RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Urb1Q571H0 2274 aaKnown RBP11.86□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Fam3dP97805 223 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Xaf1Q5NBU8 273 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Cd200r5Q8BTP3 270 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Siglec12Q91Y57 467 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Hyls1Q9CXX0 307 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Gm20773A0A0A6YXW2 232 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Gm20807A0A0A6YXX7 232 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Gm20795J3QP49 232 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Gm21440Q3TTD8 232 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Olfr1380Q7TQT5 311 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Gm5148Q8BGG2 154 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Olfr556E9Q549 324 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Cited2O35740 269 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Prss58Q8BW11 241 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Ly6g6eQ8K1T6 166 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Anapc10Q8K2H6 185 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Tmem189Q99LQ7 271 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 H2afb1Q9CQ70 111 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Tcrg-V1P06325 135 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Spred3Q6P6N5 408 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Klk10Q99M20 278 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Myo16Q5DU14 1919 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Smr2O09133 150 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Foxr2Q3UM89 302 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Spcs1Q9D958 161 aa11.85□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Scgb1b11A0A087WQJ0 93 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Prss32E9Q409 334 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Klf2Q60843 354 aaKnown RBP11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 St6galnac6Q9JM95 333 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Suclg1Q9WUM5 346 aaKnown RBP11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Gm21882J3QN86 361 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 A630076J17RikJ3QQ32 107 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Prss41Q920S2 322 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Cnn3Q9DAW9 330 aaKnown RBP11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Dock11A2AF47 2073 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 eef1akmt3D3YWP0 232 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Defa16P50714 93 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Cd200r4Q6XJV4 270 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Loxl2P58022 776 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Asphd1Q2TA57 360 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Defb33Q30KN3 62 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Gm5615Q3UW02 101 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Bsph1Q3UW26 133 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Muc15Q8C6Z1 331 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Cma2Q91VB1 246 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Srd5a2Q99N99 254 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Trav7n-5A0A075B604 112 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Gm6525A0A0A6YW33 106 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Olfr749E9Q438 313 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 BC030500E9Q6W0 185 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Zfp119aQ9JIC0 545 aa11.84□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Cacna1aP97445 2368 aa11.83□□□□□ -0.51
Col1a1-201ENSMUST00000001547 Gm5868Q8BJG1 145 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Olfr498Q8VEW2 330 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Smim8Q9CQQ0 97 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Mfap4Q9D1H9 257 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Prr15Q9D1T5 122 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Ighv6-4A0A0A6YX19 119 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Gm44501A8R0T9 150 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 LfngO09010 378 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Spint3Q3UW09 88 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Spsb4Q8R5B6 273 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 DdtO35215 118 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Sumo3Q9Z172 110 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Trbv12-1A0A0B4J1H0 124 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Olfr918E9PVZ7 325 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Trav6d-4Q5R1I0 115 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Olfr275Q7TS18 319 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Immp2lQ8BPT6 175 aa11.83□□□□□ -0.52
Col1a1-201ENSMUST00000001547 P18532 116 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Defa26Q3L180 93 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Gm21394Q497R7 227 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Slc25a28Q8R0Z5 364 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Cela3bQ9CQ52 269 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Gm45844A0A1B0GRQ2 137 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Spint5J3KMK8 105 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Trav15-1-dv6-1Q5R1D2 117 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Slc35d2Q762D5 326 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 HilpdaQ9JLS0 64 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Ndufa7Q9Z1P6 113 aaKnown RBP11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Ighv9-3A0A0B4J1J5 117 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Vamp8O70404 101 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Mmp23O88676 391 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Trav3-3Q5R1C3 114 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Olfr33Q8VGX7 318 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Klf7Q99JB0 301 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Sdf2l1Q9ESP1 221 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Olfr1337A2ACY8 315 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 1700067P10RikG3X8U2 183 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Rpl36-ps4A0A140T8U4 117 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Gm20873J3QMQ9 232 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Hoxa5P09021 270 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Efna2P52801 209 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Dlx6P70397 175 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 AdmP97297 184 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Oosp2Q4FZG8 168 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 D630044L22RikQ8C701 164 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Olfr975Q8VG91 310 aa11.82□□□□□ -0.52
Col1a1-201ENSMUST00000001547 Gm21900J3QP38 180 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms