RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 SMIM20Q8N5G0 67 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 NAV2Q8IVL1 2488 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 AGRNO00468 2067 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 PSMB2P49721 201 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 MINOS1Q5TGZ0 78 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 SFTA2Q6UW10 78 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 RNF182Q8N6D2 247 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 MYOZ3Q8TDC0 251 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 MINOS1-NBL1R4GNA1 71 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 IGKV3D-20A0A0C4DH25 116 aa6.69□□□□□ -1.34
VCL-207ENST00000624354 CLEC3BP05452 202 aa6.69□□□□□ -1.34
VCL-207ENST00000624354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.69□□□□□ -1.34
VCL-207ENST00000624354 TRAV40A0A0B4J280 105 aa6.69□□□□□ -1.34
VCL-207ENST00000624354 ECSCRQ19T08 205 aa6.69□□□□□ -1.34
VCL-207ENST00000624354 TMEM78Q5T7P6 136 aa6.69□□□□□ -1.34
VCL-207ENST00000624354 C1orf122Q6ZSJ8 110 aa6.69□□□□□ -1.34
VCL-207ENST00000624354 PTH2Q96A98 100 aa6.69□□□□□ -1.34
VCL-207ENST00000624354 PSMG3-AS1Q96PY0 264 aa6.69□□□□□ -1.34
VCL-207ENST00000624354 IGHV3-66A0A0C4DH42 116 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 LOC107984156A0A0G2JMH3 177 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 MORN3Q6PF18 240 aaPredicted RBP6.68□□□□□ -1.34
VCL-207ENST00000624354 ARL17AQ8IVW1 177 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 Q8N9W7 124 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 FAM110DQ8TAY7 271 aaPredicted RBP6.68□□□□□ -1.34
VCL-207ENST00000624354 AGPAT4-IT1Q9H0P7 198 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 ZFAND3Q9H8U3 227 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 IGLV2-18A0A075B6J9 118 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 TRBV7-3A0A075B6L6 115 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 RPL32P62910 135 aaKnown RBP6.68□□□□□ -1.34
VCL-207ENST00000624354 LAGE3Q14657 143 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 FBXL19-AS1Q494R0 122 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 TEN1Q86WV5 123 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 CARD19Q96LW7 228 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 GAGE12JA6NER3 117 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 TMEM262E9PQX1 116 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 GAGE7O76087 117 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 TRGV3P03979 118 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 ZNF688P0C7X2 276 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 GAGE12FP0CL80 117 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 GAGE12GP0CL81 117 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 GAGE12IP0CL82 117 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 GAGE4Q13068 117 aa6.68□□□□□ -1.34
VCL-207ENST00000624354 MRPL35Q9NZE8 188 aaKnown RBP6.68□□□□□ -1.34
VCL-207ENST00000624354 IGHV3OR16-13A0A075B7E8 117 aa6.67□□□□□ -1.34
VCL-207ENST00000624354 IGHV3-74A0A0B4J1X5 117 aa6.67□□□□□ -1.34
VCL-207ENST00000624354 ANXA2RQ3ZCQ2 193 aa6.67□□□□□ -1.34
VCL-207ENST00000624354 SPANXN1Q5VSR9 72 aa6.67□□□□□ -1.34
VCL-207ENST00000624354 C11orf21Q9P2W6 132 aa6.67□□□□□ -1.34
VCL-207ENST00000624354 MTORP42345 2549 aa6.67□□□□□ -1.34
VCL-207ENST00000624354 CCL21O00585 134 aa6.67□□□□□ -1.34
VCL-207ENST00000624354 CLEC19AQ6UXS0 136 aa6.67□□□□□ -1.34
VCL-207ENST00000624354 ITPR2Q14571 2701 aa6.67□□□□□ -1.34
VCL-207ENST00000624354 NHLRC4P0CG21 123 aaPredicted RBP6.66□□□□□ -1.34
VCL-207ENST00000624354 METTL26Q96S19 204 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 GCN1Q92616 2671 aaKnown RBP6.66□□□□□ -1.34
VCL-207ENST00000624354 TRAV26-2A0A0B4J265 109 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 IGHV7-4-1A0A0J9YVY3 117 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 LINC01549A6NIU2 74 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 ATP6V0E1O15342 81 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 GAGE2BQ13066 116 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 GAGE2EQ4V326 116 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 LYRM7Q5U5X0 104 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 NRACQ8N912 160 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 MRPL53Q96EL3 112 aaKnown RBP6.66□□□□□ -1.34
VCL-207ENST00000624354 HIF1ANQ9NWT6 349 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 GAGE2DQ9UEU5 116 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 DOPEY1Q5JWR5 2465 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 A0A087WX48 190 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 IGHV3-49A0A0A0MS15 119 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 CLPSL1A2RUU4 121 aa6.66□□□□□ -1.34
VCL-207ENST00000624354 A8MWV9 139 aa6.65□□□□□ -1.34
VCL-207ENST00000624354 LINC01619G3V211 115 aa6.65□□□□□ -1.34
VCL-207ENST00000624354 PLNP26678 52 aa6.65□□□□□ -1.34
VCL-207ENST00000624354 ARL3P36405 182 aa6.65□□□□□ -1.34
VCL-207ENST00000624354 TTC32Q5I0X7 151 aa6.65□□□□□ -1.34
VCL-207ENST00000624354 EEF1AKMT3Q96AZ1 226 aa6.65□□□□□ -1.34
VCL-207ENST00000624354 RAX2Q96IS3 184 aa6.65□□□□□ -1.34
VCL-207ENST00000624354 CITED1Q99966 193 aa6.65□□□□□ -1.34
VCL-207ENST00000624354 TRAV8-2A0A0B4J237 113 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 CCDC179H3BU77 68 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 H3BVH4 76 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 NDUFV3P56181 108 aaKnown RBP6.65□□□□□ -1.35
VCL-207ENST00000624354 ZFP2Q6ZN57 461 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 CCDC140Q96MF4 163 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 KIR2DL4Q99706 377 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 TRBV20-1A0A075B6N2 111 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 MYMXA0A1B0GTQ4 84 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 RHODO00212 210 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 SRD5A1P18405 259 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 ZFP36P26651 326 aaKnown RBP6.65□□□□□ -1.35
VCL-207ENST00000624354 C11orf71Q6IPW1 123 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 C9orf47Q6ZRZ4 202 aa6.65□□□□□ -1.35
VCL-207ENST00000624354 NBPF19A0A087WUL8 3843 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 IGHV4-4A0A075B6R2 117 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 SNCGO76070 127 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 EFNA4P52798 201 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 KLK9Q2XQG4 91 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 BBC3Q96PG8 261 aaPredicted RBP6.64□□□□□ -1.35
VCL-207ENST00000624354 KLK9Q9UKQ9 250 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 ZFHX3Q15911 3703 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms