RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 TMEM170BQ5T4T1 132 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 CENPVL3A0A0U1RRI6 287 aa9.09□□□□□ -0.95
XRCC3-208ENST00000554811 ATP5LO75964 103 aa9.09□□□□□ -0.95
XRCC3-208ENST00000554811 SAMD13Q5VXD3 122 aa9.09□□□□□ -0.95
XRCC3-208ENST00000554811 GTSF1LQ9H1H1 148 aa9.09□□□□□ -0.95
XRCC3-208ENST00000554811 SRSF1Q07955 248 aaKnown RBP eCLIP9.09□□□□□ -0.95
XRCC3-208ENST00000554811 OR1N2Q8NGR9 330 aa9.09□□□□□ -0.95
XRCC3-208ENST00000554811 ZNF418Q8TF45 676 aaPredicted RBP9.09□□□□□ -0.95
XRCC3-208ENST00000554811 C20orf173Q96LM9 149 aa9.09□□□□□ -0.95
XRCC3-208ENST00000554811 A0A1B0GV72 72 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 H3BMG7 143 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 ZNF56Q15929 161 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 Q6ZS46 218 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 DPF1Q92782 380 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 RHPN1-AS1Q9BWJ2 59 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 ZFAND3Q9H8U3 227 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 RAB9AP51151 201 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 MAPKAPK5-AS1Q8N8E1 139 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 SIRPDQ9H106 197 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 A0A1W2PPM0 123 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 H3BRM9 83 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 FGF6P10767 208 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 Q8N8P6 123 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 ZNF479Q96JC4 524 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 NPFFR1Q9GZQ6 430 aa9.08□□□□□ -0.96
XRCC3-208ENST00000554811 KLHL30-AS1Q8NEE0 82 aa9.07□□□□□ -0.96
XRCC3-208ENST00000554811 MOB4Q9Y3A3 225 aa9.07□□□□□ -0.96
XRCC3-208ENST00000554811 TRAV8-2A0A0B4J237 113 aa9.07□□□□□ -0.96
XRCC3-208ENST00000554811 IGHV4-61A0A0C4DH41 118 aa9.07□□□□□ -0.96
XRCC3-208ENST00000554811 ZNF815PA8K554 130 aa9.07□□□□□ -0.96
XRCC3-208ENST00000554811 PSMG4Q5JS54 123 aa9.07□□□□□ -0.96
XRCC3-208ENST00000554811 C11orf44Q8N8P7 122 aa9.07□□□□□ -0.96
XRCC3-208ENST00000554811 ETDBQ3ZM63 59 aa9.07□□□□□ -0.96
XRCC3-208ENST00000554811 SH2D6Q7Z4S9 175 aa9.07□□□□□ -0.96
XRCC3-208ENST00000554811 MRPL16Q9NX20 251 aaKnown RBP9.07□□□□□ -0.96
XRCC3-208ENST00000554811 KLK9Q9UKQ9 250 aa9.07□□□□□ -0.96
XRCC3-208ENST00000554811 K7EP34 96 aa9.06□□□□□ -0.96
XRCC3-208ENST00000554811 SCGB1C2P0DMR2 95 aa9.06□□□□□ -0.96
XRCC3-208ENST00000554811 CCL19Q99731 98 aa9.06□□□□□ -0.96
XRCC3-208ENST00000554811 TRAV26-1A0A087WT03 109 aa9.06□□□□□ -0.96
XRCC3-208ENST00000554811 TRAV21A0A0B4J279 112 aa9.06□□□□□ -0.96
XRCC3-208ENST00000554811 CLPSL1A2RUU4 121 aa9.06□□□□□ -0.96
XRCC3-208ENST00000554811 SUMO2P61956 95 aaKnown RBP9.06□□□□□ -0.96
XRCC3-208ENST00000554811 C2orf66Q6UXQ4 117 aa9.06□□□□□ -0.96
XRCC3-208ENST00000554811 ZNF48Q96MX3 618 aaPredicted RBP9.06□□□□□ -0.96
XRCC3-208ENST00000554811 TRBV7-1A0A0A6YYK4 115 aa9.06□□□□□ -0.96
XRCC3-208ENST00000554811 CELSR2Q9HCU4 2923 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 TRBV6-1A0A0K0K1D8 114 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 TEX48A0A1B0GUV7 120 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 OOSP1A8MZH6 123 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 C10orf99Q6UWK7 81 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 ADAMTSL5Q6ZMM2 481 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 C5orf56Q8N8D9 126 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 UCNP55089 124 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 HERV-K104P63124 156 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 LINC01559Q495D7 138 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 SMIM2Q9BVW6 85 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 CFAP46Q8IYW2 2715 aa9.05□□□□□ -0.96
XRCC3-208ENST00000554811 IGHV4-39P01824 125 aa9.04□□□□□ -0.96
XRCC3-208ENST00000554811 SLC25A16P16260 332 aa9.04□□□□□ -0.96
XRCC3-208ENST00000554811 LMO4P61968 165 aa9.04□□□□□ -0.96
XRCC3-208ENST00000554811 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
XRCC3-208ENST00000554811 C11orf71Q6IPW1 123 aa9.04□□□□□ -0.96
XRCC3-208ENST00000554811 A0A1B0GWB2 263 aa9.04□□□□□ -0.96
XRCC3-208ENST00000554811 CRYBA4P53673 196 aa9.04□□□□□ -0.96
XRCC3-208ENST00000554811 BEX4Q9NWD9 120 aaPredicted RBP9.04□□□□□ -0.96
XRCC3-208ENST00000554811 WFDC2Q14508 124 aa9.04□□□□□ -0.96
XRCC3-208ENST00000554811 Q1RN00 199 aa9.04□□□□□ -0.96
XRCC3-208ENST00000554811 Q8N6K4 173 aa9.04□□□□□ -0.96
XRCC3-208ENST00000554811 SS18L2Q9UHA2 77 aa9.04□□□□□ -0.96
XRCC3-208ENST00000554811 PAX2Q02962 417 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 C9orf139Q6ZV77 190 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 PIMREGQ9BSJ6 248 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 U3KQK5 164 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 IGHV3OR16-12A0A075B7B8 117 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 KNCNA6PVL3 124 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 DUSP14O95147 198 aaKnown RBP9.03□□□□□ -0.96
XRCC3-208ENST00000554811 HLA-DRB4P13762 266 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 PSMB2P49721 201 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 SPINK13Q1W4C9 94 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 TP53TG1Q9Y2A0 90 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 HLA-DRB4X5D2U9 266 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 PRADC1Q9BSG0 188 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 DPH3P1Q9H4G8 78 aa9.03□□□□□ -0.96
XRCC3-208ENST00000554811 IGHV1-69DA0A0B4J2H0 117 aa9.02□□□□□ -0.96
XRCC3-208ENST00000554811 IGHV1-69P01742 117 aa9.02□□□□□ -0.96
XRCC3-208ENST00000554811 RNASE13Q5GAN3 156 aaKnown RBP9.02□□□□□ -0.96
XRCC3-208ENST00000554811 PGPEP1Q9NXJ5 209 aa9.02□□□□□ -0.96
XRCC3-208ENST00000554811 NPC2P61916 151 aa9.02□□□□□ -0.97
XRCC3-208ENST00000554811 CEND1Q8N111 149 aa9.02□□□□□ -0.97
XRCC3-208ENST00000554811 OPRPNQ99935 248 aaPredicted RBP9.02□□□□□ -0.97
XRCC3-208ENST00000554811 ZFHX3Q15911 3703 aa9.02□□□□□ -0.97
XRCC3-208ENST00000554811 IGHV7-4-1A0A0J9YVY3 117 aa9.02□□□□□ -0.97
XRCC3-208ENST00000554811 H7C1H1 209 aa9.02□□□□□ -0.97
XRCC3-208ENST00000554811 DUX3Q96PT4 197 aa9.02□□□□□ -0.97
XRCC3-208ENST00000554811 HECTD1Q9ULT8 2610 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 PRSS29PA6NIE9 313 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 IGHV4-30-2A0A087WSY4 118 aa9.01□□□□□ -0.97
XRCC3-208ENST00000554811 PRM2P04554 102 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms