tmed4Q8R1V4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
Tmed4Q8R1V4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Tmed4Q8R1V4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Tmed4Q8R1V4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tmed4Q8R1V4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Tmed4Q8R1V4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tmed4Q8R1V4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tmed4Q8R1V4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tmed4Q8R1V4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tmed4Q8R1V4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Tmed4Q8R1V4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.97■■□□□ 1.43
Tmed4Q8R1V4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tmed4Q8R1V4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Tmed4Q8R1V4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tmed4Q8R1V4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Tmed4Q8R1V4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tmed4Q8R1V4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tmed4Q8R1V4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Tmed4Q8R1V4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tmed4Q8R1V4 Gm24109-201ENSMUST00000175489 103 ntBASIC23.68■■□□□ 1.38
Tmed4Q8R1V4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Tmed4Q8R1V4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tmed4Q8R1V4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tmed4Q8R1V4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tmed4Q8R1V4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tmed4Q8R1V4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tmed4Q8R1V4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.58■■□□□ 1.36
Tmed4Q8R1V4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tmed4Q8R1V4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tmed4Q8R1V4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tmed4Q8R1V4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tmed4Q8R1V4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.45■■□□□ 1.34
Tmed4Q8R1V4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tmed4Q8R1V4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tmed4Q8R1V4 Gm23366-201ENSMUST00000175022 89 ntBASIC23.43■■□□□ 1.34
Tmed4Q8R1V4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tmed4Q8R1V4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Tmed4Q8R1V4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Tmed4Q8R1V4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Tmed4Q8R1V4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tmed4Q8R1V4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Tmed4Q8R1V4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.34■■□□□ 1.33
Tmed4Q8R1V4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Tmed4Q8R1V4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Tmed4Q8R1V4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms