RNA–Protein interactions for RNA: ENST00000631619.1

CCNL1-226, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-226ENST00000631619 LCNL1Q6ZST4 164 aa13.63□□□□□ -0.23
CCNL1-226ENST00000631619 C19orf54Q5BKX5 351 aa13.63□□□□□ -0.23
CCNL1-226ENST00000631619 ITLN2Q8WWU7 325 aaPredicted RBP13.62□□□□□ -0.23
CCNL1-226ENST00000631619 TRAV41A0A0B4J266 112 aa13.62□□□□□ -0.23
CCNL1-226ENST00000631619 NFE4Q86UQ8 179 aa13.61□□□□□ -0.23
CCNL1-226ENST00000631619 HIF1ANQ9NWT6 349 aa13.61□□□□□ -0.23
CCNL1-226ENST00000631619 MOB4Q9Y3A3 225 aa13.61□□□□□ -0.23
CCNL1-226ENST00000631619 A6NJY4 79 aa13.61□□□□□ -0.23
CCNL1-226ENST00000631619 LGALS1P09382 135 aaKnown RBP13.6□□□□□ -0.23
CCNL1-226ENST00000631619 Q6ZUT4 128 aa13.6□□□□□ -0.23
CCNL1-226ENST00000631619 GLMPQ8WWB7 406 aa13.6□□□□□ -0.23
CCNL1-226ENST00000631619 IGHV4-39P01824 125 aa13.59□□□□□ -0.23
CCNL1-226ENST00000631619 MT-ATP8P03928 68 aa13.59□□□□□ -0.23
CCNL1-226ENST00000631619 PRR9Q5T870 116 aa13.59□□□□□ -0.23
CCNL1-226ENST00000631619 C16orf92Q96LL3 132 aa13.59□□□□□ -0.23
CCNL1-226ENST00000631619 C20orf173Q96LM9 149 aa13.59□□□□□ -0.23
CCNL1-226ENST00000631619 TRAV26-2A0A0B4J265 109 aa13.59□□□□□ -0.23
CCNL1-226ENST00000631619 FHL3Q13643 280 aa13.59□□□□□ -0.23
CCNL1-226ENST00000631619 BRD3OSQ6XYD6 125 aa13.59□□□□□ -0.23
CCNL1-226ENST00000631619 FAM223BA6NKX1 122 aa13.58□□□□□ -0.23
CCNL1-226ENST00000631619 TRBV12-3P01733 135 aa13.58□□□□□ -0.23
CCNL1-226ENST00000631619 FAM223AQ8IWN6 122 aa13.58□□□□□ -0.23
CCNL1-226ENST00000631619 IGF1P05019 195 aa13.58□□□□□ -0.24
CCNL1-226ENST00000631619 CRIP2P52943 208 aaPredicted RBP13.58□□□□□ -0.24
CCNL1-226ENST00000631619 XGP55808 180 aa13.58□□□□□ -0.24
CCNL1-226ENST00000631619 UNQ9165/PRO28630Q6UXU0 137 aa13.58□□□□□ -0.24
CCNL1-226ENST00000631619 UFC1Q9Y3C8 167 aa13.58□□□□□ -0.24
CCNL1-226ENST00000631619 CACNA1AO00555 2505 aa13.58□□□□□ -0.24
CCNL1-226ENST00000631619 LINC01549A6NIU2 74 aa13.57□□□□□ -0.24
CCNL1-226ENST00000631619 ARL3P36405 182 aa13.57□□□□□ -0.24
CCNL1-226ENST00000631619 GPHB5Q86YW7 130 aa13.57□□□□□ -0.24
CCNL1-226ENST00000631619 TSPAN13O95857 204 aa13.57□□□□□ -0.24
CCNL1-226ENST00000631619 UBE2D1P51668 147 aa13.57□□□□□ -0.24
CCNL1-226ENST00000631619 IGHV4-4A0A075B6R2 117 aa13.56□□□□□ -0.24
CCNL1-226ENST00000631619 IGHV1-69DA0A0B4J2H0 117 aa13.56□□□□□ -0.24
CCNL1-226ENST00000631619 IGHV1-69P01742 117 aa13.56□□□□□ -0.24
CCNL1-226ENST00000631619 PSMB2P49721 201 aa13.56□□□□□ -0.24
CCNL1-226ENST00000631619 PPDPFLQ8WWR9 84 aa13.56□□□□□ -0.24
CCNL1-226ENST00000631619 UBE2D3P61077 147 aa13.56□□□□□ -0.24
CCNL1-226ENST00000631619 UBE2D2P62837 147 aa13.56□□□□□ -0.24
CCNL1-226ENST00000631619 LYRM7Q5U5X0 104 aa13.56□□□□□ -0.24
CCNL1-226ENST00000631619 C9orf139Q6ZV77 190 aa13.56□□□□□ -0.24
CCNL1-226ENST00000631619 SMIM2Q9BVW6 85 aa13.56□□□□□ -0.24
CCNL1-226ENST00000631619 MAP1AP78559 2803 aaPredicted RBP13.55□□□□□ -0.24
CCNL1-226ENST00000631619 H3BVH4 76 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 SPANXN1Q5VSR9 72 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 TEN1Q86WV5 123 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 NEXN-AS1Q8NBZ9 246 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 VCX2Q9H322 139 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 ERG28Q9UKR5 140 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 COL12A1Q99715 3063 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 LOC107984156A0A0G2JMH3 177 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 SLC25A16P16260 332 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 ARL17AQ8IVW1 177 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 SCGB3A1Q96QR1 104 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 PRADC1Q9BSG0 188 aa13.55□□□□□ -0.24
CCNL1-226ENST00000631619 ORMDL2Q53FV1 153 aa13.54□□□□□ -0.24
CCNL1-226ENST00000631619 J3KRW8 73 aa13.54□□□□□ -0.24
CCNL1-226ENST00000631619 TOMM6Q96B49 74 aa13.54□□□□□ -0.24
CCNL1-226ENST00000631619 CARD19Q96LW7 228 aa13.54□□□□□ -0.24
CCNL1-226ENST00000631619 SPG11Q96JI7 2443 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 IGHV4-61A0A0C4DH41 118 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 ZNF815PA8K554 130 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 GNLYP22749 145 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 DEFB1P60022 68 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 ZFAND2AQ8N6M9 145 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 LENEPQ9Y5L5 61 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 SOCS3O14543 225 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 SCGB1D4Q6XE38 83 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 ZFP2Q6ZN57 461 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 PTH2Q96A98 100 aa13.53□□□□□ -0.24
CCNL1-226ENST00000631619 NDUFA4O00483 81 aa13.52□□□□□ -0.24
CCNL1-226ENST00000631619 IGHV4-38-2P0DP08 117 aa13.52□□□□□ -0.25
CCNL1-226ENST00000631619 SRSF9Q13242 221 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCNL1-226ENST00000631619 LY6EQ16553 131 aa13.52□□□□□ -0.25
CCNL1-226ENST00000631619 KLK15Q9H2R5 256 aa13.52□□□□□ -0.25
CCNL1-226ENST00000631619 SPRY2O43597 315 aa13.51□□□□□ -0.25
CCNL1-226ENST00000631619 CD7P09564 240 aa13.51□□□□□ -0.25
CCNL1-226ENST00000631619 SFTA2Q6UW10 78 aa13.51□□□□□ -0.25
CCNL1-226ENST00000631619 RNF183Q96D59 192 aa13.51□□□□□ -0.25
CCNL1-226ENST00000631619 LINC00477Q96M19 166 aa13.51□□□□□ -0.25
CCNL1-226ENST00000631619 IGHV3-11P01762 117 aa13.51□□□□□ -0.25
CCNL1-226ENST00000631619 COX6B1P14854 86 aa13.51□□□□□ -0.25
CCNL1-226ENST00000631619 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.5□□□□□ -0.251e-7■■■■□ 20.9
CCNL1-226ENST00000631619 PKD1L2Q7Z442 2459 aa13.5□□□□□ -0.25
CCNL1-226ENST00000631619 PLEKHB2Q96CS7 222 aa13.5□□□□□ -0.25
CCNL1-226ENST00000631619 SBSPONQ8IVN8 264 aa13.5□□□□□ -0.25
CCNL1-226ENST00000631619 BAALCQ8WXS3 180 aa13.5□□□□□ -0.25
CCNL1-226ENST00000631619 PRORYQ9H606 182 aa13.5□□□□□ -0.25
CCNL1-226ENST00000631619 TRBV20-1A0A075B6N2 111 aa13.49□□□□□ -0.25
CCNL1-226ENST00000631619 IGHG2P01859 326 aa13.49□□□□□ -0.25
CCNL1-226ENST00000631619 OR10J6PQ8NGY7 276 aa13.49□□□□□ -0.25
CCNL1-226ENST00000631619 SUMO2P61956 95 aaKnown RBP13.49□□□□□ -0.25
CCNL1-226ENST00000631619 PIMREGQ9BSJ6 248 aa13.49□□□□□ -0.25
CCNL1-226ENST00000631619 CELSR2Q9HCU4 2923 aa13.49□□□□□ -0.25
CCNL1-226ENST00000631619 A8MWV9 139 aa13.48□□□□□ -0.25
CCNL1-226ENST00000631619 H3BUX3 64 aa13.48□□□□□ -0.25
CCNL1-226ENST00000631619 M0R381 172 aa13.48□□□□□ -0.25
CCNL1-226ENST00000631619 OVOL1O14753 267 aa13.48□□□□□ -0.25
CCNL1-226ENST00000631619 TCL1BO95988 128 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms