RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 C11orf72Q8NBR9 251 aa4.96□□□□□ -1.62
CASC3-205ENST00000577605 HIST1H2BAQ96A08 127 aa4.96□□□□□ -1.62
CASC3-205ENST00000577605 SH3BGRL3Q9H299 93 aa4.96□□□□□ -1.62
CASC3-205ENST00000577605 TREM1Q9NP99 234 aa4.96□□□□□ -1.62
CASC3-205ENST00000577605 EPDR1Q9UM22 224 aa4.96□□□□□ -1.62
CASC3-205ENST00000577605 KLF12Q9Y4X4 402 aa4.96□□□□□ -1.62
CASC3-205ENST00000577605 NBEAL2Q6ZNJ1 2754 aa4.96□□□□□ -1.62
CASC3-205ENST00000577605 G3V3Q6 166 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 GAGE7O76087 117 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 PRM2P04554 102 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 GAGE12FP0CL80 117 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 GAGE12GP0CL81 117 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 GAGE12IP0CL82 117 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 RAB5CP51148 216 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 HERV-K104P63124 156 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 Q75L30 129 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 CYB561D1Q8N8Q1 229 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 CYTL1Q9NRR1 136 aa4.95□□□□□ -1.62
CASC3-205ENST00000577605 KMT2CQ8NEZ4 4911 aaKnown RBP4.94□□□□□ -1.62
CASC3-205ENST00000577605 TRGV1A0A0A0MS02 117 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 TEX46H3BTG2 121 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 HMGB3O15347 200 aaKnown RBP4.94□□□□□ -1.62
CASC3-205ENST00000577605 BCL2L11O43521 198 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 IFNA7P01567 189 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 TPT1P13693 172 aaKnown RBP4.94□□□□□ -1.62
CASC3-205ENST00000577605 FLI1Q01543 452 aaPredicted RBP4.94□□□□□ -1.62
CASC3-205ENST00000577605 OR5I1Q13606 314 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 SOHLH1Q5JUK2 328 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 PIK3CD-AS1Q5SR53 167 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 TCTE3Q8IZS6 198 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 Q8TAT8 98 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 RASL10AQ92737 203 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 PTH2Q96A98 100 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 SDF2L1Q9HCN8 221 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 RPH3ALQ9UNE2 315 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 PSG8Q9UQ74 426 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 ZFP30Q9Y2G7 519 aa4.94□□□□□ -1.62
CASC3-205ENST00000577605 TRBV6-1A0A0K0K1D8 114 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 MAP1LC3B2A6NCE7 125 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 FABP5P3A8MUU1 101 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 GGTLC3B5MD39 225 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 M0R2P5 195 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 NUDT3O95989 172 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 PFN1P07737 140 aaKnown RBP4.93□□□□□ -1.62
CASC3-205ENST00000577605 PRB4P10163 310 aaPredicted RBP4.93□□□□□ -1.62
CASC3-205ENST00000577605 ZNF726P1Q15940 193 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 Q6ZTI0 123 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 COX8CQ7Z4L0 72 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 SH2D6Q7Z4S9 175 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 MBD3L1Q8WWY6 194 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 FMC1Q96HJ9 113 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 ZNF471Q9BX82 626 aaPredicted RBP4.93□□□□□ -1.62
CASC3-205ENST00000577605 MAP1LC3BQ9GZQ8 125 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 PRO0255Q9UI72 69 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 CBY1Q9Y3M2 126 aa4.93□□□□□ -1.62
CASC3-205ENST00000577605 TRAV26-1A0A087WT03 109 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 PCP4L1A6NKN8 68 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 FAM74A7A6NL05 159 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 PEX7O00628 323 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 ORM1P02763 201 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
CASC3-205ENST00000577605 TMEM183BQ1AE95 376 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 MUC21Q5SSG8 566 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 PRR9Q5T870 116 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 TMUB2Q71RG4 321 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 TMEM183AQ8IXX5 376 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 Q8N1X5 172 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 OR11H4Q8NGC9 324 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 SFT2D1Q8WV19 159 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 TXNDC17Q9BRA2 123 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 ALKBH7Q9BT30 221 aaPredicted RBP4.92□□□□□ -1.62
CASC3-205ENST00000577605 HHLA3Q9XRX5 114 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 PAM16Q9Y3D7 125 aa4.92□□□□□ -1.62
CASC3-205ENST00000577605 TRAV8-1A0A0A6YYK1 113 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 TRAV1-1A0A0B4J248 108 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 TRAV4A0A0B4J268 109 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 TRGV4A0A0C4DH28 118 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 IGHV3-16A0A0C4DH30 117 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 SMLR1H3BR10 107 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 K7EP13 123 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 GATCO43716 136 aaKnown RBP4.91□□□□□ -1.62
CASC3-205ENST00000577605 EIF3GO75821 320 aaKnown RBP eCLIP4.91□□□□□ -1.62
CASC3-205ENST00000577605 GCGP01275 180 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 IGLV2-11P01706 119 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 C1QBP02746 253 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 UBE2G1P62253 170 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 GNG5P63218 68 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 MRPL23Q16540 153 aaKnown RBP4.91□□□□□ -1.62
CASC3-205ENST00000577605 TTC32Q5I0X7 151 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 SSX7Q7RTT5 188 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 PRNTQ86SH4 94 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 FAM213BQ8TBF2 198 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 TVP23CQ96ET8 276 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 UPK3BQ9BT76 320 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 MDFICQ9P1T7 246 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 NAGKQ9UJ70 344 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 ICOSQ9Y6W8 199 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 DNAH7Q8WXX0 4024 aa4.91□□□□□ -1.62
CASC3-205ENST00000577605 AGRNO00468 2067 aa4.9□□□□□ -1.62
CASC3-205ENST00000577605 GAGE12JA6NER3 117 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms