RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PFN1P07737 140 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-211ENST00000569653 H2AFB1P0C5Y9 115 aa9.39□□□□□ -0.91
GTF3C1-211ENST00000569653 DNAH10OSP0CZ25 163 aa9.39□□□□□ -0.91
GTF3C1-211ENST00000569653 CCL20P78556 96 aa9.39□□□□□ -0.91
GTF3C1-211ENST00000569653 ALKAL2Q6UX46 152 aa9.39□□□□□ -0.91
GTF3C1-211ENST00000569653 SPXQ9BT56 116 aa9.39□□□□□ -0.91
GTF3C1-211ENST00000569653 VPS13BQ7Z7G8 4022 aa9.38□□□□□ -0.91
GTF3C1-211ENST00000569653 HERC1Q15751 4861 aa9.38□□□□□ -0.91
GTF3C1-211ENST00000569653 A0A1B0GV50 99 aa9.38□□□□□ -0.91
GTF3C1-211ENST00000569653 RAB5CP51148 216 aa9.38□□□□□ -0.91
GTF3C1-211ENST00000569653 CST9LP1Q5W188 147 aa9.38□□□□□ -0.91
GTF3C1-211ENST00000569653 Q86TA4 180 aa9.38□□□□□ -0.91
GTF3C1-211ENST00000569653 C11orf21Q9P2W6 132 aa9.38□□□□□ -0.91
GTF3C1-211ENST00000569653 TRAV34A0A0B4J273 112 aa9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 TRGV4A0A0C4DH28 118 aa9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 TYMSP04818 313 aa9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 GYPEP15421 78 aa9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 ZNF80P51504 273 aaPredicted RBP9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 UBE2G1P62253 170 aa9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 NEGR1Q7Z3B1 354 aa9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 FMC1Q96HJ9 113 aa9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 LINC00479Q96M42 142 aa9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 SCRT2Q9NQ03 307 aa9.37□□□□□ -0.91
GTF3C1-211ENST00000569653 TRAV1-1A0A0B4J248 108 aa9.36□□□□□ -0.91
GTF3C1-211ENST00000569653 PAGE4O60829 102 aa9.36□□□□□ -0.91
GTF3C1-211ENST00000569653 TRAV4A0A0B4J268 109 aa9.35□□□□□ -0.91
GTF3C1-211ENST00000569653 TEX46H3BTG2 121 aa9.35□□□□□ -0.91
GTF3C1-211ENST00000569653 M0R2P5 195 aa9.35□□□□□ -0.91
GTF3C1-211ENST00000569653 AKR1C3P42330 323 aa9.35□□□□□ -0.91
GTF3C1-211ENST00000569653 XGP55808 180 aa9.35□□□□□ -0.91
GTF3C1-211ENST00000569653 KRTAP10-1P60331 282 aa9.35□□□□□ -0.91
GTF3C1-211ENST00000569653 SLAQ13239 276 aa9.35□□□□□ -0.91
GTF3C1-211ENST00000569653 ZFP30Q9Y2G7 519 aa9.35□□□□□ -0.91
GTF3C1-211ENST00000569653 DNAH8Q96JB1 4490 aa9.34□□□□□ -0.91
GTF3C1-211ENST00000569653 A0A087WTM6 91 aa9.34□□□□□ -0.91
GTF3C1-211ENST00000569653 SRIP30626 198 aa9.34□□□□□ -0.91
GTF3C1-211ENST00000569653 MANBALQ9NQG1 85 aa9.34□□□□□ -0.91
GTF3C1-211ENST00000569653 TRBV6-1A0A0K0K1D8 114 aa9.33□□□□□ -0.92
GTF3C1-211ENST00000569653 FABP5P3A8MUU1 101 aa9.33□□□□□ -0.92
GTF3C1-211ENST00000569653 GATA1P15976 413 aaPredicted RBP9.33□□□□□ -0.92
GTF3C1-211ENST00000569653 LY96Q9Y6Y9 160 aa9.33□□□□□ -0.92
GTF3C1-211ENST00000569653 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-211ENST00000569653 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
GTF3C1-211ENST00000569653 LTAP01374 205 aa9.32□□□□□ -0.92
GTF3C1-211ENST00000569653 S100A9P06702 114 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-211ENST00000569653 COX8CQ7Z4L0 72 aa9.32□□□□□ -0.92
GTF3C1-211ENST00000569653 OR4C5Q8NGB2 326 aa9.32□□□□□ -0.92
GTF3C1-211ENST00000569653 LYPD6BQ8NI32 183 aa9.32□□□□□ -0.92
GTF3C1-211ENST00000569653 ZC2HC1AQ96GY0 325 aa9.32□□□□□ -0.92
GTF3C1-211ENST00000569653 MSRB1Q9NZV6 116 aa9.32□□□□□ -0.92
GTF3C1-211ENST00000569653 GNG13Q9P2W3 67 aa9.32□□□□□ -0.92
GTF3C1-211ENST00000569653 SCO2A0A1W2PP80 73 aa9.31□□□□□ -0.92
GTF3C1-211ENST00000569653 ORM1P02763 201 aa9.31□□□□□ -0.92
GTF3C1-211ENST00000569653 S100A4P26447 101 aaKnown RBP9.31□□□□□ -0.92
GTF3C1-211ENST00000569653 ERVFC1-1P60608 527 aa9.31□□□□□ -0.92
GTF3C1-211ENST00000569653 FAM162BQ5T6X4 162 aa9.31□□□□□ -0.92
GTF3C1-211ENST00000569653 TEX261Q6UWH6 196 aa9.31□□□□□ -0.92
GTF3C1-211ENST00000569653 C9orf85Q96MD7 179 aa9.31□□□□□ -0.92
GTF3C1-211ENST00000569653 B4DEV8 164 aa9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 C9JCJ5 164 aa9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 SH2D1AO60880 128 aa9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 IFNA1P01562 189 aa9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 ASIPP42127 132 aa9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 ZNF876PQ49A33 203 aa9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 CFAP126Q5VTH2 177 aa9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 PCNPQ8WW12 178 aaKnown RBP9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 TXNDC17Q9BRA2 123 aa9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 PGPEP1Q9NXJ5 209 aa9.3□□□□□ -0.92
GTF3C1-211ENST00000569653 IGKV3D-20A0A0C4DH25 116 aa9.29□□□□□ -0.92
GTF3C1-211ENST00000569653 PGPEP1LA6NFU8 196 aa9.29□□□□□ -0.92
GTF3C1-211ENST00000569653 RS1O15537 224 aa9.29□□□□□ -0.92
GTF3C1-211ENST00000569653 CRYGDP07320 174 aa9.29□□□□□ -0.92
GTF3C1-211ENST00000569653 RNASE3P12724 160 aaKnown RBP9.29□□□□□ -0.92
GTF3C1-211ENST00000569653 Q6ZSN1 163 aa9.29□□□□□ -0.92
GTF3C1-211ENST00000569653 Q8N3U1 123 aa9.29□□□□□ -0.92
GTF3C1-211ENST00000569653 PTH2Q96A98 100 aa9.29□□□□□ -0.92
GTF3C1-211ENST00000569653 FLG2Q5D862 2391 aaPredicted RBP9.29□□□□□ -0.92
GTF3C1-211ENST00000569653 IGHV3-73A0A0B4J1V6 119 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 LRCOL1A6NCL2 159 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 CIDEAO60543 219 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 TIRAPP58753 221 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 BLOC1S1P78537 153 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 HAMPP81172 84 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 ZNF674Q2M3X9 581 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 ZNF506Q5JVG8 444 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 CDPF1Q6NVV7 123 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 NFE4Q86UQ8 179 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 Q9UF83 564 aa9.28□□□□□ -0.92
GTF3C1-211ENST00000569653 KRBOX1C9JBD0 128 aa9.27□□□□□ -0.93
GTF3C1-211ENST00000569653 M0R036 132 aa9.27□□□□□ -0.93
GTF3C1-211ENST00000569653 EVI2AP22794 236 aa9.27□□□□□ -0.93
GTF3C1-211ENST00000569653 CRIP1P50238 77 aa9.27□□□□□ -0.93
GTF3C1-211ENST00000569653 LINC01559Q495D7 138 aa9.27□□□□□ -0.93
GTF3C1-211ENST00000569653 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
GTF3C1-211ENST00000569653 BAGE2Q86Y30 109 aa9.27□□□□□ -0.93
GTF3C1-211ENST00000569653 NHLRC2Q8NBF2 726 aa9.27□□□□□ -0.93
GTF3C1-211ENST00000569653 C11orf52Q96A22 123 aa9.27□□□□□ -0.93
GTF3C1-211ENST00000569653 IL36BQ9NZH7 164 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms